/// <summary>
/// Imports all Events of the SBML Model.
/// </summary>
protected override void Import(Model model)
{
_astHandler.NeedAbsolutePath = true;
CreateEGBandEGBB();
for (long i = 0; i < model.getNumEvents(); i++)
{
CreateEvent(model.getEvent(i));
}
_astHandler.NeedAbsolutePath = false;
AddToProject();
}
/// <summary>
/// Imports all Events of the SBML Model.
/// </summary>
protected override void Import(Model model)
{
_astHandler.NeedAbsolutePath = true;
CreateEGBandEGBB();
var numEvents = model.getNumEvents();
if (numEvents == 0)
{
CreateEmptyEvent();
}
else
{
for (var i = 0; i < numEvents; i++)
{
CreateEvent(model.getEvent(i));
}
}
_astHandler.NeedAbsolutePath = false;
AddToProject();
}
private static void printMath(Model m)
{
int n;
for (n = 0; n < m.getNumFunctionDefinitions(); ++n)
{
printFunctionDefinition(n + 1, m.getFunctionDefinition(n));
}
for (n = 0; n < m.getNumRules(); ++n)
{
printRuleMath(n + 1, m.getRule(n));
}
Console.WriteLine();
for (n = 0; n < m.getNumReactions(); ++n)
{
printReactionMath(n + 1, m.getReaction(n));
}
Console.WriteLine();
for (n = 0; n < m.getNumEvents(); ++n)
{
printEventMath(n + 1, m.getEvent(n));
}
}
public void test_Model_createEvent()
{
Model m = new Model(2,2);
Event p = m.createEvent();
assertTrue( m.getNumEvents() == 1 );
assertTrue( (p).getLevel() == 2 );
assertTrue( (p).getVersion() == 2 );
m = null;
}
public void test_Model_addEvent4()
{
Model m = new Model(2,2);
Event e = new Event(2,2);
Trigger t = new Trigger(2,2);
t.setMath(libsbml.parseFormula("true"));
e.setId( "e");
e.setTrigger(t);
e.createEventAssignment();
Event e1 = new Event(2,2);
e1.setId( "e");
e1.setTrigger(t);
e1.createEventAssignment();
int i = m.addEvent(e);
assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS );
assertTrue( m.getNumEvents() == 1 );
i = m.addEvent(e1);
assertTrue( i == libsbml.LIBSBML_DUPLICATE_OBJECT_ID );
assertTrue( m.getNumEvents() == 1 );
e = null;
e1 = null;
m = null;
}
public void test_Model_addEvent3()
{
Model m = new Model(2,2);
Event e = null;
int i = m.addEvent(e);
assertTrue( i == libsbml.LIBSBML_OPERATION_FAILED );
assertTrue( m.getNumEvents() == 0 );
m = null;
}
public void test_Model_addEvent2()
{
Model m = new Model(2,2);
Event e = new Event(2,1);
Trigger t = new Trigger(2,1);
t.setMath(libsbml.parseFormula("true"));
e.setTrigger(t);
e.createEventAssignment();
int i = m.addEvent(e);
assertTrue( i == libsbml.LIBSBML_VERSION_MISMATCH );
assertTrue( m.getNumEvents() == 0 );
e = null;
m = null;
}
public void test_ReadSBML_Event_trigger()
{
Event e;
Trigger trigger;
string formula;
string s = wrapSBML_L2v1("<listOfEvents>" +
" <event>" +
" <trigger>" +
" <math>" +
" <apply>" +
" <leq/>" +
" <ci> P1 </ci>" +
" <ci> t </ci>" +
" </apply>" +
" </math>" +
" </trigger>" +
" </event>" +
"</listOfEvents>");
D = libsbml.readSBMLFromString(s);
M = D.getModel();
assertTrue( M.getNumEvents() == 1 );
e = M.getEvent(0);
assertTrue( e != null );
assertEquals( false, e.isSetDelay() );
assertEquals( true, e.isSetTrigger() );
trigger = e.getTrigger();
formula = libsbml.formulaToString(trigger.getMath());
assertTrue( formula != null );
assertTrue(( "leq(P1, t)" == formula ));
}
public void test_ReadSBML_Event_delay()
{
Event e;
Delay delay;
string formula;
string s = wrapSBML_L2v1("<listOfEvents>" +
" <event> <delay> <math> <cn> 5 </cn> </math> </delay> </event>" +
"</listOfEvents>");
D = libsbml.readSBMLFromString(s);
M = D.getModel();
assertTrue( M.getNumEvents() == 1 );
e = M.getEvent(0);
assertTrue( e != null );
assertEquals( true, e.isSetDelay() );
assertEquals( false, e.isSetTrigger() );
delay = e.getDelay();
formula = libsbml.formulaToString(delay.getMath());
assertTrue( formula != null );
assertTrue(( "5" == formula ));
}
public void test_ReadSBML_EventAssignment()
{
Event e;
EventAssignment ea;
ASTNode math;
string formula;
string s = wrapSBML_L2v1("<listOfEvents>" +
" <event>" +
" <listOfEventAssignments>" +
" <eventAssignment variable='k2'>" +
" <math> <cn> 0 </cn> </math>" +
" </eventAssignment>" +
" </listOfEventAssignments>" +
" </event>" +
"</listOfEvents>");
D = libsbml.readSBMLFromString(s);
M = D.getModel();
assertTrue( M.getNumEvents() == 1 );
e = M.getEvent(0);
assertTrue( e != null );
assertTrue( e.getNumEventAssignments() == 1 );
ea = e.getEventAssignment(0);
assertTrue( ea != null );
assertEquals( true, ea.isSetVariable() );
assertTrue(( "k2" == ea.getVariable() ));
assertEquals( true, ea.isSetMath() );
math = ea.getMath();
formula = libsbml.formulaToString(math);
assertTrue( formula != null );
assertTrue(( "0" == formula ));
}
public void test_ReadSBML_Event()
{
Event e;
string s = wrapSBML_L2v2("<listOfEvents>" +
" <event id='e1' name='MyEvent' timeUnits='time'/>" +
"</listOfEvents>");
D = libsbml.readSBMLFromString(s);
M = D.getModel();
assertTrue( M.getNumEvents() == 1 );
e = M.getEvent(0);
assertTrue( e != null );
assertEquals( true, e.isSetId() );
assertEquals( true, e.isSetName() );
assertEquals( true, e.isSetTimeUnits() );
assertEquals( false, e.isSetTrigger() );
assertEquals( false, e.isSetDelay() );
assertTrue(( "e1" == e.getId() ));
assertTrue(( "MyEvent" == e.getName() ));
assertTrue(( "time" == e.getTimeUnits() ));
}
public void test_Model_addEvent1()
{
Model m = new Model(2,2);
Event e = new Event(2,2);
Trigger t = new Trigger(2,2);
int i = m.addEvent(e);
assertTrue( i == libsbml.LIBSBML_INVALID_OBJECT );
e.setTrigger(t);
i = m.addEvent(e);
assertTrue( i == libsbml.LIBSBML_INVALID_OBJECT );
e.createEventAssignment();
i = m.addEvent(e);
assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS );
assertTrue( m.getNumEvents() == 1 );
e = null;
m = null;
}