/// <summary>
/// Create an object using the contents of the corresponding MzIdentML object
/// </summary>
/// <param name="apc"></param>
/// <param name="idata"></param>
public AnalysisProtocolCollectionObj(AnalysisProtocolCollectionType apc, IdentDataObj idata)
: base(idata)
{
SpectrumIdentificationProtocols = new IdentDataList <SpectrumIdentificationProtocolObj>(1);
_proteinDetectionProtocol = null;
idata.AnalysisProtocolCollection = this;
if (apc.SpectrumIdentificationProtocol?.Count > 0)
{
SpectrumIdentificationProtocols.AddRange(apc.SpectrumIdentificationProtocol, sip => new SpectrumIdentificationProtocolObj(sip, IdentData));
}
if (apc.ProteinDetectionProtocol != null)
{
_proteinDetectionProtocol = new ProteinDetectionProtocolObj(apc.ProteinDetectionProtocol, IdentData);
}
}
/// <summary>
/// Create an object using the contents of the corresponding MzIdentML object
/// </summary>
/// <param name="apc"></param>
/// <param name="idata"></param>
public AnalysisProtocolCollectionObj(AnalysisProtocolCollectionType apc, IdentDataObj idata)
: base(idata)
{
_spectrumIdentificationProtocols = null;
_proteinDetectionProtocol = null;
idata.AnalysisProtocolCollection = this;
if (apc.SpectrumIdentificationProtocol != null && apc.SpectrumIdentificationProtocol.Count > 0)
{
SpectrumIdentificationProtocols = new IdentDataList <SpectrumIdentificationProtocolObj>();
foreach (var sip in apc.SpectrumIdentificationProtocol)
{
SpectrumIdentificationProtocols.Add(new SpectrumIdentificationProtocolObj(sip, IdentData));
}
}
if (apc.ProteinDetectionProtocol != null)
{
_proteinDetectionProtocol = new ProteinDetectionProtocolObj(apc.ProteinDetectionProtocol, IdentData);
}
}
