public void ClearingAncestralAllele() { var saReader = ResourceUtilities.GetSupplementaryAnnotationReader(Resources.MiniSuppAnnot("chrX_2957282_2957284.nsa")); VcfUtilities.FieldDoesNotContain(saReader, "chrX 2957282 . A G 100 PASS .", "AA=", VcfCommon.InfoIndex); }
public void DuplicateEntryRefMinor() { // the following entry should not get refMinor tag. It has conflicting entries in 1kg and should have no allele frequency related info var saReader = ResourceUtilities.GetSupplementaryAnnotationReader(Resources.MiniSuppAnnot("chrX_1389061_1389062.nsa")); VcfUtilities.FieldDoesNotContain(saReader, "X 1389061 . A C 100 PASS AC=3235", "RefMinor", VcfCommon.InfoIndex); }