/// <summary> /// [ EventStruct ] /// [[ Id , Name , StringTrigger , StringDelay , TimeUnit , [[ VariableAssignment , StringAssignment ]] ]] /// </summary> /// <param name="aSBMLmodel"></param> /// <returns></returns> public static List<EventStruct> getEvent(Model aSBMLmodel) { List<EventStruct> list = new List<EventStruct>(); ListOfEvents events = aSBMLmodel.getListOfEvents(); for (int i = 0; i < events.size(); i++ ) { Event anEvent = aSBMLmodel.getEvent(i); string anId_Ev = anEvent.getId(); string aName_Ev = anEvent.getName(); Trigger anASTNode_Ev_Tr = anEvent.getTrigger(); string aString_Ev_Tr = libsbml.libsbml.formulaToString(anASTNode_Ev_Tr.getMath()); Delay anASTNode_Ev_De = anEvent.getDelay(); string aString_Ev_De = libsbml.libsbml.formulaToString(anASTNode_Ev_Tr.getMath()); string aTimeUnit_Ev = anEvent.getTimeUnits(); List<EventAssignmentStruct> listOfEventAssignments = new List<EventAssignmentStruct>(); ListOfEventAssignments assignments = anEvent.getListOfEventAssignments(); for (int j = 0; j < assignments.size(); j++ ) { EventAssignment anEventAssignment = anEvent.getEventAssignment(j); string aVariable_Ev_As = anEventAssignment.getVariable(); ASTNode anASTNode_Ev_As = anEventAssignment.getMath(); string aString_Ev_As = libsbml.libsbml.formulaToString(anASTNode_Ev_As); EventAssignmentStruct listOfEventAssignment = new EventAssignmentStruct( aVariable_Ev_As, aString_Ev_As); listOfEventAssignments.Add(listOfEventAssignment); } EventStruct eventStruct = new EventStruct( anId_Ev, aName_Ev, aString_Ev_Tr, aString_Ev_De, aTimeUnit_Ev, listOfEventAssignments); list.Add(eventStruct); } return list; }
public void test_Event_parent_create() { Model m = new Model(2,4); Event e = m.createEvent(); ListOf lo = m.getListOfEvents(); assertTrue( lo == m.getEvent(0).getParentSBMLObject() ); assertTrue( lo == e.getParentSBMLObject() ); assertTrue( m == lo.getParentSBMLObject() ); }
public void test_Event_parent_add() { Event e = new Event(2,4); Trigger t = new Trigger(2,4); e.setTrigger(t); e.createEventAssignment(); Model m = new Model(2,4); m.addEvent(e); e = null; ListOf lo = m.getListOfEvents(); assertTrue( lo == m.getEvent(0).getParentSBMLObject() ); assertTrue( m == lo.getParentSBMLObject() ); }
public void test_Event_ancestor_create() { Model m = new Model(2,4); Event e = m.createEvent(); ListOf lo = m.getListOfEvents(); assertTrue( e.getAncestorOfType(libsbml.SBML_MODEL) == m ); assertTrue( e.getAncestorOfType(libsbml.SBML_LIST_OF) == lo ); assertTrue( e.getAncestorOfType(libsbml.SBML_DOCUMENT) == null ); assertTrue( e.getAncestorOfType(libsbml.SBML_PARAMETER) == null ); Event obj = m.getEvent(0); assertTrue( obj.getAncestorOfType(libsbml.SBML_MODEL) == m ); assertTrue( obj.getAncestorOfType(libsbml.SBML_LIST_OF) == lo ); assertTrue( obj.getAncestorOfType(libsbml.SBML_DOCUMENT) == null ); assertTrue( obj.getAncestorOfType(libsbml.SBML_EVENT) == null ); }
public void test_Event_ancestor_add() { Event e = new Event(2,4); Model m = new Model(2,4); Trigger t = new Trigger(2,4); e.setTrigger(t); e.createEventAssignment(); m.addEvent(e); e = null; ListOf lo = m.getListOfEvents(); Event obj = m.getEvent(0); assertTrue( obj.getAncestorOfType(libsbml.SBML_MODEL) == m ); assertTrue( obj.getAncestorOfType(libsbml.SBML_LIST_OF) == lo ); assertTrue( obj.getAncestorOfType(libsbml.SBML_DOCUMENT) == null ); assertTrue( obj.getAncestorOfType(libsbml.SBML_COMPARTMENT) == null ); }
public void test_ReadSBML_metaid_ListOf() { SBase sb; string s = wrapSBML_L2v1("<listOfFunctionDefinitions metaid='lofd'/>" + "<listOfUnitDefinitions metaid='loud'/>" + "<listOfCompartments metaid='loc'/>" + "<listOfSpecies metaid='los'/>" + "<listOfParameters metaid='lop'/>" + "<listOfRules metaid='lor'/>" + "<listOfReactions metaid='lorx'/>" + "<listOfEvents metaid='loe'/>"); D = libsbml.readSBMLFromString(s); M = D.getModel(); assertTrue( M != null ); sb = M.getListOfFunctionDefinitions(); assertEquals( true, sb.isSetMetaId() ); assertTrue(( "lofd" == sb.getMetaId() )); sb = M.getListOfUnitDefinitions(); assertEquals( true, sb.isSetMetaId() ); assertTrue(( "loud" == sb.getMetaId() )); sb = M.getListOfCompartments(); assertEquals( true, sb.isSetMetaId() ); assertTrue(( "loc" == sb.getMetaId() )); sb = M.getListOfSpecies(); assertEquals( true, sb.isSetMetaId() ); assertTrue(( "los" == sb.getMetaId() )); sb = M.getListOfParameters(); assertEquals( true, sb.isSetMetaId() ); assertTrue(( "lop" == sb.getMetaId() )); sb = M.getListOfRules(); assertEquals( true, sb.isSetMetaId() ); assertTrue(( "lor" == sb.getMetaId() )); sb = M.getListOfReactions(); assertEquals( true, sb.isSetMetaId() ); assertTrue(( "lorx" == sb.getMetaId() )); sb = M.getListOfEvents(); assertEquals( true, sb.isSetMetaId() ); assertTrue(( "loe" == sb.getMetaId() )); }