public void test_Compartment_setSpatialDimensions1() { int i = C.setSpatialDimensions(2); assertTrue(i == libsbml.LIBSBML_UNEXPECTED_ATTRIBUTE); assertTrue(C.getSpatialDimensions() == 3); }
public void test_L3_Compartment_initDefaults() { Compartment c = new Compartment(3, 1); c.setId("A"); assertEquals(true, c.isSetId()); assertEquals(false, c.isSetName()); assertEquals(false, c.isSetSize()); assertEquals(false, c.isSetVolume()); assertEquals(false, c.isSetUnits()); assertEquals(false, c.isSetConstant()); assertEquals(false, c.isSetSpatialDimensions()); c.initDefaults(); assertTrue(("A" == c.getId())); assertTrue(c.getName() == ""); assertTrue(("litre" == c.getUnits())); assertTrue(c.getSpatialDimensions() == 3); assertTrue(c.getSize() == 1); assertTrue(c.getConstant() == true); assertEquals(true, c.isSetId()); assertEquals(false, c.isSetName()); assertEquals(false, c.isSetSize()); assertEquals(false, c.isSetVolume()); assertEquals(true, c.isSetUnits()); assertEquals(true, c.isSetConstant()); assertEquals(true, c.isSetSpatialDimensions()); c = null; }
public void test_Compartment_setSpatialDimensions5() { Compartment c = new Compartment(2, 2); int i = c.setSpatialDimensions(2.2); assertTrue(i == libsbml.LIBSBML_INVALID_ATTRIBUTE_VALUE); assertTrue(c.getSpatialDimensions() == 3); c = null; }
public void test_Compartment_setSpatialDimensions4() { Compartment c = new Compartment(2, 2); int i = c.setSpatialDimensions(2.0); assertTrue(i == libsbml.LIBSBML_OPERATION_SUCCESS); assertTrue(c.getSpatialDimensions() == 2); c = null; }
public void test_Compartment_create() { assertTrue(C.getTypeCode() == libsbml.SBML_COMPARTMENT); assertTrue(C.getMetaId() == ""); assertTrue(C.getNotes() == null); assertTrue(C.getAnnotation() == null); assertTrue(C.getId() == ""); assertTrue(C.getName() == ""); assertTrue(C.getUnits() == ""); assertTrue(C.getOutside() == ""); assertTrue(C.getSpatialDimensions() == 3); assertTrue(C.getVolume() == 1.0); assertTrue(C.getConstant() == true); assertEquals(false, C.isSetId()); assertEquals(false, C.isSetName()); assertEquals(false, C.isSetSize()); assertEquals(false, C.isSetVolume()); assertEquals(false, C.isSetUnits()); assertEquals(false, C.isSetOutside()); }
public void test_Compartment_createWith() { Compartment c = new Compartment(2, 4); c.setId("A"); assertTrue(c.getTypeCode() == libsbml.SBML_COMPARTMENT); assertTrue(c.getMetaId() == ""); assertTrue(c.getNotes() == null); assertTrue(c.getAnnotation() == null); assertTrue(c.getName() == ""); assertTrue(c.getSpatialDimensions() == 3); assertTrue(("A" == c.getId())); assertTrue(c.getConstant() == true); assertEquals(true, c.isSetId()); assertEquals(false, c.isSetName()); c = null; }
/// <summary> /// Sets the dimension of a MoBi container to the Unit of the SBML compartment. /// </summary> private IParameter SetDimension(Compartment compartment, IParameter sizeParameter) { var spatialDimensions = compartment.getSpatialDimensions(); IDimension sizeDimension; switch (spatialDimensions) { case (SBMLConstants.SBML_CONTAINER_3D): sizeDimension = !compartment.isSetUnits() ? _dimensionFactory.Dimension(Constants.Dimension.VOLUME) : GetDimensionFromSBMLUnit(compartment.getUnits()); break; case (SBMLConstants.SBML_CONTAINER_2D): sizeDimension = !compartment.isSetUnits() ? _dimensionFactory.Dimension(SBMLConstants.AREA) : GetDimensionFromSBMLUnit(compartment.getUnits()); break; case (SBMLConstants.SBML_CONTAINER_1D): sizeDimension = !compartment.isSetUnits() ? _dimensionFactory.Dimension(SBMLConstants.LENGTH) : GetDimensionFromSBMLUnit(compartment.getUnits()); break; case (SBMLConstants.SBML_CONTAINER_NO): //no size & units allowed return(null); default: sizeDimension = _dimensionFactory.Dimension(Constants.Dimension.DIMENSIONLESS); break; } if (sizeDimension != null) { sizeParameter.Dimension = sizeDimension; } return(sizeParameter); }
public void test_Compartment_createWithNS() { XMLNamespaces xmlns = new XMLNamespaces(); xmlns.add("http://www.sbml.org", "testsbml"); SBMLNamespaces sbmlns = new SBMLNamespaces(2, 1); sbmlns.addNamespaces(xmlns); Compartment c = new Compartment(sbmlns); assertTrue(c.getTypeCode() == libsbml.SBML_COMPARTMENT); assertTrue(c.getMetaId() == ""); assertTrue(c.getNotes() == null); assertTrue(c.getAnnotation() == null); assertTrue(c.getLevel() == 2); assertTrue(c.getVersion() == 1); assertTrue(c.getNamespaces() != null); assertTrue(c.getNamespaces().getLength() == 2); assertTrue(c.getName() == ""); assertTrue(c.getSpatialDimensions() == 3); assertTrue(c.getConstant() == true); c = null; }