public MsMsFragmentAlgorithm(
IEventAggregator eventAggregator,
IMsMsSpectrumSelection msmsSpectrumSelection,
ISmoothing smoothing,
MsMsFragmentAnalyzer msmsFragmentAnalyzer,
DeuterationResultGenerator deuterationResultGenerator,
IServiceLocator serviceLocator)
{
_eventAggregator = eventAggregator;
this.deuterationResultGenerator = deuterationResultGenerator;
this.msmsSpectrumSelection = msmsSpectrumSelection;
_smoothing = smoothing;
this.msmsFragmentAnalyzer = msmsFragmentAnalyzer;
_serviceLocator = serviceLocator;
ProcessingSteps.Add(msmsSpectrumSelection);
ProcessingSteps.Add(_smoothing);
ProcessingSteps.Add(msmsFragmentAnalyzer);
}
public LabelAmountAlgorithm(
IEventAggregator eventAggregator,
IXicSelection xicSelection,
IChromatographicPeakDetection chromatographicPeakDetection,
XicPeakPicker xicPeakPicker,
ISpectrumSelection spectrumSelection,
ISpectralPeakDetection spectralPeakDetection,
IsotopicProfileFinder isotopicProfileFinder,
LabelAmountCalculator labelAmountCalculator,
ISmoothing xicSmoothing,
ISmoothing spectrumSmoothing,
DeuterationResultGenerator deuterationResultGenerator,
IServiceLocator serviceLocator)
: base()
{
_eventAggregator = eventAggregator;
_xicSelection = xicSelection;
_chromatographicPeakDetection = chromatographicPeakDetection;
_spectrumSelection = spectrumSelection;
_spectralPeakDetection = spectralPeakDetection;
_xicPeakPicker = xicPeakPicker;
_isotopicProfileFinder = isotopicProfileFinder;
_labelAmountCalculator = labelAmountCalculator;
_xicSmoothing = xicSmoothing;
_spectrumSmoothing = spectrumSmoothing;
_deuterationResultGenerator = deuterationResultGenerator;
_serviceLocator = serviceLocator;
ProcessingSteps.Add(_xicSelection);
ProcessingSteps.Add(_xicSmoothing);
ProcessingSteps.Add(_chromatographicPeakDetection);
ProcessingSteps.Add(_xicPeakPicker);
ProcessingSteps.Add(_spectrumSelection);
ProcessingSteps.Add(_spectrumSmoothing);
ProcessingSteps.Add(_spectralPeakDetection);
ProcessingSteps.Add(_isotopicProfileFinder);
ProcessingSteps.Add(_labelAmountCalculator);
}
