public void populateFromMSData(MSData msInfo) { hasDetails = true; spectra = msInfo.run.spectrumList == null ? 0 : msInfo.run.spectrumList.size(); ionSource = analyzer = detector = ""; foreach (InstrumentConfiguration ic in msInfo.instrumentConfigurationList) { SortedDictionary <int, string> ionSources = new SortedDictionary <int, string>(); SortedDictionary <int, string> analyzers = new SortedDictionary <int, string>(); SortedDictionary <int, string> detectors = new SortedDictionary <int, string>(); foreach (pwiz.CLI.msdata.Component c in ic.componentList) { CVParam term; switch (c.type) { case ComponentType.ComponentType_Source: term = c.cvParamChild(CVID.MS_ionization_type); if (!term.empty()) { ionSources.Add(c.order, term.name); } break; case ComponentType.ComponentType_Analyzer: term = c.cvParamChild(CVID.MS_mass_analyzer_type); if (!term.empty()) { analyzers.Add(c.order, term.name); } break; case ComponentType.ComponentType_Detector: term = c.cvParamChild(CVID.MS_detector_type); if (!term.empty()) { detectors.Add(c.order, term.name); } break; } } if (ionSource.Length > 0) { ionSource += ", "; } ionSource += String.Join("/", new List <string>(ionSources.Values).ToArray()); if (analyzer.Length > 0) { analyzer += ", "; } analyzer += String.Join("/", new List <string>(analyzers.Values).ToArray()); if (detector.Length > 0) { detector += ", "; } detector += String.Join("/", new List <string>(detectors.Values).ToArray()); } System.Collections.Generic.Set <string> contentTypes = new System.Collections.Generic.Set <string>(); CVParamList cvParams = msInfo.fileDescription.fileContent.cvParams; if (cvParams.Count > 0) { foreach (CVParam term in msInfo.fileDescription.fileContent.cvParams) { contentTypes.Add(term.name); } contentType = String.Join(", ", new List <string>(contentTypes.Keys).ToArray()); } }
public void populateFromMSData( MSData msInfo ) { hasDetails = true; spectra = msInfo.run.spectrumList == null ? 0 : msInfo.run.spectrumList.size(); ionSource = analyzer = detector = ""; foreach( InstrumentConfiguration ic in msInfo.instrumentConfigurationList ) { SortedDictionary<int, string> ionSources = new SortedDictionary<int, string>(); SortedDictionary<int, string> analyzers = new SortedDictionary<int, string>(); SortedDictionary<int, string> detectors = new SortedDictionary<int, string>(); foreach( pwiz.CLI.msdata.Component c in ic.componentList ) { CVParam term; switch( c.type ) { case ComponentType.ComponentType_Source: term = c.cvParamChild( CVID.MS_ionization_type ); if( !term.empty() ) ionSources.Add( c.order, term.name ); break; case ComponentType.ComponentType_Analyzer: term = c.cvParamChild( CVID.MS_mass_analyzer_type ); if( !term.empty() ) analyzers.Add( c.order, term.name ); break; case ComponentType.ComponentType_Detector: term = c.cvParamChild( CVID.MS_detector_type ); if( !term.empty() ) detectors.Add( c.order, term.name ); break; } } if( ionSource.Length > 0 ) ionSource += ", "; ionSource += String.Join( "/", new List<string>( ionSources.Values ).ToArray() ); if( analyzer.Length > 0 ) analyzer += ", "; analyzer += String.Join( "/", new List<string>( analyzers.Values ).ToArray() ); if( detector.Length > 0 ) detector += ", "; detector += String.Join( "/", new List<string>( detectors.Values ).ToArray() ); } System.Collections.Generic.Set<string> contentTypes = new System.Collections.Generic.Set<string>(); CVParamList cvParams = msInfo.fileDescription.fileContent.cvParams; if( cvParams.Count > 0 ) { foreach( CVParam term in msInfo.fileDescription.fileContent.cvParams ) contentTypes.Add( term.name ); contentType = String.Join( ", ", new List<string>( contentTypes.Keys ).ToArray() ); } }