public void OutputResultsForSelected300MassTags_C13() { FileInputsInfo fileInputs = new FileInputsInfo(); fileInputs.DatasetDirectory = @"F:\Yellowstone\RawData"; fileInputs.ResultsSaveFilePath = @"C:\Users\d3x720\Documents\PNNL\My_DataAnalysis\2012\C12C13YellowStone\2012_04_27_ASMS_Data\Yellow_C13_Visuals"; fileInputs.TargetsFilePath = @"C:\Users\d3x720\Documents\PNNL\My_DataAnalysis\2012\C12C13YellowStone\2012_04_27_ASMS_Data\Yellow_C13_withSelected300MassTags_results.txt"; fileInputs.ParameterFilePath = @"\\protoapps\UserData\Slysz\Standard_Testing\Targeted_FeatureFinding\SIPPER_standard_testing\SipperTargetedWorkflowParameters1.xml"; ResultImageOutputter imageOutputter = new ResultImageOutputter(fileInputs); imageOutputter.Execute(); }
public void OutputResultsForLaurey() { FileInputsInfo fileInputs = new FileInputsInfo(); fileInputs.DatasetDirectory = @"F:\Yellowstone\RawData"; fileInputs.ResultsSaveFilePath = @"\\protoapps\UserData\Slysz\Data\Yellowstone\SIPPER\Results\Iteration05_Sum05_newColumns\Visuals"; fileInputs.TargetsFilePath = @"\\protoapps\UserData\Slysz\Data\Yellowstone\SIPPER\Results\Iteration05_Sum05_newColumns\_Yellow_C13_Enriched_results.txt"; fileInputs.ParameterFilePath = @"\\protoapps\UserData\Slysz\Standard_Testing\Targeted_FeatureFinding\SIPPER_standard_testing\SipperTargetedWorkflowParameters1.xml"; ResultImageOutputter imageOutputter = new ResultImageOutputter(fileInputs); imageOutputter.Execute(); }
public void OutputResultsForASMS_1() { FileInputsInfo fileInputs = new FileInputsInfo(); fileInputs.DatasetDirectory = @"F:\Yellowstone\RawData"; fileInputs.ResultsSaveFilePath = @"C:\Users\d3x720\Documents\PNNL\My_DataAnalysis\2012\C12C13YellowStone\2012_04_27_ASMS_Data\Yellow_C13_070_23Mar10_Griffin_10-01-28_nonRedundant\Visuals"; fileInputs.TargetsFilePath = @"C:\Users\d3x720\Documents\PNNL\My_DataAnalysis\2012\C12C13YellowStone\2012_04_27_ASMS_Data\Yellow_C13_070_23Mar10_Griffin_10-01-28_nonRedundant\Yellow_C13_070_23Mar10_Griffin_10-01-28_nonRedundant_enriched_results.txt"; fileInputs.ParameterFilePath = @"\\protoapps\UserData\Slysz\Data\Yellowstone\SIPPER\SipperTargetedWorkflowParameters_Sum5.xml"; ResultImageOutputter imageOutputter = new ResultImageOutputter(fileInputs); imageOutputter.Execute(); }
public void ViewProteinResultsAcrossAllDatasets() { FileInputsInfo fileInputs = new FileInputsInfo(); fileInputs.DatasetDirectory = @"F:\Yellowstone\RawData"; fileInputs.ResultsSaveFilePath = @"C:\Users\d3x720\Documents\PNNL\My_DataAnalysis\2012\C12C13YellowStone\2012_06_25_SipperQuant_testing\ProteinCentricResults\Visuals"; fileInputs.TargetsFilePath = @"C:\Users\d3x720\Documents\PNNL\My_DataAnalysis\2012\C12C13YellowStone\2012_06_25_SipperQuant_testing\ProteinCentricResults\Targets\ref38803_results.txt"; fileInputs.ParameterFilePath = @"\\protoapps\UserData\Slysz\Data\Yellowstone\SIPPER\SipperTargetedWorkflowParameters_Sum5.xml"; ResultImageOutputter imageOutputter = new ResultImageOutputter(fileInputs); imageOutputter.Execute(); }
public void Test1() { FileInputsInfo fileInputs = new FileInputsInfo(); fileInputs.DatasetDirectory = @"D:\Data\Sipper"; fileInputs.ResultsSaveFilePath = @"D:\Data\Temp\Results\Visuals"; fileInputs.TargetsFilePath = @"\\protoapps\UserData\Slysz\Standard_Testing\Targeted_FeatureFinding\SIPPER_standard_testing\Yellow_C13_070_23Mar10_Griffin_10-01-28_testing_results.txt"; fileInputs.ParameterFilePath = @"\\protoapps\UserData\Slysz\Standard_Testing\Targeted_FeatureFinding\SIPPER_standard_testing\SipperTargetedWorkflowParameters1.xml"; ResultImageOutputter imageOutputter = new ResultImageOutputter(fileInputs); imageOutputter.Execute(); }
public void CreateImages() { if (string.IsNullOrEmpty(FileInputs.DatasetParentFolder)) { GeneralStatusMessage = "Cannot create images. Dataset directory has not been defined. Please enter a path to the directory that contains the dataset."; return; } var imageOutputter = new ResultImageOutputter(_fileInputsInfo); imageOutputter.Execute(); }