C# (CSharp) pwiz.CLI.proteome Modification Beispiele

Beispiel #1

Datei: PTMAttestationForm.cs Projekt: zrolfs/pwiz

            public PhosphoRSConfig()
            {
                fragmentMassTolerance = 0.5;
                scoreNLToo            = "true";
                phosphorylationSymbol = 1;
                maxIsoformCount       = 2000;
                maxPTMCount           = 20;
                maxPackageSize        = 3000;

                scoredAA = new phosphoRS.AminoAcidModification(phosphorylationSymbol.ToString()[0], "Phosphorylation", "Pho", "H3PO4", 79.966331, 97.976896, phosphoRS.AminoAcidSequence.ParseAASequence("STY"));
                pwizMod  = new proteome.Modification("H1P1O3");
            }

Beispiel #2

Datei: PTMAttestationForm.cs Projekt: lgatto/proteowizard

            public PhosphoRSConfig()
            {
                fragmentMassTolerance = 0.5;
                scoreNLToo = "true";
                phosphorylationSymbol = 1;
                maxIsoformCount = 2000;
                maxPTMCount = 20;
                maxPackageSize = 3000;

                scoredAA = new phosphoRS.AminoAcidModification(phosphorylationSymbol.ToString()[0], "Phosphorylation", "Pho", "H3PO4", 79.966331, 97.976896, phosphoRS.AminoAcidSequence.ParseAASequence("STY"));
                pwizMod = new proteome.Modification("H1P1O3");
            }