private void cmbSeqDB_SelectedIndexChanged(object sender, EventArgs e)
{
if (cmbSeqDB.SelectedIndex == 0) // empty = none = reset
{
menuStrip1.Enabled = false;
btnDeleteDB.Enabled = false;
txtDB.Text = txtPath.Text = txtVersions.Text = AppConfigHelper.seqdbConfig.LastDBSelected = string.Empty;
lblKipper.Visible = false;
lstSampleIDs.Items.Clear();
chkDetailSamples.Enabled = false;
lstSampleIDs.Enabled = false;
AppConfigHelper.SaveConfig();
}
else if (cmbSeqDB.SelectedIndex == 1) // New
{
BioSeqNewDB frmNewDB = new BioSeqNewDB();
DialogResult rc = frmNewDB.ShowDialog();
if (rc == DialogResult.OK) // then the config has the specs for the new db to select.
{
Cursor.Current = Cursors.WaitCursor;
// If necessary, copy local files to server.
string fastaPath = AppConfigHelper.Build_DBInput();
if (IsServiceClass.IsService && !string.IsNullOrEmpty(fastaPath))
{
if (fastaPath.StartsWith("[L]") || !fastaPath.StartsWith("["))
{
ServiceCallHelper.ResetFastaFolder(AppConfigHelper.LoggedOnUser);
string[] folders = Directory.GetDirectories(DirectoryHelper.CleanPath(fastaPath));
foreach (string folder in folders)
{
string[] files = Directory.GetFiles(folder, "*.fasta", SearchOption.TopDirectoryOnly);
foreach (string file in files)
{
DirectoryHelper.FileCopy("[L]" + file, "[S]" + AppConfigHelper.UserFolder() + "FastaFiles", true);
}
files = Directory.GetFiles(folder, "*.fna", SearchOption.TopDirectoryOnly);
foreach (string file in files)
{
DirectoryHelper.FileCopy("[L]" + file, "[S]" + AppConfigHelper.UserFolder() + "FastaFiles", true);
}
files = Directory.GetFiles(folder, "*.fa", SearchOption.TopDirectoryOnly);
foreach (string file in files)
{
DirectoryHelper.FileCopy("[L]" + file, "[S]" + AppConfigHelper.UserFolder() + "FastaFiles", true);
}
}
}
}
if (!string.IsNullOrEmpty(AppConfigHelper.BuildTreeWildReference())) // This is the standard genome for the new database.
{
// Wherever it is, store it temporarily in the UserFolder.
DirectoryHelper.FileCopy(AppConfigHelper.BuildTreeWildReference(), "[S]" + AppConfigHelper.UserFolder(), true);
}
/////////// Call Build_DB in SeqDB.
try
{
ServiceCallHelper.Build_DB(AppConfigHelper.LoggedOnUser, AppConfigHelper.JsonConfig());
}
catch (Exception ex)
{
Cursor.Current = Cursors.Default;
MessageBox.Show("Error: " + ex.ToString(), "ERROR", MessageBoxButtons.OK);
return;
}
if (AppConfigHelper.LastError.Length > 0)
{
Cursor.Current = Cursors.Default;
MessageBox.Show("Error: " + AppConfigHelper.LastError, "ERROR", MessageBoxButtons.OK);
return;
}
if (string.IsNullOrEmpty(AppConfigHelper.BuildTreeDomesticReference))
{
AppConfigHelper.BuildTreeDomesticReference = AppConfigHelper.BuildTreeWildReference();
AppConfigHelper.SaveConfig();
}
ServiceCallHelper.LoadConfig(AppConfigHelper.LoggedOnUser);
PopulateDBDropdownAndSelect();
Cursor.Current = Cursors.Default;
}
}
else // a database is selected.
{
Cursor.Current = Cursors.WaitCursor;
AppConfigHelper.seqdbConfig.LastDBSelected = cmbSeqDB.SelectedItem.ToString();
AppConfigHelper.SaveConfig();
menuStrip1.Enabled = true;
btnDeleteDB.Enabled = true;
chkDetailSamples.Enabled = true;
lstSampleIDs.Enabled = true;
txtVersions.Text = string.Empty;
lstSampleIDs.Items.Clear();
SeqDB db = AppConfigHelper.seqdbConfig.seqDBs[AppConfigHelper.seqdbConfig.LastDBSelected];
txtDB.Text = db.DBName;
txtPath.Text = db.DBPath;
AppConfigHelper.LastError = string.Empty;
if (SampleIDsBusyFlag || VersionsBusyFlag)
{
MessageBox.Show("Version information and sample IDs are being loaded for previous database. Please select " +
db.DBName + " again.", "Warning", MessageBoxButtons.OK);
return;
}
// Version information comes from the global config.
RefreshVersionInformation(AppConfigHelper.seqdbConfigGlobal.seqDBs[AppConfigHelper.seqdbConfig.LastDBSelected]);
// Also get sample IDs into listbox.
ReloadSampleIDs();
Cursor.Current = Cursors.Default;
if (AppConfigHelper.LastError.Length > 0)
{
MessageBox.Show("Error: " + AppConfigHelper.LastError, "ERROR", MessageBoxButtons.OK);
}
}
}
