public void BuildTexture() //, ParseDNA parseDNA) {
//this.DNA_Model = parseDNA;
{
Debug.Log("inside build texture");
string[] val = DNA_Model.data[key];
string sequence = val[1];
var texture = new Texture2D(textureX, textureY, TextureFormat.BGRA32, true);
GetComponent <Renderer>().material.mainTexture = texture;
texture.SetPixel(textureX, textureY, Color.black); // mark the end of this texture.
Debug.Log("sequence: " + sequence);
for (int i = 0; i < sequence.Length; i++)
{
Nuc n = Nucleotide.CharToNuc(sequence[i]);
texture.SetPixel(i % textureX, i / textureX, Nucleotide.defaultColor[n]);
}
texture.filterMode = FilterMode.Point;
texture.Apply();
}
public void BuildCDSTexture(List <string> cds)
{
Debug.Log("inside build CDS texture");
string sequence1 = cds[0];
string sequence2 = cds[1];
var texture = new Texture2D(textureX, textureY, TextureFormat.BGRA32, true);
GetComponent <Renderer>().material.mainTexture = texture;
//@todo: get new textureX, textureY values from alignment.
texture.SetPixel(textureX, textureY, Color.black); // mark the end of this texture.
Debug.Log("sequence2: " + sequence2);
if (sequence1.Length != sequence2.Length)
{
throw new Exception("two sequences from alignment are not the same length.");
}
for (int i = 0; i < sequence1.Length; i++)
{
Nuc n1 = Nucleotide.CharToNuc(sequence1[i]);
Nuc n2 = Nucleotide.CharToNuc(sequence2[i]);
if (n1 == n2)
{
texture.SetPixel(i % textureX, i / textureX, Nucleotide.litColor[n1]);
}
else
{
texture.SetPixel(i % textureX, i / textureX, Nucleotide.dimColor[n1]);
}
}
texture.filterMode = FilterMode.Point;
texture.Apply();
}
