public void TestParseFromVersion_27_12_WithoutDuplicatedReferencesCheck()
{
var parser = new OutParser(false);
IIdentifiedSpectrum peptide = parser.ParseFromFile(@TestContext.CurrentContext.TestDirectory + "/../../../data//mouseliver.4587.4587.2.out");
Assert.IsNotNull(peptide);
Assert.AreEqual("20030714_MouseLiver_2,4587", peptide.Query.FileScan.ShortFileName);
Assert.AreEqual("-.S*AILS*NTPS*LLALR.-", peptide.Peptides[0].Sequence);
Assert.AreEqual("Q8VI59", peptide.Peptides[0].Proteins[0]);
Assert.AreEqual(1696.6531, peptide.TheoreticalMH, 0.0001);
Assert.AreEqual(1695.9512, peptide.ExperimentalMH, 0.0001);
}
public SequestOutZipParser(bool raiseDuplicatedReferenceAbsentException, double modificationDeltaScore)
{
this.parser = new ModificationOutParser(raiseDuplicatedReferenceAbsentException, modificationDeltaScore);
}
public SequestOutZipParser(bool raiseDuplicatedReferenceAbsentException)
{
this.parser = new OutParser(raiseDuplicatedReferenceAbsentException);
}
public void TestParseFromVersion_27_12_WithDuplicatedReferencesCheck()
{
var parser = new OutParser(true);
parser.ParseFromFile(@TestContext.CurrentContext.TestDirectory + "/../../../data//mouseliver.4587.4587.2.out");
}
