| public getListOfFunctionDefinitions ( ) : ListOfFunctionDefinitions | ||
| return | ListOfFunctionDefinitions | |
public void test_FunctionDefinition_parent_create()
{
Model m = new Model(2,4);
FunctionDefinition fd = m.createFunctionDefinition();
ListOf lo = m.getListOfFunctionDefinitions();
assertTrue( lo == m.getFunctionDefinition(0).getParentSBMLObject() );
assertTrue( lo == fd.getParentSBMLObject() );
assertTrue( m == lo.getParentSBMLObject() );
}
/// <summary>
/// [ FunctionDefinitionStruct ]
/// [[ Id , Name , String ]]
/// <param name="aSBMLmodel"></param>
/// </summary>
public static List<FunctionDefinitionStruct> getFunctionDefinition(Model aSBMLmodel)
{
List<FunctionDefinitionStruct> list = new List<FunctionDefinitionStruct>();
ListOfFunctionDefinitions functionDefinitions = aSBMLmodel.getListOfFunctionDefinitions();
for (int i = 0; i < functionDefinitions.size(); i++ )
{
FunctionDefinition aFunctionDefinition = aSBMLmodel.getFunctionDefinition(i);
string anId_FD = aFunctionDefinition.getId();
string aName_FD = aFunctionDefinition.getName();
ASTNode anASTNode_FD = aFunctionDefinition.getMath();
string aString_FD = libsbml.libsbml.formulaToString(anASTNode_FD );
FunctionDefinitionStruct fd = new FunctionDefinitionStruct(
anId_FD,
aName_FD,
aString_FD);
list.Add(fd);
}
return list;
}
public void test_FunctionDefinition_parent_add()
{
FunctionDefinition fd = new FunctionDefinition(2,4);
Model m = new Model(2,4);
fd.setId("fd");
fd.setMath(libsbml.parseFormula("l"));
m.addFunctionDefinition(fd);
fd = null;
ListOf lo = m.getListOfFunctionDefinitions();
assertTrue( lo == m.getFunctionDefinition(0).getParentSBMLObject() );
assertTrue( m == lo.getParentSBMLObject() );
}
public void test_FunctionDefinition_ancestor_create()
{
Model m = new Model(2,4);
FunctionDefinition fd = m.createFunctionDefinition();
ListOf lo = m.getListOfFunctionDefinitions();
assertTrue( fd.getAncestorOfType(libsbml.SBML_MODEL) == m );
assertTrue( fd.getAncestorOfType(libsbml.SBML_LIST_OF) == lo );
assertTrue( fd.getAncestorOfType(libsbml.SBML_DOCUMENT) == null );
assertTrue( fd.getAncestorOfType(libsbml.SBML_EVENT) == null );
FunctionDefinition obj = m.getFunctionDefinition(0);
assertTrue( obj.getAncestorOfType(libsbml.SBML_MODEL) == m );
assertTrue( obj.getAncestorOfType(libsbml.SBML_LIST_OF) == lo );
assertTrue( obj.getAncestorOfType(libsbml.SBML_DOCUMENT) == null );
assertTrue( obj.getAncestorOfType(libsbml.SBML_EVENT) == null );
}
public void test_FunctionDefinition_ancestor_add()
{
FunctionDefinition fd = new FunctionDefinition(2,4);
Model m = new Model(2,4);
fd.setId("fd");
fd.setMath(libsbml.parseFormula("l"));
m.addFunctionDefinition(fd);
fd = null;
ListOf lo = m.getListOfFunctionDefinitions();
FunctionDefinition obj = m.getFunctionDefinition(0);
assertTrue( obj.getAncestorOfType(libsbml.SBML_MODEL) == m );
assertTrue( obj.getAncestorOfType(libsbml.SBML_LIST_OF) == lo );
assertTrue( obj.getAncestorOfType(libsbml.SBML_DOCUMENT) == null );
assertTrue( obj.getAncestorOfType(libsbml.SBML_EVENT) == null );
}
public void test_ReadSBML_notes_ListOf()
{
SBase sb;
string s = wrapSBML_L2v1("<listOfFunctionDefinitions>" +
" <notes>My Functions</notes>" +
" <functionDefinition/>" +
"</listOfFunctionDefinitions>" +
"<listOfUnitDefinitions>" +
" <notes>My Units</notes>" +
" <unitDefinition/>" +
"</listOfUnitDefinitions>" +
"<listOfCompartments>" +
" <notes>My Compartments</notes>" +
" <compartment/>" +
"</listOfCompartments>");
D = libsbml.readSBMLFromString(s);
M = D.getModel();
assertTrue( M != null );
sb = M.getListOfFunctionDefinitions();
assertEquals( true, sb.isSetNotes() );
string notes = sb.getNotes().getChild(0).getCharacters();
assertTrue( ( "My Functions" != notes ) == false );
sb = M.getListOfUnitDefinitions();
assertEquals( true, sb.isSetNotes() );
notes = sb.getNotes().getChild(0).getCharacters();
assertTrue( ( "My Units" != notes ) == false );
sb = M.getListOfCompartments();
assertEquals( true, sb.isSetNotes() );
notes = sb.getNotes().getChild(0).getCharacters();
assertTrue( ( "My Compartments" != notes ) == false );
}
public void test_ReadSBML_metaid_ListOf()
{
SBase sb;
string s = wrapSBML_L2v1("<listOfFunctionDefinitions metaid='lofd'/>" +
"<listOfUnitDefinitions metaid='loud'/>" +
"<listOfCompartments metaid='loc'/>" +
"<listOfSpecies metaid='los'/>" +
"<listOfParameters metaid='lop'/>" +
"<listOfRules metaid='lor'/>" +
"<listOfReactions metaid='lorx'/>" +
"<listOfEvents metaid='loe'/>");
D = libsbml.readSBMLFromString(s);
M = D.getModel();
assertTrue( M != null );
sb = M.getListOfFunctionDefinitions();
assertEquals( true, sb.isSetMetaId() );
assertTrue(( "lofd" == sb.getMetaId() ));
sb = M.getListOfUnitDefinitions();
assertEquals( true, sb.isSetMetaId() );
assertTrue(( "loud" == sb.getMetaId() ));
sb = M.getListOfCompartments();
assertEquals( true, sb.isSetMetaId() );
assertTrue(( "loc" == sb.getMetaId() ));
sb = M.getListOfSpecies();
assertEquals( true, sb.isSetMetaId() );
assertTrue(( "los" == sb.getMetaId() ));
sb = M.getListOfParameters();
assertEquals( true, sb.isSetMetaId() );
assertTrue(( "lop" == sb.getMetaId() ));
sb = M.getListOfRules();
assertEquals( true, sb.isSetMetaId() );
assertTrue(( "lor" == sb.getMetaId() ));
sb = M.getListOfReactions();
assertEquals( true, sb.isSetMetaId() );
assertTrue(( "lorx" == sb.getMetaId() ));
sb = M.getListOfEvents();
assertEquals( true, sb.isSetMetaId() );
assertTrue(( "loe" == sb.getMetaId() ));
}