public Hl7.Fhir.Model.Bundle everythingById(string id)
{
Hl7.Fhir.Model.Bundle ReturnedBundle = null;
try
{
//Attempt to send the resource to the server endpoint
UriBuilder UriBuilderx = new UriBuilder(FhirClientEndPoint);
UriBuilderx.Path = "Patient/" + id;
Hl7.Fhir.Model.Resource ReturnedResource = _client.InstanceOperation(UriBuilderx.Uri, "everything");
if (ReturnedResource is Hl7.Fhir.Model.Bundle)
{
ReturnedBundle = ReturnedResource as Hl7.Fhir.Model.Bundle;
Console.WriteLine("Received: " + ReturnedBundle.Total + " results. ");
}
else
{
throw new Exception("Operation call must return a bundle resource");
}
Console.WriteLine();
}
catch (Hl7.Fhir.Rest.FhirOperationException FhirOpExec)
{
//Process any Fhir Errors returned as OperationOutcome resource
Console.WriteLine();
Console.WriteLine("An error message: " + FhirOpExec.Message);
Console.WriteLine();
string xml = Hl7.Fhir.Serialization.FhirSerializer.SerializeResourceToXml(FhirOpExec.Outcome);
XDocument xDoc = XDocument.Parse(xml);
Console.WriteLine(xDoc.ToString());
}
return(ReturnedBundle);
}
public ActionResult ShowResourceVersion(string rId, string id)
{
var conn = new FhirClient("http://localhost:8080/baseR4");
conn.PreferredFormat = ResourceFormat.Json;
Patient patient = conn.Read <Patient>("Patient/" + id);
UriBuilder uriBuilder = new UriBuilder("http://localhost:8080/baseR4");
uriBuilder.Path = "Patient/" + patient.Id;
Resource resultResource = conn.InstanceOperation(uriBuilder.Uri, "everything");
var resourceList = new List <Details>();
if (resultResource is Bundle)
{
Bundle resultBundle = resultResource as Bundle;
while (resultBundle != null)
{
foreach (var i in resultBundle.Entry)
{
Details element = new Details();
switch (i.Resource.TypeName)
{
case "Observation":
Observation observation = (Observation)i.Resource;
if (observation.Id == rId)
{
element.id = observation.Id;
element.resourceName = "Observation";
element.reason = observation.Code.Text;
element.version = observation.Meta.VersionId;
int versions = int.Parse(element.version);
for (int j = 1; j <= versions; j++)
{
Details vPatient = new Details();
UriBuilder uriBuilder1 = new UriBuilder("http://localhost:8080/baseR4");
uriBuilder1.Path = "Observation/" + element.id + "/_history/" + j;
Observation resultResource1 = conn.Read <Observation>(uriBuilder1.Uri);
vPatient.id = resultResource1.Id;
vPatient.reason = resultResource1.Code.Text;
vPatient.date = Convert.ToDateTime(resultResource1.Effective.ToString());
vPatient.version = resultResource1.Meta.VersionId;
vPatient.modDate = Convert.ToDateTime(resultResource1.Meta.LastUpdated.ToString());
resourceList.Add(vPatient);
}
}
break;
}
}
resultBundle = conn.Continue(resultBundle, PageDirection.Next);
}
}
return(View(resourceList));
}
[TestMethod, Ignore] //Server throws error: Access violation at address 000000000129D56C in module 'FHIRServer.exe'. Read of address 0000000000000000
public void InvokeTestPatientGetEverything()
{
var client = new FhirClient(testEndpoint);
var start = new FhirDateTime(2014,11,1);
var end = new FhirDateTime(2015,1,1);
var par = new Parameters().Add("start", start).Add("end", end);
var bundle = (Bundle)client.InstanceOperation(ResourceIdentity.Build("Patient", "1"), "everything", par);
Assert.IsTrue(bundle.Entry.Any());
var bundle2 = client.FetchPatientRecord(ResourceIdentity.Build("Patient","1"), start, end);
Assert.IsTrue(bundle2.Entry.Any());
}
public void InvokeExpandUsingInstanceOp()
{
var client = new FhirClient(testEndpoint);
// var vs = client.Read<ValueSet>("ValueSet/administrative-gender");
// var vsX = client.ExpandValueSet(ExpandValueSet(vs);
// Assert.IsTrue(vsX.Expansion.Contains.Any());
var result = client.InstanceOperation(ResourceIdentity.Build("ValueSet", "extensional-case-1"),
FhirClientOperations.Operation.EXPAND_VALUESET);
}
public void InvokeTestPatientGetEverything()
{
var client = new FhirClient(testEndpoint);
var start = new FhirDateTime(2014, 11, 1);
var end = new FhirDateTime(2015, 1, 1);
var par = new Parameters().Add("start", start).Add("end", end);
var bundle = (Bundle)client.InstanceOperation(ResourceIdentity.Build("Patient", "example"), "everything", par);
Assert.IsTrue(bundle.Entry.Any());
var bundle2 = client.FetchPatientRecord(ResourceIdentity.Build("Patient", "example"), start, end);
Assert.IsTrue(bundle2.Entry.Any());
}
private static void CreatePatientFile(FhirClient client, string patientid)
{
string SericeRootURI = "https://r3.smarthealthit.org/";
UriBuilder UriBuildX = new UriBuilder(SericeRootURI);
Bundle bundle = null;
UriBuildX.Path = "Patient/" + patientid;
var Returnedresource = client.InstanceOperation(UriBuildX.Uri, "everything");
if (Returnedresource is Bundle)
{
bundle = Returnedresource as Bundle;
}
//var query = new string[] { "name=Rob" };
//var bundle = client.Search("Patient", query);
}
public static void GetEverythingForPatient(string patientId)
{
UriBuilder uriBuilder = new UriBuilder(FhirClientEndPoint);
uriBuilder.Path = "Patient/" + patientId;
try
{
FhirClient fhirClient = new FhirClient(FhirClientEndPoint);
Resource resultResource = fhirClient.InstanceOperation(uriBuilder.Uri, "everything");
var xml = FhirSerializer.SerializeResourceToXml(resultResource);
LogToFile(XDocument.Parse(xml).ToString());
}
catch (Exception ex)
{
LogToFile(ex.ToString());
}
}
public void CreateAndFullRepresentation()
{
FhirClient client = new FhirClient(testEndpoint);
client.ReturnFullResource = true; // which is also the default
var pat = client.Read <Patient>("Patient/example");
ResourceIdentity ri = pat.ResourceIdentity().WithBase(client.Endpoint);
pat.Id = null;
pat.Identifier.Clear();
var patC = client.Create <Patient>(pat);
Assert.IsNotNull(patC);
client.ReturnFullResource = false;
patC = client.Create <Patient>(pat);
Assert.IsNull(patC);
if (client.LastBody != null)
{
var returned = client.LastBodyAsResource;
Assert.IsTrue(returned is OperationOutcome);
}
// Now validate this resource
client.ReturnFullResource = true; // which is also the default
Parameters p = new Parameters();
// p.Add("mode", new FhirString("create"));
p.Add("resource", pat);
OperationOutcome ooI = (OperationOutcome)client.InstanceOperation(ri.WithoutVersion(), "validate", p);
Assert.IsNotNull(ooI);
}
public ViewResult ShowInfo(string id, DateTime?after, DateTime?before, int?page)
{
//POKAZYWANIE WSZYSTKICH INFORMACJI O PACJENCIE
//ŁĄCZENIE Z SERWEREM
var client = new FhirClient("http://localhost:8080/baseR4"); //second parameter - check standard version
client.PreferredFormat = ResourceFormat.Json;
Patient myPatient = client.Read <Patient>("Patient/" + id);
UriBuilder UriBuilderx = new UriBuilder("http://localhost:8080/baseR4");
UriBuilderx.Path = "Patient/" + myPatient.Id;
Resource ReturnedResource = client.InstanceOperation(UriBuilderx.Uri, "everything");
//DANE OSOBOWE PACJENTA
ViewBag.Surname = myPatient.Name[0].Family;
ViewBag.ID = myPatient.Id;
ViewBag.Name = myPatient.Name[0].Given.FirstOrDefault();
ViewBag.birthDate = new Date(myPatient.BirthDate.ToString());
//WYSZUKIWANIE "EVERYTHING"
var myElemList = new List <ShowInfo>();
if (ReturnedResource is Bundle)
{
Bundle ReturnedBundle = ReturnedResource as Bundle;
while (ReturnedBundle != null)
{
foreach (var Entry in ReturnedBundle.Entry)
{
ShowInfo myElem = new ShowInfo();
//DANE DO OSI CZASU
if (Entry.Resource.TypeName == "Observation")
{
//LISTA OBSERVATION
Observation observation = (Observation)Entry.Resource;
myElem.elemID = observation.Id;
myElem.originalModel = "Observation";
var amount = observation.Value as Quantity;
if (amount != null)
{
myElem.amount = amount.Value + " " + amount.Unit;
}
myElem.date = Convert.ToDateTime(observation.Effective.ToString());
myElem.reason = observation.Code.Text;
myElemList.Add(myElem);
}
else if (Entry.Resource.TypeName == "MedicationRequest")
{
//LISTA MEDICATIONSTATEMENT
MedicationRequest mrequest = (MedicationRequest)Entry.Resource;
myElem.elemID = mrequest.Id;
myElem.originalModel = "MedicationRequest";
myElem.date = Convert.ToDateTime(mrequest.AuthoredOn.ToString());
myElem.reason += (mrequest.Medication as CodeableConcept).Text;
myElemList.Add(myElem);
}
}
ReturnedBundle = client.Continue(ReturnedBundle, PageDirection.Next);
}
}
else
{
throw new Exception("Operation call must return a bundle resource");
}
//OKREŚLENIE SZUKANEJ DATY
if (before != null)
{
DateTime date = before.GetValueOrDefault();
myElemList = myElemList.FindAll(s => s.date.Date.CompareTo(date.Date) < 0);
ViewBag.Before = date;
}
if (after != null)
{
DateTime date = after.GetValueOrDefault();
myElemList = myElemList.FindAll(s => s.date.Date.CompareTo(date.Date) > 0);
ViewBag.After = date;
}
myElemList.Reverse(); //żeby daty były odpowiednio od najwyższej
int pageSize = 10;
int pageNumber = (page ?? 1);
return(View(myElemList.ToPagedList(pageNumber, pageSize)));
}
public ActionResult Chart(string id, DateTime?after, DateTime?before)
{
var client = new FhirClient("http://localhost:8080/baseR4");
client.PreferredFormat = ResourceFormat.Json;
Patient myPatient = client.Read <Patient>("Patient/" + id); //5cbc121b-cd71-4428-b8b7-31e53eba8184
UriBuilder UriBuilderx = new UriBuilder("http://localhost:8080/baseR4");
UriBuilderx.Path = "Patient/" + myPatient.Id;
Resource ReturnedResource = client.InstanceOperation(UriBuilderx.Uri, "everything");
//DANE OSOBOWE PACJENTA
ViewBag.Surname = myPatient.Name[0].Family;
ViewBag.Name = myPatient.Name[0].Given.FirstOrDefault();
ViewBag.ID = id;
//WYSZUKIWANIE "EVERYTHING"
var list = new List <ChartModel> {
};
if (ReturnedResource is Bundle)
{
Bundle ReturnedBundle = ReturnedResource as Bundle;
while (ReturnedBundle != null)
{
foreach (var Entry in ReturnedBundle.Entry)
{
//DANE DO OSI CZASU
if (Entry.Resource.TypeName == "Observation")
{
//LISTA BADAŃ WAGI
Observation observation = (Observation)Entry.Resource;
if (observation.Code.Text.Contains("Body Weight"))
{
var val = observation.Value as Quantity;
var amount = double.Parse((val.Value).ToString());
var date = observation.Effective.ToString().Substring(0, 10);
var point = new ChartModel(amount, date);
list.Add(point);
}
}
}
ReturnedBundle = client.Continue(ReturnedBundle, PageDirection.Next);
}
}
else
{
throw new Exception("Operation call must return a bundle resource");
}
//OKREŚLENIE SZUKANEJ DATY
if (before != null)
{
DateTime date = before.GetValueOrDefault();
list = list.FindAll(s => Convert.ToDateTime(s.label).Date.CompareTo(date.Date) < 0);
ViewBag.Before = date;
}
if (after != null)
{
DateTime date = after.GetValueOrDefault();
list = list.FindAll(s => Convert.ToDateTime(s.label).Date.CompareTo(date.Date) > 0);
ViewBag.After = date;
}
ViewBag.DataPoints = JsonConvert.SerializeObject(list);
return(View());
}
public void CreateAndFullRepresentation()
{
FhirClient client = new FhirClient(testEndpoint);
client.ReturnFullResource = true; // which is also the default
var pat = client.Read<Patient>("Patient/example");
ResourceIdentity ri = pat.ResourceIdentity().WithBase(client.Endpoint);
pat.Id = null;
pat.Identifier.Clear();
var patC = client.Create<Patient>(pat);
Assert.IsNotNull(patC);
client.ReturnFullResource = false;
patC = client.Create<Patient>(pat);
Assert.IsNull(patC);
if (client.LastBody != null)
{
var returned = client.LastBodyAsResource;
Assert.IsTrue(returned is OperationOutcome);
}
// Now validate this resource
client.ReturnFullResource = true; // which is also the default
Parameters p = new Parameters();
// p.Add("mode", new FhirString("create"));
p.Add("resource", pat);
OperationOutcome ooI = (OperationOutcome)client.InstanceOperation(ri.WithoutVersion(), "validate", p);
Assert.IsNotNull(ooI);
}
public ViewResult ShowDetails(string id)
{
var conn = new FhirClient("http://localhost:8080/baseR4");
conn.PreferredFormat = ResourceFormat.Json;
Patient patient = conn.Read <Patient>("Patient/" + id);
UriBuilder uriBuilder = new UriBuilder("http://localhost:8080/baseR4");
uriBuilder.Path = "Patient/" + patient.Id;
Resource resultResource = conn.InstanceOperation(uriBuilder.Uri, "everything");
ViewBag.Surname = patient.Name[0].Family;
ViewBag.ID = patient.Id;
ViewBag.Name = patient.Name[0].Given.FirstOrDefault();
ViewBag.birthDate = new Date(patient.BirthDate.ToString());
var listElement = new List <Details>();
if (resultResource is Bundle)
{
Bundle resultBundle = resultResource as Bundle;
while (resultBundle != null)
{
foreach (var i in resultBundle.Entry)
{
Details element = new Details();
switch (i.Resource.TypeName)
{
case "Observation":
Observation observation = (Observation)i.Resource;
element.id = observation.Id;
element.resourceName = "Observation";
element.date = Convert.ToDateTime(observation.Effective.ToString());
element.reason = observation.Code.Text;
element.version = observation.Meta.VersionId;
Quantity amount = observation.Value as Quantity;
if (amount != null)
{
element.amount = amount.Value + " " + amount.Unit;
}
listElement.Add(element);
break;
case "MedicationRequest":
MedicationRequest medicationRequest = (MedicationRequest)i.Resource;
element.id = medicationRequest.Id;
element.resourceName = "MedicationRequest";
element.date = Convert.ToDateTime(medicationRequest.AuthoredOn.ToString());
element.reason += ((CodeableConcept)medicationRequest.Medication).Text;
element.version = medicationRequest.Meta.VersionId;
listElement.Add(element);
break;
}
}
resultBundle = conn.Continue(resultBundle, PageDirection.Next);
}
}
listElement = listElement.OrderByDescending(s => s.date).ToList();
return(View(listElement.ToList()));
}
public ActionResult Save(DetailsPatient item)
{
DetailsPatient element = new DetailsPatient();
element.date = item.date;
element.reason = item.reason;
element.amount = item.amount;
element.resourceName = item.resourceName;
element.id = item.id;
element.patientId = item.patientId;
var conn = new FhirClient("http://localhost:8080/baseR4");
conn.PreferredFormat = ResourceFormat.Json;
Patient patient = conn.Read <Patient>("Patient/" + element.patientId);
UriBuilder uriBuilder = new UriBuilder("http://localhost:8080/baseR4");
uriBuilder.Path = "Patient/" + patient.Id;
Resource resultResource = conn.InstanceOperation(uriBuilder.Uri, "everything");
ViewBag.Surname = patient.Name[0].Family;
ViewBag.ID = patient.Id;
ViewBag.Name = patient.Name[0].Given.FirstOrDefault();
ViewBag.birthDate = new Date(patient.BirthDate.ToString());
if (resultResource is Bundle)
{
Bundle resultBundle = resultResource as Bundle;
while (resultBundle != null)
{
foreach (var i in resultBundle.Entry)
{
DetailsPatient fetchedElement = new DetailsPatient();
switch (i.Resource.TypeName)
{
case "Observation":
Observation observation = (Observation)i.Resource;
if (observation.Id == item.id)
{
fetchedElement.date = observation.Effective;
fetchedElement.reason = observation.Code.Text;
fetchedElement.amount = observation.Meta.VersionId;
UriBuilder uriBuilderBack = new UriBuilder("http://localhost:8080/baseR4");
uriBuilderBack.Path = "Observation/" + item.id;
Observation resultResourceBack = conn.Read <Observation>(uriBuilderBack.Uri);
resultResourceBack.Code.Text = item.reason;
conn.Update(resultResourceBack);
}
break;
case "MedicationRequest":
MedicationRequest medicationRequest = (MedicationRequest)i.Resource;
if (medicationRequest.Id == item.id)
{
fetchedElement.amount = medicationRequest.Meta.VersionId;
//fetchedElement.date = medicationRequest.AuthoredOn
//fetchedElement.reason += ((CodeableConcept)medicationRequest.Medication).Text;
}
break;
}
}
resultBundle = conn.Continue(resultBundle, PageDirection.Next);
}
}
return(View(element));
}
public ViewResult Edit(string id, string resourceName, string patientId)
{
var conn = new FhirClient("http://localhost:8080/baseR4");
conn.PreferredFormat = ResourceFormat.Json;
Patient patient = conn.Read <Patient>("Patient/" + patientId);
UriBuilder uriBuilder = new UriBuilder("http://localhost:8080/baseR4");
uriBuilder.Path = "Patient/" + patient.Id;
Resource resultResource = conn.InstanceOperation(uriBuilder.Uri, "everything");
ViewBag.Surname = patient.Name[0].Family;
ViewBag.ID = patient.Id;
ViewBag.Name = patient.Name[0].Given.FirstOrDefault();
ViewBag.birthDate = new Date(patient.BirthDate.ToString());
var selectedElement = new DetailsPatient();
if (resultResource is Bundle)
{
Bundle resultBundle = resultResource as Bundle;
while (resultBundle != null)
{
foreach (var i in resultBundle.Entry)
{
DetailsPatient element = new DetailsPatient();
switch (i.Resource.TypeName)
{
case "Observation":
Observation observation = (Observation)i.Resource;
if (observation.Id == id)
{
element.id = observation.Id;
element.resourceName = "Observation";
element.date = observation.Effective;
element.reason = observation.Code.Text;
element.amount = observation.Meta.VersionId;
element.patientId = patient.Id;
selectedElement = element;
}
break;
case "MedicationRequest":
MedicationRequest medicationRequest = (MedicationRequest)i.Resource;
if (medicationRequest.Id == id)
{
element.id = medicationRequest.Id;
element.resourceName = "MedicationRequest";
element.reason += ((CodeableConcept)medicationRequest.Medication).Text;
element.patientId = patientId;
element.amount = medicationRequest.Meta.VersionId;
selectedElement = element;
}
break;
}
}
resultBundle = conn.Continue(resultBundle, PageDirection.Next);
}
}
return(View(selectedElement));
}
public ViewResult Chart(string id, string dateType = "all")
{
List <DataPoint> dataPoints = new List <DataPoint>();
var conn = new FhirClient("http://localhost:8080/baseR4");
conn.PreferredFormat = ResourceFormat.Json;
Patient patient = conn.Read <Patient>("Patient/" + id);
var x = conn.History("Patient/" + id);
UriBuilder uriBuilder = new UriBuilder("http://localhost:8080/baseR4");
uriBuilder.Path = "Patient/" + patient.Id;
Resource resultResource = conn.InstanceOperation(uriBuilder.Uri, "everything");
ViewBag.ID = patient.Id;
ViewBag.Name = patient.Name[0].Given.FirstOrDefault() + " " + patient.Name[0].Family;
if (resultResource is Bundle)
{
Bundle resultBundle = resultResource as Bundle;
while (resultBundle != null)
{
foreach (var i in resultBundle.Entry)
{
switch (i.Resource.TypeName)
{
case "Observation":
Observation observation = (Observation)i.Resource;
if (observation.Code.Text.Contains("Glucose"))
{
var date = observation.Effective.ToString().Substring(0, 10);
Quantity value = observation.Value as Quantity;
var amount = double.Parse((value.Value).ToString());
dataPoints.Add(new DataPoint(date, amount));
}
break;
}
}
resultBundle = conn.Continue(resultBundle, PageDirection.Next);
}
}
ViewBag.MessagePost = dateType;
switch (dateType)
{
case "5years":
dataPoints = dataPoints.Where(s => Convert.ToDateTime(s.label) >= DateTime.Now.Date.AddYears(-5)).ToList();
break;
case "1year":
dataPoints = dataPoints.Where(s => Convert.ToDateTime(s.label) >= DateTime.Now.Date.AddYears(-1)).ToList();
break;
case "6months":
dataPoints = dataPoints.Where(s => Convert.ToDateTime(s.label) >= DateTime.Now.Date.AddMonths(-6)).ToList();
break;
case "3month":
dataPoints = dataPoints.Where(s => Convert.ToDateTime(s.label) >= DateTime.Now.Date.AddMonths(-3)).ToList();
break;
case "1month":
dataPoints = dataPoints.Where(s => Convert.ToDateTime(s.label) >= DateTime.Now.Date.AddMonths(-1)).ToList();
break;
default:
break;
}
ViewBag.DataPoints = JsonConvert.SerializeObject(dataPoints);
return(View());
}
