public int SetUMCS(string file_path, clsUMC [] umcs) { try { var index = file_path.LastIndexOf("\\", StringComparison.Ordinal); var file = file_path.Substring(index + 1); marr_file_names.Add(file); mhash_umc_2_dataset_num [file] = mint_num_datasets; marr_dataset_start_index.Add(mint_num_umcs); if (marr_umcs.Length < mint_num_umcs + umcs.Length) { var temp = new clsUMC[2 * marr_umcs.Length]; for (var i = 0; i < mint_num_umcs; i++) { temp[i] = marr_umcs[i]; } marr_umcs = temp; } var num_to_add = umcs.Length; var min_scan = int.MaxValue; var max_scan = int.MinValue; for (var i = 0; i < num_to_add; i++) { marr_umcs[i + mint_num_umcs] = umcs[i]; if (umcs[i].mint_scan < min_scan) { min_scan = umcs[i].mint_scan; } if (umcs[i].mint_scan > max_scan) { max_scan = umcs[i].mint_scan; } } mint_num_umcs += num_to_add; marr_dataset_stop_index.Add(mint_num_umcs); marr_dataset_min_scan.Add(min_scan); marr_dataset_max_scan.Add(max_scan); } catch (Exception ex) { Console.WriteLine(ex.Message + ex.StackTrace); } mint_num_datasets++; return(mint_num_datasets - 1); }
public clsUMC[] GetUMCS(int dataset_num) { int start_index = 0, stop_index = 0; GetDataIndex(dataset_num, ref start_index, ref stop_index); var num_pts = stop_index - start_index; var umc_arr = new clsUMC[num_pts]; try { int index; for (index = start_index; index < stop_index; index++) { umc_arr[index - start_index] = marr_umcs[index]; } } catch (Exception e) { Console.WriteLine(e.Message + e.StackTrace); } return(umc_arr); }
public clsUMC[] GetUMCs() { var numUmcs = mobj_umc_creator.GetNumUmcs(); var arr_umcs = new clsUMC[numUmcs]; for (var umcNum = 0; umcNum < numUmcs; umcNum++) { var umc = mobj_umc_creator.mvect_umcs[umcNum]; var newUmc = new clsUMC { mdbl_abundance = umc.mdbl_sum_abundance, mdbl_class_rep_mz = umc.mdbl_class_rep_mz, mdbl_mono_mass = umc.mdbl_median_mono_mass }; newUmc.mdbl_mono_mass_calibrated = newUmc.mdbl_mono_mass; newUmc.mint_scan = umc.mint_max_abundance_scan; newUmc.mint_start_scan = umc.mint_start_scan; newUmc.mint_end_scan = umc.mint_stop_scan; newUmc.mdbl_net = umc.mint_max_abundance_scan; if (mobj_umc_creator.mint_lc_max_scan > mobj_umc_creator.mint_lc_min_scan) { // Compute Generic NET value newUmc.mdbl_net = (umc.mint_max_abundance_scan - mobj_umc_creator.mint_lc_min_scan) * 1.0 / (mobj_umc_creator.mint_lc_max_scan - mobj_umc_creator.mint_lc_min_scan); } newUmc.mint_scan_aligned = umc.mint_max_abundance_scan; newUmc.mint_umc_index = umc.mint_umc_index; newUmc.mint_class_rep_charge = umc.mshort_class_rep_charge; arr_umcs[umcNum] = newUmc; } return(arr_umcs); }