/// <summary>
/// Creates a dna derived sequence after adding and removing few items from original sequence.
/// Create a copy of derived sequence and validates it against expected sequence.
/// </summary>
/// <param name="nodeName">alphabet xml node.</param>
private void ValidateDerivedSequenceClone(string nodeName)
{
// Get input and expected values from xml
string expectedSequence = _utilityObj._xmlUtil.GetTextValue(
nodeName, Constants.ExpectedSequence);
string alphabetName = _utilityObj._xmlUtil.GetTextValue(
nodeName, Constants.AlphabetNameNode);
string removeRange = _utilityObj._xmlUtil.GetTextValue(
nodeName, Constants.RemoveRange);
string addSequence = _utilityObj._xmlUtil.GetTextValue(
nodeName, Constants.AddSequence);
string derivedSequence = _utilityObj._xmlUtil.GetTextValue(
nodeName, Constants.DerivedSequence);
IAlphabet alphabet = Utility.GetAlphabet(alphabetName);
// Create derived Sequence
DerivedSequence derSequence = CreateDerivedSequence(
alphabet, expectedSequence, addSequence, removeRange);
DerivedSequence derSequenceCopy = derSequence.Clone();
// Validate copy of derived Sequence.
Assert.AreEqual(derSequence.ToString(), derSequenceCopy.ToString());
Assert.AreEqual(derivedSequence, derSequenceCopy.ToString());
Console.WriteLine(
"DerivedSequenceBvtTestCases:Validation of Clone() of derived sequence completed successfully");
ApplicationLog.WriteLine(
"DerivedSequenceBvtTestCases:Validation of Clone() of derived sequence completed successfully");
}
public void DerivedSequenceClone()
{
Sequence seq = new Sequence(Alphabets.RNA, "ACUGA");
DerivedSequence derSeq = new DerivedSequence(seq);
derSeq.RemoveAt(0);
Assert.AreEqual(derSeq.ToString(), "CUGA");
derSeq.RemoveAt(2);
Assert.AreEqual(derSeq.ToString(), "CUA");
derSeq.Insert(2, Alphabets.RNA.C);
Assert.AreEqual(derSeq.ToString(), "CUCA");
DerivedSequence cloneCopy = derSeq.Clone();
Assert.AreNotSame(derSeq, cloneCopy);
Assert.AreNotSame(derSeq.Source, cloneCopy.Source);
Assert.AreEqual(derSeq.ToString(), cloneCopy.ToString());
}
