private void SetDefaults(IsobaricLabelingDefault def)
{
table.Clear();
for (int i = 0; i < def.Count; i++)
{
DataRow2 row = table.NewRow();
row[0] = def.GetInternalLabel(i);
row[1] = def.GetTerminalLabel(i);
row[2] = 0d;
row[3] = 0d;
row[4] = 0d;
row[5] = 0d;
row[6] = def.IsLikelyTmtLike(i);
table.AddRow(row);
}
tableView1.Invalidate(true);
}
private void TestFile(int minEntry, int maxEntry)
{
Regex nameRegex = !string.IsNullOrEmpty(identifierParseRule) ? new Regex(identifierParseRule) : null;
Regex descriptionRegex = !string.IsNullOrEmpty(descriptionParseRule) ? new Regex(descriptionParseRule) : null;
Regex taxonomyRegex = !string.IsNullOrEmpty(taxonomyParseRule) ? new Regex(taxonomyParseRule) : null;
Regex variationRegex = !string.IsNullOrEmpty(variationParseRule) ? new Regex(variationParseRule) : null;
Regex modificationRegex = !string.IsNullOrEmpty(modificationParseRule) ? new Regex(modificationParseRule) : null;
string[] headers;
string[] sequences;
GetDataFromFile(filePath, minEntry, maxEntry, out headers, out sequences);
tableModel.Clear();
for (int i = 0; i < headers.Length; i++)
{
DataRow2 r = tableModel.NewRow();
string header = headers[i];
r["Sequence"] = sequences[i];
r["Header"] = header;
if (nameRegex != null)
{
r["Identifier"] = nameRegex.Match(header).Groups[1].ToString();
}
if (descriptionRegex != null)
{
r["Description"] = descriptionRegex.Match(header).Groups[1].ToString();
}
if (taxonomyRegex != null)
{
r["Taxonomy ID"] = taxonomyRegex.Match(header).Groups[1].ToString();
}
if (variationRegex != null)
{
r["Variation"] = variationRegex.Match(header).Groups[1].ToString();
}
if (modificationRegex != null)
{
r["Modification"] = modificationRegex.Match(header).Groups[1].ToString();
}
tableModel.AddRow(r);
}
mainTable.Invalidate(true);
}
