C# (CSharp) CQS.Genome.SomaticMutation FilterProcessorOptions примеры использования

Пример #1

Файл: ValidationProcessorOptions.cs Проект: shengqh/CQS.Core

    public override FilterProcessorOptions GetFilterOptions()
    {
      var result = new FilterProcessorOptions();
      BeanUtils.CopyPropeties(this, result);

      result.Config = Config;
      result.IsPileup = false;
      result.IsValidation = true;
      result.InputFile = BaseFilename;
      result.OutputFile = GetLinuxFile(OutputSuffix + ".r.tsv");

      return result;
    }

Пример #2

Файл: PipelineProcessorOptions.cs Проект: biosharp-dotnet-labs/CQS.Core

        public override FilterProcessorOptions GetFilterOptions()
        {
            var result = new FilterProcessorOptions();

            BeanUtils.CopyPropeties(this, result);

            result.Config     = Config;
            result.IsPileup   = true;
            result.InputFile  = BaseFilename;
            result.OutputFile = FilterResultFile;

            return(result);
        }

Пример #3

Файл: PipelineProcessorOptions.cs Проект: shengqh/CQS.Core

    public override FilterProcessorOptions GetFilterOptions()
    {
      var result = new FilterProcessorOptions();

      BeanUtils.CopyPropeties(this, result);

      result.Config = Config;
      result.IsPileup = true;
      result.InputFile = BaseFilename;
      result.OutputFile = FilterResultFile;

      return result;
    }

Пример #4

        public override FilterProcessorOptions GetFilterOptions()
        {
            var result = new FilterProcessorOptions();

            BeanUtils.CopyPropeties(this, result);

            result.Config       = Config;
            result.IsPileup     = false;
            result.IsValidation = true;
            result.InputFile    = BaseFilename;
            result.OutputFile   = GetLinuxFile(OutputSuffix + ".r.tsv");

            return(result);
        }

Пример #5

Файл: FilterProcessor.cs Проект: shengqh/CQS.Core

 public FilterProcessor(FilterProcessorOptions options)
 {
   _options = options;
 }

Пример #6

 public FilterItemVcfWriter(FilterProcessorOptions options)
 {
     this.options = options;
 }

Пример #7

 public FilterProcessor(FilterProcessorOptions options)
 {
     _options = options;
 }