/// <summary> /// Gets the dimension of a species. It is set by it's one substanceUnits attribute /// or by the substanceUnits definition of the Model. /// </summary> private IDimension GetDimension(Species s, Model model) { var substanceUnits = s.isSetSubstanceUnits() ? s.getSubstanceUnits() : model.getSubstanceUnits(); IDimension amountDimension = null; if (_sbmlInformation.MobiDimension.ContainsKey(substanceUnits)) { amountDimension = _sbmlInformation.MobiDimension[substanceUnits]; } if (amountDimension == null) { return(null); } if (_moBiDimensionFactory.Dimensions.All(dim => dim.Name != amountDimension.Name)) { _moBiDimensionFactory.AddDimension(amountDimension); } return(amountDimension); }
public void test_L3_Model_createWithNS() { XMLNamespaces xmlns = new XMLNamespaces(); xmlns.add( "http://www.sbml.org", "testsbml"); SBMLNamespaces sbmlns = new SBMLNamespaces(3,1); sbmlns.addNamespaces(xmlns); Model m = new Model(sbmlns); assertTrue( m.getTypeCode() == libsbml.SBML_MODEL ); assertTrue( m.getMetaId() == "" ); assertTrue( m.getNotes() == null ); assertTrue( m.getAnnotation() == null ); assertTrue( m.getLevel() == 3 ); assertTrue( m.getVersion() == 1 ); assertTrue( m.getNamespaces() != null ); assertTrue( m.getNamespaces().getLength() == 2 ); assertTrue( m.getId() == "" ); assertTrue( m.getName() == "" ); assertTrue( m.getSubstanceUnits() == "" ); assertTrue( m.getTimeUnits() == "" ); assertTrue( m.getVolumeUnits() == "" ); assertTrue( m.getAreaUnits() == "" ); assertTrue( m.getLengthUnits() == "" ); assertTrue( m.getConversionFactor() == "" ); assertEquals( false, m.isSetId() ); assertEquals( false, m.isSetName() ); assertEquals( false, m.isSetSubstanceUnits() ); assertEquals( false, m.isSetTimeUnits() ); assertEquals( false, m.isSetVolumeUnits() ); assertEquals( false, m.isSetAreaUnits() ); assertEquals( false, m.isSetLengthUnits() ); assertEquals( false, m.isSetConversionFactor() ); m = null; }
private string GetUnit(Species s, Model model) { return(s.isSetSubstanceUnits() ? s.getSubstanceUnits() : model.getSubstanceUnits()); }