public void Write(BinaryWriter writer) { writer.Write(mass); writer.Write(deltaMass); writer.Write(sequence); if (modifications == null) { modifications = new PeptideModificationState(sequence.Length); } modifications.Write(writer); writer.Write(mascotScore); writer.Write(altScore); writer.Write(pep); int len = proteinIndex.Length; writer.Write(len); for (int i = 0; i < len; i++) { writer.Write(proteinIndex[i]); } }
public void Write(BinaryWriter writer) { writer.Write(rawFileIndex); writer.Write(scanNumber); writer.Write(silacIndex); switch (type) { case MascotQueryType.Silac: writer.Write((byte)0); break; case MascotQueryType.Isotope: writer.Write((byte)1); break; case MascotQueryType.Peak: writer.Write((byte)2); break; } writer.Write(pep); writer.Write(score); writer.Write(altScore); writer.Write(deltaScoreAll); writer.Write(deltaScoreDifferentPep); labelModifications.Write(writer); trueModifications.Write(writer); writer.Write(elutionTime); writer.Write(id); writer.Write(mz); writer.Write(monoisotopicMz); writer.Write(evidenceId); writer.Write(ptmScore); writer.Write(deltaPtmScore); writer.Write(ptmScoreCounts); writer.Write(ptmScoreFinished); writer.Write(MassErrorPpm); writer.Write(changed); writer.Write(description.Length); for (int i = 0; i < description.Length; i++) { description[i].Write(writer); writer.Write(intensities[i]); writer.Write(massDiffs[i]); } writer.Write(charge); ushort[] keys = DataUtil.GetKeys(modProbabilities); writer.Write(keys.Length); for (int i = 0; i < keys.Length; i++) { writer.Write(keys[i]); } foreach (ushort key in keys) { double[] value = modProbabilities[key]; writer.Write(value.Length); for (int i = 0; i < value.Length; i++) { writer.Write(value[i]); } } keys = DataUtil.GetKeys(modScoreDiffs); writer.Write(keys.Length); for (int i = 0; i < keys.Length; i++) { writer.Write(keys[i]); } foreach (ushort key in keys) { double[] value = modScoreDiffs[key]; writer.Write(value.Length); for (int i = 0; i < value.Length; i++) { writer.Write(value[i]); } } }