/// <summary>
/// Retrieves a plate description from the web service.
/// </summary>
/// <param name="robot">The robot to find the plate type for.</param>
/// <param name="plateID">The <c>plateID</c> of the plate.</param>
/// <returns>The <c>IPlateInfo</c> describing the plate.</returns>
public IPlateInfo FetchPlateInfo(IRobot robot, string plateID)
{
// Check arguments - do it up front to avoid possible inconsistencies later
if (robot == null)
{
throw new System.NullReferenceException("robot must not be null");
}
if (plateID == null)
{
throw new System.NullReferenceException("plateID must not be null");
}
// Log the call
if (_log.IsDebugEnabled)
{
string msg = "Called " + this + ".FetchPlateInfo(robot=" + robot.ToString() + ", plateID=\"" + plateID + "\")";
_log.Debug(msg);
}
// Special case for ReliabilityTestPlate
if ("ReliabilityTestPlate".Equals(plateID))
{
OPPF.Integrations.ImagerLink.PlateInfo dummy = new OPPF.Integrations.ImagerLink.PlateInfo();
dummy.SetDateDispensed(DateTime.Now);
dummy.SetExperimentName("Dummy Expt Name");
dummy.SetPlateNumber(1);
dummy.SetPlateTypeID("1");
dummy.SetProjectName("Dummy Project Name");
dummy.SetUserEmail("DummyEmailAddress");
dummy.SetUserName("Dummy UserName");
return(dummy);
}
// Declare the return variable
OPPF.Integrations.ImagerLink.PlateInfo pi = null;
try
{
// Create and populate the request object
getPlateInfo request = new getPlateInfo();
request.robot = OPPF.Utilities.Robot2Utils.createProxy(robot);
request.plateID = plateID;
// Make the web service call
WSPlate wsPlate = WSPlateFactory.getWSPlate2();
_log.Info("Calling WSPlate.getPlateInfo()");
getPlateInfoResponse response = wsPlate.getPlateInfo(request);
// Get the webservice proxy PlateInfo
OPPF.Proxies2.PlateInfo ppi = response.getPlateInfoReturn;
// Map it into an IPlateInfo
pi = new OPPF.Integrations.ImagerLink.PlateInfo();
pi.SetDateDispensed(ppi.dateDispensed);
pi.SetExperimentName(ppi.experimentName);
pi.SetPlateNumber(ppi.plateNumber);
// TODO Figure out how to get pims to tell us the right answer
//pi.SetPlateTypeID(ppi.plateTypeID);
pi.SetPlateTypeID(PlateInfoProviderNew.getIDForName(ppi.plateTypeID));
pi.SetProjectName(ppi.projectName);
pi.SetUserEmail(ppi.userEmail);
pi.SetUserName(ppi.userName);
}
catch (Exception e)
{
string msg = "WSPlate.getPlateInfo threw " + e.GetType() + ":\n" + e.Message + "\nfor plate \"" + plateID + "\" in robot \"" + robot.Name + "\"\n - probably not in LIMS - not fatal.";
if (e is System.Web.Services.Protocols.SoapException)
{
System.Web.Services.Protocols.SoapException ee = (System.Web.Services.Protocols.SoapException)e;
msg = msg + "\n\n" + ee.Detail.InnerXml;
}
// Log it
_log.Error(msg, e);
// Don't rethrow - return null - don't want to stop imaging
}
// Return the IPlateInfo
return(pi);
}
/// <summary>
/// Retrieves a dummy plate description.
/// </summary>
/// <param name="robot">The robot to find the plate type for.</param>
/// <param name="plateID">The <c>plateID</c> of the plate.</param>
/// <returns>The <c>IPlateInfo</c> describing the plate.</returns>
public IPlateInfo FetchPlateInfo(IRobot robot, string plateID)
{
// Check arguments - do it up front to avoid possible inconsistencies later
if (robot == null)
{
throw new System.NullReferenceException("robot must not be null");
}
if (plateID == null)
{
throw new System.NullReferenceException("plateID must not be null");
}
// Log the call
if (_log.IsDebugEnabled)
{
string msg = "Called " + this + ".DummyFetchPlateInfo(robot=" + robot.ToString() + ", plateID=\"" + plateID + "\")";
_log.Debug(msg);
}
OPPF.Integrations.ImagerLink.PlateInfo dummy = new OPPF.Integrations.ImagerLink.PlateInfo();
dummy.SetDateDispensed(DateTime.Now);
dummy.SetExperimentName("Dummy Expt for " + plateID);
Regex numberregex = new Regex("^\\d+$");
if (numberregex.IsMatch(plateID))
{
int start = plateID.Length - 8;
if (start < 0)
{
start = 0;
}
dummy.SetPlateNumber(Convert.ToInt32(plateID.Substring(start)));
}
else
{
dummy.SetPlateNumber(1);
}
/*
* platetypeid | strplatetype | intcolumns | introws | intsubpositions | intsubpositionheight | strbarcodepattern | intdefaultscheduleplan
* -------------+--------------------------------------+------------+---------+-----------------+----------------------+-------------------+------------------------
* 1 | Greiner, central shelf only | 12 | 8 | 1 | 2107 | 4413xxxxxxxx | 1
* 2 | OPPF Full Greiner, all three shelves | 12 | 8 | 3 | 2107 | 3313xxxxxxxx | 1
* 3 | Fluidigm 1.96 | 12 | 8 | 1 | 100 | 109xxxxxxx | 2
* 4 | Fluidigm 4.96 | 12 | 8 | 4 | 100 | 110xxxxxxx | 2
* 5 | Fluidigm 8.96 | 12 | 8 | 8 | 100 | 112xxxxxxx | 2
* 6 | Fluidigm DC10 1.96 | 12 | 8 | 1 | 100 | 122xxxxxxx | 2
* 7 | Greiner DC | 12 | 8 | 1 | 2107 | 441310xxxxxx | 1
* 8 | STRUBI Capillary Plates | 12 | 8 | 1 | 100 | 441311xxxxxx | 1
* 9 | Zurich Capillary Plates | 3 | 16 | 19 | 100 | 441312xxxxxx | 2
*/
if (plateID.StartsWith("109"))
{
dummy.SetPlateTypeID("3");
}
else if (plateID.StartsWith("110"))
{
dummy.SetPlateTypeID("4");
}
else if (plateID.StartsWith("112"))
{
dummy.SetPlateTypeID("5");
}
else if (plateID.StartsWith("122"))
{
dummy.SetPlateTypeID("6");
}
else if (plateID.StartsWith("441310"))
{
dummy.SetPlateTypeID("7");
}
else if (plateID.StartsWith("441311"))
{
dummy.SetPlateTypeID("8");
}
else if (plateID.StartsWith("441312"))
{
dummy.SetPlateTypeID("9");
}
else
{
dummy.SetPlateTypeID("1");
}
dummy.SetProjectName("Dummy Project for " + plateID);
dummy.SetUserEmail("DummyEmailAddress");
dummy.SetUserName("Dummy UserName");
// Return the IPlateInfo
return(dummy);
}