/// <summary>
/// Load the Information Model by reading all the .DCM and .RAW files
/// present in the given directory. The data read is normalised into the
/// Information Model.
/// </summary>
/// <param name="dataDirectory">Source data directory containing the .DCm and .RAW files.</param>
public override void LoadInformationModel(System.String dataDirectory)
{
DataDirectory = dataDirectory;
DirectoryInfo directoryInfo = new DirectoryInfo(DataDirectory);
foreach (FileInfo fileInfo in directoryInfo.GetFiles())
{
if ((fileInfo.Extension.ToLower().Equals(".dcm")) ||
(fileInfo.Extension.ToLower().Equals(".raw")) ||
(fileInfo.Extension == "") || (fileInfo.Extension == null))
{
try
{
// read the DCM file
Dvtk.Sessions.ScriptSession dvtkScriptSession = new Dvtk.Sessions.ScriptSession();
String tempPath = Path.GetTempPath();
dvtkScriptSession.StorageMode = Dvtk.Sessions.StorageMode.AsMedia;
dvtkScriptSession.DataDirectory = tempPath;
dvtkScriptSession.ResultsRootDirectory = tempPath;
DvtkData.Media.DicomFile dvtkDataDicomFile = dvtkScriptSession.ReadFile(fileInfo.FullName);
// Add DICOM file to Information Model - but do not re-save in file
AddToInformationModel(dvtkDataDicomFile, false);
}
catch (Exception)
{
//Invalid DICOM File - will be skiped from QR information model.
}
}
}
}
/// <summary>
/// Writes a Dicom file.
/// </summary>
/// <remarks>
/// The group length attribute (0002,0000) will be set with the correct value
/// automatically before writing to file begins.
/// </remarks>
/// <exception cref="HliException">
/// Writing to the file fails.
/// </exception>
/// <param name="fullFileName">The full file name.</param>
/// <example>
/// <b>VB .NET</b>
/// <code>
/// ' Example: Read a specified DICOM file and
/// 'write it to back to a DICOM file
///
/// Dim myDicomFile As DvtkHighLevelInterface.Dicom.Files.DicomFile
///
/// If File.Exists("c:\somefile.dcm") Then
/// Try
/// myDicomFile.Read("c:\Somefile.dcm")
/// Catch ex As DvtkHighLevelInterface.Common.Other.HliException
/// ' Error reading the file, Maybe the file format is wrong?
/// End Try
/// 'here is where you can manipulate the file
/// 'write the dataset to a file
/// myDicomFile.Write("c:\newfile.dcm")
/// End If
/// </code>
/// </example>
public void Write(String fullFileName)
{
if (FileMetaInformation.TransferSyntax == "")
{
FileMetaInformation.TransferSyntax = "1.2.840.10008.1.2.1";
}
Dvtk.Sessions.ScriptSession dvtkScriptSession = CreateEmptyDvtkScriptSession();
if (this.AddGroupLength)
{
dvtkScriptSession.AddGroupLength = true;
}
DvtkData.Media.DicomFile dvtkDataDicomFile = new DvtkData.Media.DicomFile();
dvtkDataDicomFile.DataSet = this.dataSet.DvtkDataDataSet;
dvtkDataDicomFile.FileMetaInformation = this.fileMetaInformation.DvtkDataFileMetaInformation;
dvtkDataDicomFile.FileHead = this.fileMetaInformation.DvtkDataFileHead;
if (!dvtkScriptSession.WriteFile(dvtkDataDicomFile, fullFileName))
{
throw new HliException("Error while writing file \"" + fullFileName + "\".");
}
}
public void Read(String fullFileName, params String[] definitionFilesFullName)
{
DvtkData.Media.DicomFile dvtkDataDicomFile = null;
if (!File.Exists(fullFileName))
{
throw new HliException("Dicom file or raw file \"" + fullFileName + "\" not found.");
}
String tempPath = Path.GetTempPath();
Dvtk.Sessions.ScriptSession dvtkScriptSession = new Dvtk.Sessions.ScriptSession();
dvtkScriptSession.StorageMode = Dvtk.Sessions.StorageMode.AsMedia;
dvtkScriptSession.DataDirectory = tempPath;
dvtkScriptSession.ResultsRootDirectory = tempPath;
foreach (String definitionFileFullName in definitionFilesFullName)
{
dvtkScriptSession.DefinitionManagement.LoadDefinitionFile(definitionFileFullName);
}
dvtkDataDicomFile = dvtkScriptSession.ReadFile(fullFileName);
this.dataSet.DvtkDataDataSet = dvtkDataDicomFile.DataSet;
this.FileMetaInformation.DvtkDataFileMetaInformation = dvtkDataDicomFile.FileMetaInformation;
this.dvtkDataFileHead = dvtkDataDicomFile.FileHead;
}
public bool Write(String fullFileName)
{
Dvtk.Sessions.ScriptSession dvtkScriptSession = new Dvtk.Sessions.ScriptSession();
DvtkData.Media.DicomFile dvtkDataDicomFile = new DvtkData.Media.DicomFile();
dvtkDataDicomFile.DataSet = this.dataSet.DvtkDataDataSet;
dvtkDataDicomFile.FileMetaInformation = this.fileMetaInformation.DvtkDataFileMetaInformation;
dvtkDataDicomFile.FileHead = this.dvtkDataFileHead;
return(dvtkScriptSession.WriteFile(dvtkDataDicomFile, fullFileName));
}
public void Read(String fullFileName, DicomThread dicomThread)
{
DvtkData.Media.DicomFile dvtkDataDicomFile = null;
if (!File.Exists(fullFileName))
{
throw new HliException("Dicom file or raw file \"" + fullFileName + "\" not found.");
}
dvtkDataDicomFile = dicomThread.DvtkScriptSession.ReadFile(fullFileName);
this.dataSet.DvtkDataDataSet = dvtkDataDicomFile.DataSet;
this.fileMetaInformation.DvtkDataFileMetaInformation = dvtkDataDicomFile.FileMetaInformation;
this.dvtkDataFileHead = dvtkDataDicomFile.FileHead;
}
/// <summary>
/// Reads a file.
/// </summary>
/// <remarks>
/// A new FileMetaInformation and DataSet object will be created inside this object. They will be
/// filled with the content of the specified file.
/// The FileMetaInformation and DataSet object previously used will not change (they will not be
/// used anymore by this object) and can still be used outside this object if needed.
///
/// Also see properties UnVrDefinitionLookUpWhenReading and StoreOBOFOWValuesWhenReading.
///
/// If something goes wrong while reading the file, an exception is thrown.
/// </remarks>
/// <param name="fullFileName">The full file name.</param>
/// <param name="dvtkScriptSession">The dvtk ScriptSession, from which the definition files to use for determining the attribute names are used.</param>
private void Read(String fullFileName, Dvtk.Sessions.ScriptSession dvtkScriptSession)
{
// Create new FileMetaInformation and DataSet (depending on setting) objects.
if (this.createNewDataSetObjectWhenReading)
{
this.dataSet = new DataSet();
}
// Throw an excpetion if the file doesn't exist.
if (!File.Exists(fullFileName))
{
throw new HliException("File \"" + fullFileName + "\" not found.");
}
// Read the DicomFile using the supplied DicomThread.
bool originalUnVrDefinitionLookUp = dvtkScriptSession.UnVrDefinitionLookUp;
Dvtk.Sessions.StorageMode originalDvtkStorageMode = dvtkScriptSession.StorageMode;
dvtkScriptSession.UnVrDefinitionLookUp = this.unVrDefinitionLookUpWhenReading;
if (this.storeOBOFOWValuesWhenReading)
{
dvtkScriptSession.StorageMode = Dvtk.Sessions.StorageMode.AsDataSet;
}
else
{
dvtkScriptSession.StorageMode = Dvtk.Sessions.StorageMode.NoStorage;
}
DvtkData.Media.DicomFile dvtkDataDicomFile = dvtkScriptSession.ReadFile(fullFileName);
if (dvtkDataDicomFile == null)
{
throw new HliException("Error while reading file \"" + fullFileName + "\".");
}
else
{
this.dataSet.DvtkDataDataSet = dvtkDataDicomFile.DataSet;
this.FileMetaInformation = new FileMetaInformation(dvtkDataDicomFile.FileMetaInformation, dvtkDataDicomFile.FileHead);
}
dvtkScriptSession.UnVrDefinitionLookUp = originalUnVrDefinitionLookUp;
dvtkScriptSession.StorageMode = originalDvtkStorageMode;
}
/// <summary>
/// Store the DICOM file into a DICOM Media File in the current Information Model directory.
/// The file contents might be later used for retrieval.The transfer syntax is also passed so that the TS specified
/// in the dcm file is used while moving the file to a Storage SCP
/// </summary>
/// <param name="dicomFile">The DICOM file to store</param>
protected void StoreDicomFile(DvtkData.Media.DicomFile dicomFile)
{
System.String iom = System.String.Empty;
if (Name.Equals("PatientRootInformationModel"))
{
iom = "PR";
}
else if (Name.Equals("StudyRootInformationModel"))
{
iom = "SR";
}
else if (Name.Equals("PatientStudyOnlyInformationModel"))
{
iom = "PS";
}
// generate a filename
System.String filename;
filename = System.String.Format("{0}\\DVTK_IOM_TMP_{1}_{2:00000000}.DCM", DataDirectory, iom, _fileIndex++);
DvtkData.Media.DicomFile dicomMediaFile = new DvtkData.Media.DicomFile();
// set up the file head
DvtkData.Media.FileHead FileHead = new DvtkData.Media.FileHead();
// add the Transfer Syntax UID
//DvtkData.Dul.TransferSyntax transferSyntax = new DvtkData.Dul.TransferSyntax(DvtkData.Dul.TransferSyntax.Explicit_VR_Little_Endian.UID);
FileHead.TransferSyntax = dicomFile.FileHead.TransferSyntax;
// set up the file meta information
DvtkData.Media.FileMetaInformation fileMetaInformation = new DvtkData.Media.FileMetaInformation();
// add the FMI version
fileMetaInformation.AddAttribute(Tag.FILE_META_INFORMATION_VERSION.GroupNumber,
Tag.FILE_META_INFORMATION_VERSION.ElementNumber, VR.OB, 1, 2);
// add the SOP Class UID
System.String sopClassUid = "";
DvtkData.Dimse.Attribute attribute = dicomFile.DataSet.GetAttribute(DvtkData.Dimse.Tag.SOP_CLASS_UID);
if (attribute != null)
{
UniqueIdentifier uniqueIdentifier = (UniqueIdentifier)attribute.DicomValue;
if (uniqueIdentifier.Values.Count > 0)
{
sopClassUid = uniqueIdentifier.Values[0];
}
}
fileMetaInformation.AddAttribute(Tag.MEDIA_STORAGE_SOP_CLASS_UID.GroupNumber,
Tag.MEDIA_STORAGE_SOP_CLASS_UID.ElementNumber, VR.UI, sopClassUid);
// add the SOP Instance UID
System.String sopInstanceUid = "";
attribute = dicomFile.DataSet.GetAttribute(DvtkData.Dimse.Tag.SOP_INSTANCE_UID);
if (attribute != null)
{
UniqueIdentifier uniqueIdentifier = (UniqueIdentifier)attribute.DicomValue;
if (uniqueIdentifier.Values.Count > 0)
{
sopInstanceUid = uniqueIdentifier.Values[0];
}
}
fileMetaInformation.AddAttribute(Tag.MEDIA_STORAGE_SOP_INSTANCE_UID.GroupNumber,
Tag.MEDIA_STORAGE_SOP_INSTANCE_UID.ElementNumber, VR.UI, sopInstanceUid);
// add the Transfer Syntax UID
fileMetaInformation.AddAttribute(Tag.TRANSFER_SYNTAX_UID.GroupNumber,
Tag.TRANSFER_SYNTAX_UID.ElementNumber, VR.UI, dicomFile.FileHead.TransferSyntax);
// add the Implemenation Class UID
DvtkData.Dimse.Attribute implentationUID = dicomFile.FileMetaInformation.GetAttribute(0x00020012);
fileMetaInformation.AddAttribute(Tag.IMPLEMENTATION_CLASS_UID.GroupNumber,
Tag.IMPLEMENTATION_CLASS_UID.ElementNumber, VR.UI, implentationUID);
// add the Implementation Version Name
DvtkData.Dimse.Attribute implementationVersion = dicomFile.FileMetaInformation.GetAttribute(0x00020013);
fileMetaInformation.AddAttribute(Tag.IMPLEMENTATION_VERSION_NAME.GroupNumber,
Tag.IMPLEMENTATION_VERSION_NAME.ElementNumber, VR.SH, implementationVersion);
// set up the dicomMediaFile contents
dicomMediaFile.FileHead = FileHead;
dicomMediaFile.FileMetaInformation = fileMetaInformation;
dicomMediaFile.DataSet = dicomFile.DataSet;
// write the dicomMediaFile to file
Dvtk.DvtkDataHelper.WriteDataSetToFile(dicomMediaFile, filename);
// save the filename in the dataset
dicomFile.DataSet.Filename = filename;
}
public abstract void AddToInformationModel(DvtkData.Media.DicomFile dicomFile, bool storeFile);
void SaveFileAsDefinedTS(string transferSyntax)
{
if (DCMFile == "")
{
richTextBoxLog.AppendText("There is no Media file to save, please select Media file.\n");
return;
}
try
{
SaveFileDialog saveAsDlg = new SaveFileDialog();
saveAsDlg.Filter = "DCM files (*.dcm) |*.dcm | All files (*.*)|*.*";
FileInfo dcmFileInfo = new FileInfo(DCMFile);
saveAsDlg.InitialDirectory = dcmFileInfo.DirectoryName;
saveAsDlg.FileName = dcmFileInfo.Name;
saveAsDlg.Title = "Save DICOM file...";
if (saveAsDlg.ShowDialog() == DialogResult.OK)
{
richTextBoxLog.AppendText("Saving the modified Media file.\n");
_NewDCMFileName = saveAsDlg.FileName.Trim();
if (DCMFile != _NewDCMFileName)
_IsSavedInNewDCMFile = true;
DvtkData.Media.DicomFile dicomMediaFile = new DvtkData.Media.DicomFile();
// set up the file head
DvtkData.Media.FileHead fileHead = new DvtkData.Media.FileHead();
// add the Transfer Syntax UID
DvtkData.Dul.TransferSyntax tSyntax = new DvtkData.Dul.TransferSyntax(transferSyntax);
fileHead.TransferSyntax = tSyntax;
// set up the file meta information
DvtkData.Media.FileMetaInformation fileMetaInformation = new DvtkData.Media.FileMetaInformation();
// add the FMI version
fileMetaInformation.AddAttribute(DvtkData.Dimse.Tag.FILE_META_INFORMATION_VERSION.GroupNumber,
DvtkData.Dimse.Tag.FILE_META_INFORMATION_VERSION.ElementNumber, VR.OB, 1, 2);
// add the SOP Class UID
fileMetaInformation.AddAttribute(DvtkData.Dimse.Tag.MEDIA_STORAGE_SOP_CLASS_UID.GroupNumber,
DvtkData.Dimse.Tag.MEDIA_STORAGE_SOP_CLASS_UID.ElementNumber, VR.UI, _FileMetaInfo.MediaStorageSOPClassUID);
// add the SOP Instance UID
fileMetaInformation.AddAttribute(DvtkData.Dimse.Tag.MEDIA_STORAGE_SOP_INSTANCE_UID.GroupNumber,
DvtkData.Dimse.Tag.MEDIA_STORAGE_SOP_INSTANCE_UID.ElementNumber, VR.UI, _FileMetaInfo.MediaStorageSOPInstanceUID);
// add the Transfer Syntax UID
fileMetaInformation.AddAttribute(DvtkData.Dimse.Tag.TRANSFER_SYNTAX_UID.GroupNumber,
DvtkData.Dimse.Tag.TRANSFER_SYNTAX_UID.ElementNumber, VR.UI, transferSyntax);
// add the Implemenation Class UID
string implClassUID = "";
if(_FileMetaInfo.Exists("0x00020012"))
{
// Get the Transfer syntax
HLI.Attribute implClassUIDAttr = _FileMetaInfo["0x00020012"];
implClassUID = implClassUIDAttr.Values[0];
}
fileMetaInformation.AddAttribute(DvtkData.Dimse.Tag.IMPLEMENTATION_CLASS_UID.GroupNumber,
DvtkData.Dimse.Tag.IMPLEMENTATION_CLASS_UID.ElementNumber, VR.UI, implClassUID);
// add the Implementation Version Name
string implClassVersion = "";
if(_FileMetaInfo.Exists("0x00020013"))
{
// Get the Transfer syntax
HLI.Attribute implClassVersionAttr = _FileMetaInfo["0x00020013"];
implClassVersion = implClassVersionAttr.Values[0];
}
fileMetaInformation.AddAttribute(DvtkData.Dimse.Tag.IMPLEMENTATION_VERSION_NAME.GroupNumber,
DvtkData.Dimse.Tag.IMPLEMENTATION_VERSION_NAME.ElementNumber, VR.SH, implClassVersion);
// set up the dicomMediaFile contents
dicomMediaFile.FileHead = fileHead;
dicomMediaFile.FileMetaInformation = fileMetaInformation;
dicomMediaFile.DataSet = _DCMdataset.DvtkDataDataSet;
// write the dicomMediaFile to file
Dvtk.DvtkDataHelper.WriteDataSetToFile(dicomMediaFile, _NewDCMFileName);
string theLogText = string.Format("Dataset {0} saved successfully with transfer syntax: {1}.\n\n", _NewDCMFileName, transferSyntax);
richTextBoxLog.AppendText(theLogText);
richTextBoxLog.ScrollToCaret();
richTextBoxLog.Focus();
//Cleanup the FMI & Dataset
IsDCMFileModified = false;
_IsAttributeGroupLengthDefined = false;
_DCMdataset = null;
_FileMetaInfo = null;
if (_IsSavedInNewDCMFile)
{
FileInfo newDcmFileInfo = new FileInfo(_NewDCMFileName);
_IsNewDCMFileLoaded = true;
this.dirListBox.Path = newDcmFileInfo.DirectoryName;
this.fileListBox.Path = this.dirListBox.Path;
this.fileListBox.SelectedItem = newDcmFileInfo.Name;
this.dirListBox.Refresh();
this.fileListBox.Refresh();
//Load the new Media file
LoadDCMFile(_NewDCMFileName);
}
else
{
_IsNewDCMFileLoaded = false;
this.dirListBox.Path = dcmFileInfo.DirectoryName;
this.fileListBox.Path = this.dirListBox.Path;
this.fileListBox.SelectedItem = dcmFileInfo.Name;
//Load the new Media file
LoadDCMFile(DCMFile);
}
UpdateTitleBarText();
}
}
catch (Exception exception)
{
string theErrorText;
theErrorText = string.Format("Media file {0} could not be saved:\n{1}\n\n", _NewDCMFileName, exception.Message);
richTextBoxLog.AppendText(theErrorText);
richTextBoxLog.ScrollToCaret();
richTextBoxLog.Focus();
IsDCMFileModified = false;
UpdateTitleBarText();
}
}
/// <summary>
/// Add the given dataset present in a Dicom File to the Information Model. The data is normalised into the Information Model.
/// </summary>
/// <param name="dicomFile">The dicom File containing the dataset to be added.</param>
/// <param name="storeFile">Boolean indicating whether the dataset should be stored or not.</param>
public override void AddToInformationModel(DvtkData.Media.DicomFile dicomFile, bool storeFile)
{
// STUDY level
PatientStudyInformationEntity patientStudyInformationEntity = null;
this.IsDataStored = storeFile;
// check if the patient/study IE is already in the studyRootList
foreach (PatientStudyInformationEntity lPatientStudyInformationEntity in Root)
{
if (lPatientStudyInformationEntity.IsUniqueTagFoundIn(dicomFile.DataSet))
{
patientStudyInformationEntity = lPatientStudyInformationEntity;
patientStudyInformationEntity.CheckForSpecialTags(dicomFile.DataSet);
break;
}
}
// patient/study IE is not already in the studyRootList
if (patientStudyInformationEntity == null)
{
// create a new patient/study IE from the dataset and add to the studyRootList
patientStudyInformationEntity = new PatientStudyInformationEntity();
patientStudyInformationEntity.CopyFrom(dicomFile.DataSet);
Root.Add(patientStudyInformationEntity);
}
// SERIES level
SeriesInformationEntity seriesInformationEntity = null;
// check if the series IE is already in the study IE children
foreach (SeriesInformationEntity lSeriesInformationEntity in patientStudyInformationEntity.Children)
{
if (lSeriesInformationEntity.IsUniqueTagFoundIn(dicomFile.DataSet))
{
seriesInformationEntity = lSeriesInformationEntity;
seriesInformationEntity.CheckForSpecialTags(dicomFile.DataSet);
break;
}
}
// series IE is not already in the study IE children
if (seriesInformationEntity == null)
{
// create a new series IE from the dataset and add to the study IE children
seriesInformationEntity = new SeriesInformationEntity();
seriesInformationEntity.CopyFrom(dicomFile.DataSet);
patientStudyInformationEntity.AddChild(seriesInformationEntity);
}
// IMAGE (Instance) level
InstanceInformationEntity instanceInformationEntity = null;
// check if the instance IE is already in the series IE children
foreach (InstanceInformationEntity lInstanceInformationEntity in seriesInformationEntity.Children)
{
if (lInstanceInformationEntity.IsUniqueTagFoundIn(dicomFile.DataSet))
{
instanceInformationEntity = lInstanceInformationEntity;
instanceInformationEntity.CheckForSpecialTags(dicomFile.DataSet);
break;
}
}
// instance IE is not already in the series IE children
if (instanceInformationEntity == null)
{
// Store the dicom File as a DCM file if requested.
if (storeFile == true)
{
StoreDicomFile(dicomFile);
}
// create a new instance IE from the dataset and add to the series IE children
instanceInformationEntity = new InstanceInformationEntity(dicomFile.DataSet.Filename);
instanceInformationEntity.CopyFrom(dicomFile.DataSet);
seriesInformationEntity.AddChild(instanceInformationEntity);
}
patientStudyInformationEntity.CheckForSpecialTags(dicomFile.DataSet);
seriesInformationEntity.CheckForSpecialTags(dicomFile.DataSet);
instanceInformationEntity.CheckForSpecialTags(dicomFile.DataSet);
}
public virtual void AddToInformationModel(DvtkData.Media.DicomFile dicomFile, bool storeFile)
{
}
public bool Write(String fullFileName)
{
Dvtk.Sessions.ScriptSession dvtkScriptSession = new Dvtk.Sessions.ScriptSession();
DvtkData.Media.DicomFile dvtkDataDicomFile = new DvtkData.Media.DicomFile();
dvtkDataDicomFile.DataSet = this.dataSet.DvtkDataDataSet;
dvtkDataDicomFile.FileMetaInformation = this.fileMetaInformation.DvtkDataFileMetaInformation;
dvtkDataDicomFile.FileHead = this.dvtkDataFileHead;
return dvtkScriptSession.WriteFile(dvtkDataDicomFile, fullFileName);
}
/// <summary>
/// Store the DICOM file into a DICOM Media File in the current Information Model directory.
/// The file contents might be later used for retrieval.The transfer syntax is also passed so that the TS specified
/// in the dcm file is used while moving the file to a Storage SCP
/// </summary>
/// <param name="dicomFile">The DICOM file to store</param>
protected void StoreDicomFile(DvtkData.Media.DicomFile dicomFile)
{
System.String iom = System.String.Empty;
if (Name.Equals("PatientRootInformationModel"))
{
iom = "PR";
}
else if (Name.Equals("StudyRootInformationModel"))
{
iom = "SR";
}
else if (Name.Equals("PatientStudyOnlyInformationModel"))
{
iom = "PS";
}
// generate a filename
System.String filename;
filename = System.String.Format("{0}\\DVTK_IOM_TMP_{1}_{2:00000000}.DCM", DataDirectory, iom, _fileIndex++);
DvtkData.Media.DicomFile dicomMediaFile = new DvtkData.Media.DicomFile();
// set up the file head
DvtkData.Media.FileHead FileHead = new DvtkData.Media.FileHead();
// add the Transfer Syntax UID
//DvtkData.Dul.TransferSyntax transferSyntax = new DvtkData.Dul.TransferSyntax(DvtkData.Dul.TransferSyntax.Explicit_VR_Little_Endian.UID);
FileHead.TransferSyntax = dicomFile.FileHead.TransferSyntax;
// set up the file meta information
DvtkData.Media.FileMetaInformation fileMetaInformation = new DvtkData.Media.FileMetaInformation();
// add the FMI version
fileMetaInformation.AddAttribute(Tag.FILE_META_INFORMATION_VERSION.GroupNumber,
Tag.FILE_META_INFORMATION_VERSION.ElementNumber, VR.OB, 1, 2);
// add the SOP Class UID
System.String sopClassUid = "";
DvtkData.Dimse.Attribute attribute = dicomFile.DataSet.GetAttribute(DvtkData.Dimse.Tag.SOP_CLASS_UID);
if (attribute != null)
{
UniqueIdentifier uniqueIdentifier = (UniqueIdentifier)attribute.DicomValue;
if (uniqueIdentifier.Values.Count > 0)
{
sopClassUid = uniqueIdentifier.Values[0];
}
}
fileMetaInformation.AddAttribute(Tag.MEDIA_STORAGE_SOP_CLASS_UID.GroupNumber,
Tag.MEDIA_STORAGE_SOP_CLASS_UID.ElementNumber, VR.UI, sopClassUid);
// add the SOP Instance UID
System.String sopInstanceUid = "";
attribute = dicomFile.DataSet.GetAttribute(DvtkData.Dimse.Tag.SOP_INSTANCE_UID);
if (attribute != null)
{
UniqueIdentifier uniqueIdentifier = (UniqueIdentifier)attribute.DicomValue;
if (uniqueIdentifier.Values.Count > 0)
{
sopInstanceUid = uniqueIdentifier.Values[0];
}
}
fileMetaInformation.AddAttribute(Tag.MEDIA_STORAGE_SOP_INSTANCE_UID.GroupNumber,
Tag.MEDIA_STORAGE_SOP_INSTANCE_UID.ElementNumber, VR.UI, sopInstanceUid);
// add the Transfer Syntax UID
fileMetaInformation.AddAttribute(Tag.TRANSFER_SYNTAX_UID.GroupNumber,
Tag.TRANSFER_SYNTAX_UID.ElementNumber, VR.UI, dicomFile.FileHead.TransferSyntax);
// add the Implemenation Class UID
DvtkData.Dimse.Attribute implentationUID = dicomFile.FileMetaInformation.GetAttribute(0x00020012);
fileMetaInformation.AddAttribute(Tag.IMPLEMENTATION_CLASS_UID.GroupNumber,
Tag.IMPLEMENTATION_CLASS_UID.ElementNumber, VR.UI, implentationUID);
// add the Implementation Version Name
DvtkData.Dimse.Attribute implementationVersion = dicomFile.FileMetaInformation.GetAttribute(0x00020013);
fileMetaInformation.AddAttribute(Tag.IMPLEMENTATION_VERSION_NAME.GroupNumber,
Tag.IMPLEMENTATION_VERSION_NAME.ElementNumber, VR.SH, implementationVersion);
// set up the dicomMediaFile contents
dicomMediaFile.FileHead = FileHead;
dicomMediaFile.FileMetaInformation = fileMetaInformation;
dicomMediaFile.DataSet = dicomFile.DataSet;
// write the dicomMediaFile to file
Dvtk.DvtkDataHelper.WriteDataSetToFile(dicomMediaFile, filename);
// save the filename in the dataset
dicomFile.DataSet.Filename = filename;
}
