public MsMsFragmentAlgorithm( IEventAggregator eventAggregator, IMsMsSpectrumSelection msmsSpectrumSelection, ISmoothing smoothing, MsMsFragmentAnalyzer msmsFragmentAnalyzer, DeuterationResultGenerator deuterationResultGenerator, IServiceLocator serviceLocator) { _eventAggregator = eventAggregator; this.deuterationResultGenerator = deuterationResultGenerator; this.msmsSpectrumSelection = msmsSpectrumSelection; _smoothing = smoothing; this.msmsFragmentAnalyzer = msmsFragmentAnalyzer; _serviceLocator = serviceLocator; ProcessingSteps.Add(msmsSpectrumSelection); ProcessingSteps.Add(_smoothing); ProcessingSteps.Add(msmsFragmentAnalyzer); }
public LabelAmountAlgorithm( IEventAggregator eventAggregator, IXicSelection xicSelection, IChromatographicPeakDetection chromatographicPeakDetection, XicPeakPicker xicPeakPicker, ISpectrumSelection spectrumSelection, ISpectralPeakDetection spectralPeakDetection, IsotopicProfileFinder isotopicProfileFinder, LabelAmountCalculator labelAmountCalculator, ISmoothing xicSmoothing, ISmoothing spectrumSmoothing, DeuterationResultGenerator deuterationResultGenerator, IServiceLocator serviceLocator) : base() { _eventAggregator = eventAggregator; _xicSelection = xicSelection; _chromatographicPeakDetection = chromatographicPeakDetection; _spectrumSelection = spectrumSelection; _spectralPeakDetection = spectralPeakDetection; _xicPeakPicker = xicPeakPicker; _isotopicProfileFinder = isotopicProfileFinder; _labelAmountCalculator = labelAmountCalculator; _xicSmoothing = xicSmoothing; _spectrumSmoothing = spectrumSmoothing; _deuterationResultGenerator = deuterationResultGenerator; _serviceLocator = serviceLocator; ProcessingSteps.Add(_xicSelection); ProcessingSteps.Add(_xicSmoothing); ProcessingSteps.Add(_chromatographicPeakDetection); ProcessingSteps.Add(_xicPeakPicker); ProcessingSteps.Add(_spectrumSelection); ProcessingSteps.Add(_spectrumSmoothing); ProcessingSteps.Add(_spectralPeakDetection); ProcessingSteps.Add(_isotopicProfileFinder); ProcessingSteps.Add(_labelAmountCalculator); }