public void test_KineticLaw_getParameterById() { Parameter k1 = new Parameter(2,4); Parameter k2 = new Parameter(2,4); k1.setId( "k1"); k2.setId( "k2"); k1.setValue(3.14); k2.setValue(2.72); M.addParameter(k1); M.addParameter(k2); Reaction r1 = new Reaction(2,4); r1.setId( "reaction_1" ); KineticLaw kl = new KineticLaw(2,4); kl.setFormula( "k1 * X0"); Parameter k3 = new Parameter(2,4); Parameter k4 = new Parameter(2,4); k3.setId( "k1"); k4.setId( "k2"); k3.setValue(2.72); k4.setValue(3.14); kl.addParameter(k3); kl.addParameter(k4); r1.setKineticLaw(kl); M.addReaction(r1); KineticLaw kl1 = M.getReaction(0).getKineticLaw(); assertNotEquals(kl1.getParameter( "k1" ),k3); assertNotEquals(kl1.getParameter( "k1" ),k1); assertNotEquals(kl1.getParameter( "k2" ),k4); assertEquals(kl1.getParameter( "k3" ),null); }
public void test_KineticLaw_parent_add() { KineticLaw kl = new KineticLaw(2,4); Reaction r = new Reaction(2,4); r.setKineticLaw(kl); assertTrue( r == r.getKineticLaw().getParentSBMLObject() ); r = null; }
public void test_KineticLaw_ancestor_add() { KineticLaw kl = new KineticLaw(2,4); Reaction r = new Reaction(2,4); r.setKineticLaw(kl); KineticLaw obj = r.getKineticLaw(); assertTrue( obj.getAncestorOfType(libsbml.SBML_REACTION) == r ); assertTrue( obj.getAncestorOfType(libsbml.SBML_MODEL) == null ); assertTrue( obj.getAncestorOfType(libsbml.SBML_DOCUMENT) == null ); r = null; }
public void test_KineticLaw_parent_add() { KineticLaw kl = new KineticLaw(2,4); kl.setMath(libsbml.parseFormula("1")); Reaction r = new Reaction(2, 4); r.setKineticLaw(kl); assertTrue( r == r.getKineticLaw().getParentSBMLObject() ); r = null; }
public void test_Reaction_copyConstructor() { Reaction o1 = new Reaction(2,4); o1.setId("c"); assertTrue( o1.getId() == "c" ); KineticLaw kl = new KineticLaw(2,4); kl.setMath(libsbml.parseFormula("1")); o1.setKineticLaw(kl); kl = null; assertTrue( o1.isSetKineticLaw() == true ); assertNotEquals(o1.getKineticLaw(),null); Reaction o2 = new Reaction(o1); assertTrue( o2.getId() == "c" ); assertTrue( o2.isSetKineticLaw() == true ); assertNotEquals(o2.getKineticLaw(),null); assertTrue( o2.getParentSBMLObject() == o1.getParentSBMLObject() ); o2 = null; o1 = null; }
public void test_Reaction_clone() { Reaction o1 = new Reaction(2,4); o1.setId("c"); assertTrue( o1.getId() == "c" ); KineticLaw kl = new KineticLaw(2,4); o1.setKineticLaw(kl); kl = null; assertTrue( o1.isSetKineticLaw() == true ); assertNotEquals(o1.getKineticLaw(),null); Reaction o2 = o1.clone(); assertTrue( o2.getId() == "c" ); assertTrue( o2.isSetKineticLaw() == true ); assertNotEquals(o2.getKineticLaw(),null); assertTrue( o2.getParentSBMLObject() == o1.getParentSBMLObject() ); o2 = null; o1 = null; }