| public getListOfUnitDefinitions ( ) : ListOfUnitDefinitions | ||
| return | ListOfUnitDefinitions | |
public void test_UnitDefinition_parent_create()
{
Model m = new Model(2,4);
UnitDefinition ud = m.createUnitDefinition();
ListOf lo = m.getListOfUnitDefinitions();
assertTrue( lo == m.getUnitDefinition(0).getParentSBMLObject() );
assertTrue( lo == ud.getParentSBMLObject() );
assertTrue( m == lo.getParentSBMLObject() );
}
/// <summary>
/// [ UnitDefinitionStruct ]
/// [[ Id , Name , [ UnitStruct ] ]]
/// </summary>
/// <param name="aSBMLmodel"></param>
/// <returns></returns>
public static List<UnitDefinitionStruct> getUnitDefinition(Model aSBMLmodel)
{
List<UnitDefinitionStruct> list = new List<UnitDefinitionStruct>();
ListOfUnitDefinitions listOfUnitDefinitions = aSBMLmodel.getListOfUnitDefinitions();
for (int i = 0; i < listOfUnitDefinitions.size(); i++ )
{
UnitDefinition anUnitDefinition = aSBMLmodel.getUnitDefinition(i);
string anId = anUnitDefinition.getId();
string aName = anUnitDefinition.getName();
List<UnitStruct> unitList = new List<UnitStruct>();
ListOfUnits listOfUnits = anUnitDefinition.getListOfUnits();
for (int j = 0; j < listOfUnits.size(); j++)
{
Unit anUnit = anUnitDefinition.getUnit(j);
int anUnitKind = anUnit.getKind();
string aKind = libsbml.libsbml.UnitKind_toString( anUnitKind );
int anExponent = anUnit.getExponent();
int aScale = anUnit.getScale();
double aMultiplier = anUnit.getMultiplier();
double anOffset = anUnit.getOffset();
UnitStruct unit = new UnitStruct(
aKind,
anExponent,
aScale,
aMultiplier,
anOffset );
unitList.Add( unit );
}
UnitDefinitionStruct unitDefinition = new UnitDefinitionStruct(
anId,
aName,
unitList );
list.Add(unitDefinition);
}
return list;
}
public void test_UnitDefinition_parent_add()
{
UnitDefinition ia = new UnitDefinition(2,4);
Model m = new Model(2,4);
ia.setId("u");
ia.createUnit();
m.addUnitDefinition(ia);
ia = null;
ListOf lo = m.getListOfUnitDefinitions();
assertTrue( lo == m.getUnitDefinition(0).getParentSBMLObject() );
assertTrue( m == lo.getParentSBMLObject() );
}
public void test_UnitDefinition_ancestor_create()
{
Model m = new Model(2,4);
UnitDefinition ud = m.createUnitDefinition();
ListOf lo = m.getListOfUnitDefinitions();
assertTrue( ud.getAncestorOfType(libsbml.SBML_MODEL) == m );
assertTrue( ud.getAncestorOfType(libsbml.SBML_LIST_OF) == lo );
assertTrue( ud.getAncestorOfType(libsbml.SBML_DOCUMENT) == null );
assertTrue( ud.getAncestorOfType(libsbml.SBML_EVENT) == null );
UnitDefinition obj = m.getUnitDefinition(0);
assertTrue( obj.getAncestorOfType(libsbml.SBML_MODEL) == m );
assertTrue( obj.getAncestorOfType(libsbml.SBML_LIST_OF) == lo );
assertTrue( obj.getAncestorOfType(libsbml.SBML_DOCUMENT) == null );
assertTrue( obj.getAncestorOfType(libsbml.SBML_EVENT) == null );
}
public void test_UnitDefinition_ancestor_add()
{
UnitDefinition ia = new UnitDefinition(2,4);
Model m = new Model(2,4);
ia.setId("u");
ia.createUnit();
m.addUnitDefinition(ia);
ia = null;
ListOf lo = m.getListOfUnitDefinitions();
UnitDefinition obj = m.getUnitDefinition(0);
assertTrue( obj.getAncestorOfType(libsbml.SBML_MODEL) == m );
assertTrue( obj.getAncestorOfType(libsbml.SBML_LIST_OF) == lo );
assertTrue( obj.getAncestorOfType(libsbml.SBML_DOCUMENT) == null );
assertTrue( obj.getAncestorOfType(libsbml.SBML_EVENT) == null );
}
public void test_ReadSBML_notes_ListOf()
{
SBase sb;
string s = wrapSBML_L2v1("<listOfFunctionDefinitions>" +
" <notes>My Functions</notes>" +
" <functionDefinition/>" +
"</listOfFunctionDefinitions>" +
"<listOfUnitDefinitions>" +
" <notes>My Units</notes>" +
" <unitDefinition/>" +
"</listOfUnitDefinitions>" +
"<listOfCompartments>" +
" <notes>My Compartments</notes>" +
" <compartment/>" +
"</listOfCompartments>");
D = libsbml.readSBMLFromString(s);
M = D.getModel();
assertTrue( M != null );
sb = M.getListOfFunctionDefinitions();
assertEquals( true, sb.isSetNotes() );
string notes = sb.getNotes().getChild(0).getCharacters();
assertTrue( ( "My Functions" != notes ) == false );
sb = M.getListOfUnitDefinitions();
assertEquals( true, sb.isSetNotes() );
notes = sb.getNotes().getChild(0).getCharacters();
assertTrue( ( "My Units" != notes ) == false );
sb = M.getListOfCompartments();
assertEquals( true, sb.isSetNotes() );
notes = sb.getNotes().getChild(0).getCharacters();
assertTrue( ( "My Compartments" != notes ) == false );
}
public void test_ReadSBML_metaid_ListOf()
{
SBase sb;
string s = wrapSBML_L2v1("<listOfFunctionDefinitions metaid='lofd'/>" +
"<listOfUnitDefinitions metaid='loud'/>" +
"<listOfCompartments metaid='loc'/>" +
"<listOfSpecies metaid='los'/>" +
"<listOfParameters metaid='lop'/>" +
"<listOfRules metaid='lor'/>" +
"<listOfReactions metaid='lorx'/>" +
"<listOfEvents metaid='loe'/>");
D = libsbml.readSBMLFromString(s);
M = D.getModel();
assertTrue( M != null );
sb = M.getListOfFunctionDefinitions();
assertEquals( true, sb.isSetMetaId() );
assertTrue(( "lofd" == sb.getMetaId() ));
sb = M.getListOfUnitDefinitions();
assertEquals( true, sb.isSetMetaId() );
assertTrue(( "loud" == sb.getMetaId() ));
sb = M.getListOfCompartments();
assertEquals( true, sb.isSetMetaId() );
assertTrue(( "loc" == sb.getMetaId() ));
sb = M.getListOfSpecies();
assertEquals( true, sb.isSetMetaId() );
assertTrue(( "los" == sb.getMetaId() ));
sb = M.getListOfParameters();
assertEquals( true, sb.isSetMetaId() );
assertTrue(( "lop" == sb.getMetaId() ));
sb = M.getListOfRules();
assertEquals( true, sb.isSetMetaId() );
assertTrue(( "lor" == sb.getMetaId() ));
sb = M.getListOfReactions();
assertEquals( true, sb.isSetMetaId() );
assertTrue(( "lorx" == sb.getMetaId() ));
sb = M.getListOfEvents();
assertEquals( true, sb.isSetMetaId() );
assertTrue(( "loe" == sb.getMetaId() ));
}
