public static IBreastCancerSampleInfoParser2 GetParserInDirectory(string directory) { var dirname = Path.GetFileName(directory); //if (!dirname.StartsWith("GSE")) //{ // return new EBIDatasetParser(); //} CompositeParser2 parser = new CompositeParser2(); var fixedParser = GetParser(dirname); if (fixedParser != null) { parser.Add(fixedParser); } var siformat = Directory.GetFiles(directory, "*.siformat"); if (siformat.Length > 0) { var siParser = new PropertyMappingParser(siformat[0]); parser.Add(siParser); } if (parser.Count == 0) { throw new Exception("I don't know how to parse the information of " + dirname); } if (parser.Count == 1) { return parser[0]; } return parser; }
public static IBreastCancerSampleInfoParser2 GetParserInDirectory(string directory) { var dirname = Path.GetFileName(directory); //if (!dirname.StartsWith("GSE")) //{ // return new EBIDatasetParser(); //} CompositeParser2 parser = new CompositeParser2(); var fixedParser = GetParser(dirname); if (fixedParser != null) { parser.Add(fixedParser); } var siformat = Directory.GetFiles(directory, "*.siformat"); if (siformat.Length > 0) { var siParser = new PropertyMappingParser(siformat[0]); parser.Add(siParser); } if (parser.Count == 0) { throw new Exception("I don't know how to parse the information of " + dirname); } if (parser.Count == 1) { return(parser[0]); } return(parser); }