public static float GetGlycanAVGMass(Glycan.Type argType) { float Mass = 0.0f; if (argType == Glycan.Type.HexNAc) { Mass = _HexNAcAVG; } else if (argType == Glycan.Type.Hex) { Mass = _HexAVG; } else if (argType == Glycan.Type.DeHex) { Mass = _DeHexAVG; } else if (argType == Glycan.Type.NeuAc) { Mass = _NeuAcAVG; } else { Mass = _NeuGcAVG; } return(Mass); }
public static float GetGlycanMasswithCharge(Glycan.Type argType, int argCharge) { // // m/z = (mass + Proton * charge) / charge // => mass/charge + Proton // return((float)((GetGlycanMass(argType) + MassLib.Atoms.ProtonMass * argCharge) / argCharge)); }
private Image GlycanCartoon(Glycan.Type argType) { Bitmap glycan = new Bitmap(11, 11); Graphics g = Graphics.FromImage(glycan); Brush SolidBrush; Pen Linear = new Pen(Color.Black, 1.0f * _ScaleFactor); Point[] loc; switch (argType) { case Glycan.Type.DeHex: SolidBrush = new SolidBrush(Color.FromArgb(255, 0, 0)); if (_isBW) { SolidBrush = new SolidBrush(Color.White); } loc = new Point[] { new Point(0, 10), new Point(5, 0), new Point(10, 10) }; g.FillPolygon(SolidBrush, loc); g.DrawPolygon(Linear, loc); break; case Glycan.Type.Gal: SolidBrush = new SolidBrush(Color.FromArgb(255, 255, 0)); if (_isBW) { SolidBrush = new SolidBrush(Color.White); } g.FillEllipse(SolidBrush, 0, 0, 10 * _ScaleFactor, 10 * _ScaleFactor); g.DrawEllipse(Linear, 0, 0, 10 * _ScaleFactor, 10 * _ScaleFactor); break; case Glycan.Type.HexNAc: SolidBrush = new SolidBrush(Color.FromArgb(0, 0, 250)); if (_isBW) { SolidBrush = new SolidBrush(Color.White); } g.FillRectangle(SolidBrush, 0, 0, 10 * _ScaleFactor, 10 * _ScaleFactor); g.DrawRectangle(Linear, 0, 0, 10 * _ScaleFactor, 10 * _ScaleFactor); break; case Glycan.Type.Man: SolidBrush = new SolidBrush(Color.FromArgb(0, 200, 50)); if (_isBW) { SolidBrush = new SolidBrush(Color.White); } g.FillEllipse(SolidBrush, 0, 0, 10 * _ScaleFactor, 10 * _ScaleFactor); g.DrawEllipse(Linear, 0, 0, 10 * _ScaleFactor, 10 * _ScaleFactor); break; case Glycan.Type.NeuAc: SolidBrush = new SolidBrush(Color.FromArgb(200, 0, 200)); if (_isBW) { SolidBrush = new SolidBrush(Color.White); } loc = new Point[] { new Point(0, 5), new Point(5, 10), new Point(10, 5), new Point(5, 0) }; g.FillPolygon(SolidBrush, loc); g.DrawPolygon(Linear, loc); break; case Glycan.Type.NeuGc: SolidBrush = new SolidBrush(Color.FromArgb(233, 255, 255)); if (_isBW) { SolidBrush = new SolidBrush(Color.White); } loc = new Point[] { new Point(0, 5), new Point(5, 10), new Point(10, 5), new Point(5, 0) }; g.FillPolygon(SolidBrush, loc); g.DrawPolygon(Linear, loc); break; } return(glycan); }
public GlycanTreeForDrawer(Glycan.Type argType) { _root = argType; _child = new List<GlycanTreeForDrawer>(); }
public GlycanTreeForDrawer(Glycan.Type argType) { _root = argType; _child = new List <GlycanTreeForDrawer>(); }