protected ReactionInfo(String name)
{
_name = name;
_reactants = new List <SpeciesDescription>();
_products = new List <SpeciesDescription>();
_rate = null;
_delay = null;
}
public void AddExpression(NumericExpressionTree expression)
{
if (!_model._expressions.ContainsKey(expression))
{
if ((expression.Name != null) && _model.Expressions.Any(net => net.Name == expression.Name))
{
throw new ArgumentException("Expression '" + expression.Name + "' already exists in the model.");
}
_model._expressions.Add(expression, expression);
}
}
public void AddAction(TargetReference target, NumericExpressionTree expression)
{
_event.Statements.Add(new StatementInfo(target, expression));
}
public StatementInfo(TargetReference target, NumericExpressionTree expression)
{
Target = target;
Expression = expression;
}
public SpeciesDescription(String name, int initialPopulation, LocaleInfo locale)
{
_name = name;
_locale = locale;
_initialPopulation = new NumericExpressionTree(new Constant(initialPopulation));
}
public SpeciesDescription(String name, NumericExpressionTree initialPopulation, LocaleInfo locale)
{
_name = name;
_locale = locale;
_initialPopulation = initialPopulation;
}
public SpeciesDescription(String name)
{
_name = name;
_locale = null;
_initialPopulation = new NumericExpressionTree(new Constant(0.0f));
}
public void SetDelay(NumericExpressionTree expressionTree)
{
_reaction._delay = expressionTree;
}
public void SetRate(NumericExpressionTree expressionTree)
{
_reaction._rate = expressionTree;
}
public ObservableInfo(NumericExpressionTree observableExpression)
{
_name = String.Empty;
_expression = observableExpression;
}
public ObservableInfo(String name, NumericExpressionTree observableExpression)
{
_name = name;
_expression = observableExpression;
}