private void ProteaseSpecificUpdate(object sender, SelectionChangedEventArgs e) { string proteaseName = ((Protease)ProteaseComboBox.SelectedItem).Name; MissedCleavagesTextBox.IsEnabled = !proteaseName.Equals("top-down"); if (AutomaticallyAskAndOrUpdateParametersBasedOnProtease) { switch (proteaseName) { case "non-specific": if (UpdateGUISettings.UseNonSpecificRecommendedSettings()) { MaxPeptideLengthTextBox.Text = "25"; } break; case "top-down": if (UpdateGUISettings.UseTopDownRecommendedSettings()) { //many variables are not present in the calibrate task gui, but we modify them when saving //uncheck all variable mods foreach (var mod in VariableModTypeForTreeViewObservableCollection) { mod.Use = false; } } break; case "Arg-C": if (UpdateGUISettings.UseArgCRecommendedSettings()) { ProteaseComboBox.SelectedItem = ProteaseDictionary.Dictionary["trypsin"]; } break; case "chymotrypsin (don't cleave before proline)": case "chymotrypsin (cleave before proline)": { if (UpdateGUISettings.UseChymotrypsinRecommendedSettings()) { MissedCleavagesTextBox.Text = "3"; } } break; case "elastase": { if (UpdateGUISettings.UseElastaseRecommendedSettings()) { MissedCleavagesTextBox.Text = "16"; } } break; //nothing to change for semi-trypsin default: break; } } }
private void ProteaseSpecificUpdate(object sender, SelectionChangedEventArgs e) { string proteaseName = ((Protease)ProteaseComboBox.SelectedItem).Name; MissedCleavagesTextBox.IsEnabled = !proteaseName.Equals("top-down"); if (AutomaticallyAskAndOrUpdateParametersBasedOnProtease) { switch (proteaseName) { case "non-specific": if (UpdateGUISettings.UseNonSpecificRecommendedSettings()) { MaxPeptideLengthTextBox.Text = "25"; } break; case "top-down": if (UpdateGUISettings.UseTopDownRecommendedSettings()) { UseProvidedPrecursor.IsChecked = false; DeconvolutionMaxAssumedChargeStateTextBox.Text = "60"; TrimMsMs.IsChecked = false; //uncheck all variable mods foreach (var mod in VariableModTypeForTreeViewObservableCollection) { mod.Use = false; } //clear GPTMD mods and replace them with a subset foreach (var mod in GptmdModTypeForTreeViewObservableCollection) { mod.Use = false; } //populate the recommended mods foreach (var mod in UpdateGUISettings.TopDownModsForGPTMD) { ModTypeForTreeView theModType = GptmdModTypeForTreeViewObservableCollection.FirstOrDefault(b => b.DisplayName.Equals(mod.Item1)); if (theModType != null) { var theMod = theModType.Children.FirstOrDefault(b => b.ModName.Equals(mod.Item2)); if (theMod != null) { theMod.Use = true; } } } } break; case "Arg-C": if (UpdateGUISettings.UseArgCRecommendedSettings()) { ProteaseComboBox.SelectedItem = ProteaseDictionary.Dictionary["trypsin"]; } break; case "chymotrypsin (don't cleave before proline)": case "chymotrypsin (cleave before proline)": { if (UpdateGUISettings.UseChymotrypsinRecommendedSettings()) { MissedCleavagesTextBox.Text = "3"; } } break; case "elastase": { if (UpdateGUISettings.UseElastaseRecommendedSettings()) { MissedCleavagesTextBox.Text = "16"; } } break; //nothing to change for semi-trypsin default: break; } } }