public PhosphoRSConfig() { fragmentMassTolerance = 0.5; scoreNLToo = "true"; phosphorylationSymbol = 1; maxIsoformCount = 2000; maxPTMCount = 20; maxPackageSize = 3000; scoredAA = new phosphoRS.AminoAcidModification(phosphorylationSymbol.ToString()[0], "Phosphorylation", "Pho", "H3PO4", 79.966331, 97.976896, phosphoRS.AminoAcidSequence.ParseAASequence("STY")); pwizMod = new proteome.Modification("H1P1O3"); }