public ActionResult CopyCitation(MyLibraryModel Model, int specid, string actionFirst, string actionSecond, int oid, int fid, int MID, FormCollection Collection, int start = 1) { if (actionFirst != null) { if (!string.IsNullOrEmpty(Collection["ddlUserSubTopic"])) { var Result = MyLibraryBL.CopyCitation(MID, Collection["ddlUserSubTopic"], CurrentUser.UserId); return(RedirectToAction("index", "mylibrary", new { specid = Result, oid = Collection["SelectedTopic"], fid = Collection["ddlUserSubTopic"], selaction = "saved", start = start })); } else { return(RedirectToAction("abstract", "mylibrary", new { specid = specid, oid = oid, fid = fid, MID = MID })); } } else { if (!string.IsNullOrEmpty(Collection["ddlUserSubTopicSecond"])) { var Result = MyLibraryBL.CopyCitation(MID, Collection["ddlUserSubTopicSecond"], CurrentUser.UserId); return(RedirectToAction("index", "mylibrary", new { specid = Result, oid = Collection["SelectedTopicSecond"], fid = Collection["ddlUserSubTopicSecond"], selaction = "saved", start = start })); } else { return(RedirectToAction("abstract", "mylibrary", new { specid = specid, oid = oid, fid = fid, MID = MID })); } } }
public ActionResult Abstract(int specid = 0, int oid = 0, int fid = 0, string selaction = null, string sort = "date", string searchfolder = "", int MID = 0) { int qsSpecId = specid; MyLibraryModel MainMyLibraryModel = new MyLibraryModel(); var UserSpecialityList = MyLibraryBL.GetUserSpecialities(CurrentUser.UserId); if (qsSpecId == 0) { qsSpecId = UserSpecialityList.Select(n => n.SpecialityId).FirstOrDefault(); } var UserFolderList = MyLibraryBL.GetUserFolderList(qsSpecId, CurrentUser.UserId); MainMyLibraryModel.AllUserFolders = UserFolderList; MainMyLibraryModel.AllUserSpecialities = UserSpecialityList; ViewBag.SpecId = qsSpecId; ViewBag.PrimarySpecialityId = UserSpecialityList.Select(n => n.SpecialityId).FirstOrDefault(); if (MID != 0) { CitationsModel pmid = new CitationsModel(); pmid.pmid = MID; List <CitationsModel> PMIDCitation = new List <CitationsModel>(); PMIDCitation.Add(pmid); MainMyLibraryModel.CitationDetails = MyLibraryBL.GetCitationDetails(PMIDCitation, sort, CurrentUser.UserId, 2, true); MainMyLibraryModel.UserComment = MyLibraryBL.GetUserComment(MID, CurrentUser.UserId); MainMyLibraryModel.AbstractCommentsECList = MyLibraryBL.GetAbstractCommentsEC(MID); } return(View(MainMyLibraryModel)); }
public static bool Annotate(MyLibraryModel Model, int pmid, int UserId) { using (EditorsEntities entity = new EditorsEntities()) { UserComment UpdateComment = (from u in entity.UserComments where u.userid == UserId && u.pmid == pmid select u).FirstOrDefault(); if (UpdateComment == null) { UserComment NewUserComment = new UserComment(); NewUserComment.pmid = pmid; NewUserComment.userid = UserId; NewUserComment.nickname = Model.UserComment.nickname; NewUserComment.comment = Model.UserComment.comment; NewUserComment.updatedate = DateTime.Now; NewUserComment.createdate = DateTime.Now; entity.UserComments.Add(NewUserComment); } else { UpdateComment.userid = UserId; UpdateComment.nickname = Model.UserComment.nickname; UpdateComment.comment = Model.UserComment.comment; UpdateComment.updatedate = DateTime.Now; entity.Entry(UpdateComment).State = EntityState.Modified; } entity.SaveChanges(); return(true); } }
public ActionResult AbstractPrintable(int specid = 0, int oid = 0, int fid = 0, string selaction = null, string sort = "date", string searchfolder = "", int MID = 0) { int qsSpecId = specid; MyLibraryModel MainMyLibraryModel = new MyLibraryModel(); if (MID != 0) { CitationsModel pmid = new CitationsModel(); pmid.pmid = MID; List <CitationsModel> PMIDCitation = new List <CitationsModel>(); PMIDCitation.Add(pmid); MainMyLibraryModel.CitationDetails = MyLibraryBL.GetCitationDetails(PMIDCitation, sort, CurrentUser.UserId, 2, true); MainMyLibraryModel.UserComment = MyLibraryBL.GetUserComment(MID, CurrentUser.UserId); MainMyLibraryModel.AbstractCommentsECList = MyLibraryBL.GetAbstractCommentsEC(MID); } return(View(MainMyLibraryModel)); }
public ActionResult EditLibrary(int specid = 0) { int qsSpecId = specid; MyLibraryModel MainMyLibraryModel = new MyLibraryModel(); var UserSpecialityList = MyLibraryBL.GetUserSpecialities(CurrentUser.UserId); if (qsSpecId == 0) { qsSpecId = UserSpecialityList.Select(n => n.SpecialityId).FirstOrDefault(); } var UserFolderList = MyLibraryBL.GetUserFolderListEdit(qsSpecId, CurrentUser.UserId); MainMyLibraryModel.AllUserFoldersEdit = UserFolderList; MainMyLibraryModel.AllUserSpecialities = UserSpecialityList; MainMyLibraryModel.HiddenTopicIds = MyLibraryBL.GetHiddenTopicIds(CurrentUser.UserId); MainMyLibraryModel.HiddenSubTopicIds = MyLibraryBL.GetHiddenSubTopicIds(CurrentUser.UserId); ViewBag.SpecId = qsSpecId; ViewBag.DefaultSpecId = UserSpecialityList.Select(n => n.SpecialityId).FirstOrDefault(); return(View(MainMyLibraryModel)); }
public ActionResult LinkOut(int PMID = 0, int SpecialityID = 0, int oid = 0, int fid = 0) { int qsSpecId = SpecialityID; MyLibraryModel MainMyLibraryModel = new MyLibraryModel(); var UserSpecialityList = MyLibraryBL.GetUserSpecialities(CurrentUser.UserId); if (qsSpecId == 0) { qsSpecId = UserSpecialityList.Select(n => n.SpecialityId).FirstOrDefault(); } var UserFolderList = MyLibraryBL.GetUserFolderList(qsSpecId, CurrentUser.UserId); MainMyLibraryModel.AllUserFolders = UserFolderList; MainMyLibraryModel.AllUserSpecialities = UserSpecialityList; ViewBag.SpecId = qsSpecId; ViewBag.PrimarySpecialityId = UserSpecialityList.Select(n => n.SpecialityId).FirstOrDefault(); string Query = "http://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?tool=CogentMedicineWebSite&[email protected]&dbfrom=pubmed&id=" + PMID + "&cmd=llinkslib"; EditorsChoicemodel citations = UserBL.DisplayPMIDS(CurrentUser.UserId, PMID.ToString(), 2, 1); citations.SpecialtyID = Convert.ToInt32(SpecialityID); XmlDocument xdoc = new XmlDocument(); xdoc.Load(Query); XDocument doc = XDocument.Load(Query); if (xdoc != null) { XmlNodeList xNodes = xdoc.DocumentElement.GetElementsByTagName("ObjUrl"); List <FullTextLinkOuts> XMLDataList = new List <FullTextLinkOuts>(); List <FullTextLinkOuts> Aggregatorslist = new List <FullTextLinkOuts>(); List <FullTextLinkOuts> ProvList = new List <FullTextLinkOuts>(); string str = string.Empty; foreach (XmlNode dStr in xNodes) { try { FullTextLinkOuts XMLData = new FullTextLinkOuts(); XmlNode SubTypeNode = dStr.SelectSingleNode("SubjectType"); if (SubTypeNode.InnerText.ToLower() == "publishers/providers") { var Description = xdoc.SelectNodes("eLinkResult/LinkSet/IdUrlList/IdUrlSet/ObjUrl/Attribute"); XMLData.ProviderName = ((dStr.LastChild).FirstChild).InnerText; XMLData.URLS = (dStr.FirstChild).InnerText; ProvList.Add(XMLData); } else if (SubTypeNode.InnerText.ToLower() == "aggregators") { string Description = xdoc.SelectSingleNode("eLinkResult/LinkSet/IdUrlList/IdUrlSet/ObjUrl/Attribute").InnerText; XMLData.ProviderName = ((dStr.LastChild).FirstChild).InnerText; XMLData.URLS = (dStr.FirstChild).InnerText; Aggregatorslist.Add(XMLData); } else { str = (dStr.FirstChild).InnerText; if (str.Substring(0, 1) == "/") { str = "http://www.ncbi.nlm.nih.gov" + str; } XMLData.URLS = str; XMLData.ProviderName = ((dStr.LastChild).FirstChild).InnerText; XMLDataList.Add(XMLData); } } catch (Exception) { } } citations.linklist = XMLDataList; citations.ProviderPublis = ProvList; citations.Aggregator = Aggregatorslist; } citations.SpecialtyID = Convert.ToInt32(SpecialityID); citations.PMID = Convert.ToInt32(PMID); MainMyLibraryModel.LinkoutModelVar = citations; return(View(MainMyLibraryModel)); }
public ActionResult Annotate(MyLibraryModel Model, int specid, int pmid, int oid, int fid, string selaction) { var Result = MyLibraryBL.Annotate(Model, pmid, CurrentUser.UserId); return(RedirectToAction("abstract", "mylibrary", new { specid = specid, oid = oid, fid = fid, MID = pmid, selaction = selaction })); }
// // GET: /mylibrary/ public ActionResult Index(int specid = 0, int oid = 0, int fid = 0, string selaction = null, string sort = "date", string searchfolder = "", string page = "", int start = 1) { int qsSpecId = specid; MyLibraryModel MainMyLibraryModel = new MyLibraryModel(); var UserSpecialityList = MyLibraryBL.GetUserSpecialities(CurrentUser.UserId); if (qsSpecId == 0) { qsSpecId = UserSpecialityList.Select(n => n.SpecialityId).FirstOrDefault(); } var UserFolderList = MyLibraryBL.GetUserFolderList(qsSpecId, CurrentUser.UserId); MainMyLibraryModel.AllUserFolders = UserFolderList; MainMyLibraryModel.AllUserSpecialities = UserSpecialityList; ViewBag.SpecId = qsSpecId; ViewBag.PrimarySpecialityId = UserSpecialityList.Select(n => n.SpecialityId).FirstOrDefault(); // For Citation if (selaction == "saved") { MainMyLibraryModel.Citations = MyLibraryBL.GetCitations(fid, CurrentUser.UserId); if (MainMyLibraryModel.Citations.Count > 0) { MainMyLibraryModel.CitationDetails = MyLibraryBL.GetCitationDetails(MainMyLibraryModel.Citations, sort, CurrentUser.UserId, 2); } else { MainMyLibraryModel.CitationDetails = null; } } else if (selaction == "editor") { MainMyLibraryModel.PMIDs = MyLibraryBL.GetEditorsChoicePMids(fid); MainMyLibraryModel.Citations = MyLibraryBL.GetEditorsChoiceCitations(fid, CurrentUser.UserId); if (MainMyLibraryModel.Citations.Count > 0) { MainMyLibraryModel.CitationDetails = MyLibraryBL.GetCitationDetails(MainMyLibraryModel.Citations, sort, CurrentUser.UserId, 2); } else { MainMyLibraryModel.CitationDetails = null; } } else if (selaction == "seminal") { MainMyLibraryModel.PMIDs = MyLibraryBL.GetSeminalPMids(fid); MainMyLibraryModel.Citations = MyLibraryBL.GetSeminalCitations(fid, CurrentUser.UserId); if (MainMyLibraryModel.Citations.Count > 0) { MainMyLibraryModel.CitationDetails = MyLibraryBL.GetCitationDetails(MainMyLibraryModel.Citations, sort, CurrentUser.UserId, 2); } else { MainMyLibraryModel.CitationDetails = null; } } else if (selaction == "sponsor") { MainMyLibraryModel.PMIDs = MyLibraryBL.GetSponsorPMids(fid); MainMyLibraryModel.Citations = MyLibraryBL.GetSponsorCitations(fid, CurrentUser.UserId); if (MainMyLibraryModel.Citations.Count > 0) { MainMyLibraryModel.CitationDetails = MyLibraryBL.GetCitationDetails(MainMyLibraryModel.Citations, sort, CurrentUser.UserId, 2); } else { MainMyLibraryModel.CitationDetails = null; } } else if (selaction == "acr") { MainMyLibraryModel.AcrDocumentsMyLibraryList = MyLibraryBL.getAcrDocumentsList(fid); } if (!string.IsNullOrEmpty(searchfolder)) { MainMyLibraryModel.CitationDetails = MainMyLibraryModel.CitationDetails.Where(c => c.pmid.ToString() == searchfolder || (c.AuthorList ?? "").Contains(searchfolder) || (c.ArticleTitle ?? "").Contains(searchfolder) || (c.MedlinePgn ?? "").Contains(searchfolder) || (c.MedlineTA ?? "").Contains(searchfolder)).ToList(); } if (MainMyLibraryModel.CitationDetails != null) { MainMyLibraryModel.CitationDetailsTotal = MainMyLibraryModel.CitationDetails; MainMyLibraryModel.CitationDetails = MainMyLibraryModel.CitationDetailsTotal.Skip(start - 1).Take(25).ToList(); using (Cogent3Entities entity = new Cogent3Entities()) { foreach (var item in MainMyLibraryModel.CitationDetails) { if ((!item.unicodeFixed.HasValue) || (item.unicodeFixed == false)) { if ((item.ArticleTitle ?? "").Contains("?") || (item.ArticleTitle ?? "").Contains("=")) { List <string> ArticleTitleWithNoIssue = MyLibraryBL.GetAbstractWithNoIssue(item.pmid); if (ArticleTitleWithNoIssue.Count == 2) { item.ArticleTitle = ArticleTitleWithNoIssue[1]; int PMID = Convert.ToInt32(item.pmid); var IwideTable = (from iw in entity.iWides where iw.PMID == item.pmid select iw).FirstOrDefault(); if (IwideTable != null) { //AbstractArticleTitleNew[0] is for Abstract Text and AbstractArticleTitleNew[1] is for Article Title;; item.ArticleTitle = ArticleTitleWithNoIssue[1]; IwideTable.ArticleTitle = ArticleTitleWithNoIssue[1]; entity.Entry(IwideTable).State = EntityState.Modified; } var IwideNewTable = (from iw in entity.iWideNews where iw.PMID == item.pmid select iw).FirstOrDefault(); if (IwideNewTable != null) { item.ArticleTitle = ArticleTitleWithNoIssue[1]; IwideNewTable.ArticleTitle = ArticleTitleWithNoIssue[1]; entity.Entry(IwideNewTable).State = EntityState.Modified; } } } } } entity.SaveChanges(); } } return(View(MainMyLibraryModel)); }