public override void GlobalContext()
{
base.GlobalContext();
var simulationFile = HelperForSpecs.DataFile("S1.pkml");
var simulationPersister = Api.GetSimulationPersister();
_simulation = simulationPersister.LoadSimulation(simulationFile);
_sensitivityAnalysis = new SensitivityAnalysis(_simulation)
{
NumberOfSteps = 2, VariationRange = 0.2
};
var containerTask = Api.GetContainerTask();
var liverVolumes = containerTask.AllParametersMatching(_simulation, "Organism|Liver|Volume");
_sensitivityAnalysis.AddParameters(liverVolumes);
_sensitivityAnalysisRunner = Api.GetSensitivityAnalysisRunner();
_sensitivityAnalysisRunResult = _sensitivityAnalysisRunner.Run(_sensitivityAnalysis);
_allPKParameterSensitivities = _sensitivityAnalysisRunResult.AllPKParameterSensitivities;
}
public RunSensitivityAnalysisUICommand(ISensitivityAnalysisRunner sensitivityAnalysisRunner, IActiveSubjectRetriever activeSubjectRetriever) : base(activeSubjectRetriever)
{
_sensitivityAnalysisRunner = sensitivityAnalysisRunner;
}
