public void TestCanReadToysSpec() { var parser = new RuleFileParser(); var res = parser.ParseRules(@"toy.spec", new List <string>() { "S1" }); Assert.AreEqual(res.Conditions.Count, 4); Assert.IsTrue(res.Conditions.ContainsKey("Conditions1")); Assert.IsTrue(res.Conditions.ContainsKey("Conditions2")); Assert.IsTrue(res.Conditions.ContainsKey("Expression1")); Assert.IsTrue(res.Conditions.ContainsKey("Expression2")); Assert.IsTrue(res.Conditions["Conditions1"]["S1"] == false); Assert.IsTrue(res.Conditions["Conditions1"]["S2"] == true); Assert.IsTrue(res.Conditions["Conditions2"]["S1"] == true); Assert.IsTrue(res.Conditions["Conditions2"]["S2"] == true); Assert.IsTrue(res.Conditions["Expression1"]["A"] == true); Assert.IsTrue(res.Conditions["Expression1"]["B"] == true); Assert.IsTrue(res.Conditions["Expression1"]["C"] == true); Assert.IsTrue(res.Conditions["Expression2"]["A"] == false); Assert.IsTrue(res.Conditions["Expression2"]["B"] == true); Assert.IsTrue(res.Conditions["Expression2"]["C"] == true); Assert.IsTrue(res.Experiments.Count == 2); Assert.IsTrue(res.Experiments.ContainsKey("Experiment1")); Assert.IsTrue(res.Experiments.ContainsKey("Experiment2")); Assert.IsTrue(res.Experiments["Experiment1"].Conditions[0]["S1"] == false); Assert.IsTrue(res.Experiments["Experiment1"].Conditions[0]["S2"] == true); Assert.IsTrue(res.Experiments["Experiment1"].Conditions[0]["A"] == true); Assert.IsTrue(res.Experiments["Experiment1"].Conditions[0]["B"] == true); Assert.IsTrue(res.Experiments["Experiment1"].Conditions[0]["C"] == true); Assert.IsTrue(res.Experiments["Experiment1"].Conditions[18]["A"] == false); Assert.IsTrue(res.Experiments["Experiment1"].Conditions[18]["B"] == true); Assert.IsTrue(res.Experiments["Experiment1"].Conditions[18]["C"] == true); Assert.IsTrue(res.Experiments["Experiment1"].Conditions[18].IsFixedPoint); Assert.IsTrue(res.Experiments["Experiment2"].Conditions[0]["S1"] == true); Assert.IsTrue(res.Experiments["Experiment2"].Conditions[0]["S2"] == true); Assert.IsTrue(res.Experiments["Experiment2"].Conditions[0]["A"] == false); Assert.IsTrue(res.Experiments["Experiment2"].Conditions[0]["B"] == true); Assert.IsTrue(res.Experiments["Experiment2"].Conditions[0]["C"] == true); Assert.IsTrue(res.Experiments["Experiment2"].Conditions[18]["A"] == true); Assert.IsTrue(res.Experiments["Experiment2"].Conditions[18]["B"] == true); Assert.IsTrue(res.Experiments["Experiment2"].Conditions[18]["C"] == true); Assert.IsTrue(res.Experiments["Experiment2"].Conditions[18].IsFixedPoint); }
public void TestCanReadPluriPotencySpec() { var parser = new RuleFileParser(); var res = parser.ParseRules(@"C:\dev\Automate\GeneAutomate\GeneAutomate\Examples\pluripotency.spec", new List <string>() { "LIF" }); var condition = res.Conditions; var exp = res.Experiments; Assert.AreEqual(23, exp.Count); Assert.IsTrue(exp.ContainsKey("ExperimentOne")); Assert.IsTrue(exp.ContainsKey("ExperimentTwo")); Assert.IsTrue(exp.ContainsKey("ExperimentThree")); Assert.IsTrue(exp.ContainsKey("ExperimentFour")); Assert.IsTrue(exp.ContainsKey("ExperimentFive")); Assert.IsTrue(exp.ContainsKey("ExperimentSix")); Assert.IsTrue(exp.ContainsKey("ExperimentSeven")); Assert.IsTrue(exp.ContainsKey("ExperimentEight")); Assert.IsTrue(exp.ContainsKey("ExperimentNine")); Assert.IsTrue(exp.ContainsKey("ExperimentTen")); Assert.IsTrue(exp.ContainsKey("ExperimentEleven")); Assert.IsTrue(exp.ContainsKey("ExperimentTwelve")); Assert.IsTrue(exp.ContainsKey("ExperimentThirteen")); Assert.IsTrue(exp.ContainsKey("ExperimentFourteen")); Assert.IsTrue(exp.ContainsKey("ExperimentFifteen")); Assert.IsTrue(exp.ContainsKey("ExperimentSixteen")); Assert.IsTrue(exp.ContainsKey("ExperimentSeventeen")); Assert.IsTrue(exp.ContainsKey("ExperimentEighteen")); Assert.IsTrue(exp.ContainsKey("ExperimentNineteen")); Assert.IsTrue(exp.ContainsKey("ExperimentTwenty")); Assert.IsTrue(exp.ContainsKey("ExperimentTwentyOne")); Assert.IsTrue(exp.ContainsKey("ExperimentTwentyTwo")); Assert.IsTrue(exp.ContainsKey("ExperimentTwentyThree")); Assert.AreEqual(33, condition.Count); Assert.IsTrue(condition["2iPlusLifTfcp2l1Overexpression"]["MEKERK"] == false); Assert.IsTrue(condition["2iPlusLifTfcp2l1Overexpression"]["Oct4"] == true); Assert.IsTrue(condition["2iPlusLifTfcp2l1Overexpression"]["Sox2"] == true); Assert.IsTrue(condition["2iPlusLifTfcp2l1Overexpression"]["Nanog"] == true); Assert.IsTrue(condition["2iPlusLifTfcp2l1Overexpression"]["Esrrb"] == true); Assert.IsTrue(condition["2iPlusLifTfcp2l1Overexpression"]["Klf2"] == true); Assert.IsTrue(condition["2iPlusLifTfcp2l1Overexpression"]["Tfcp2l1"] == true); Assert.IsTrue(condition["2iPlusLifTfcp2l1Overexpression"]["Klf4"] == true); Assert.IsTrue(condition["2iPlusLifTfcp2l1Overexpression"]["Gbx2"] == true); Assert.IsTrue(condition["2iPlusLifTfcp2l1Overexpression"]["Tbx3"] == true); Assert.IsTrue(condition["2iPlusLifTfcp2l1Overexpression"]["Tcf3"] == false); Assert.IsTrue(condition["2iPlusLifTfcp2l1Overexpression"]["Sall4"] == true); Assert.IsTrue(condition["2iPlusLifTfcp2l1Overexpression"]["Stat3"] == true); }