public override string ToString()
{
string result = "|";
Genes.ForEach(x => result += x.ToString() + "|");
return(result);
}
public override IGenotype ShallowCopy()
{
return(new CollectiveGenotype <T>(Genes.Length)
{
Genes = Genes.Clone() as byte[]
});
}
protected virtual void setGenes(Genes newGenes)
{
genes = newGenes;
material.color = (genes.isMale) ? maleColour : femaleColour;
moveSpeed = genes.speed;
adultSize = genes.size;
}
public BitChromosome(int length, Genes.BitGeneFactory bitGeneFactory)
{
this.length = length;
this.bits = new Genes.BitGene[this.length];
for (int i = 0; i < this.length; ++i)
this.bits[i] = (Genes.BitGene)bitGeneFactory.GetNewGene();
}
void Awake()
{
Globals.Player = gameObject;
genes = new Genes();
genes.isPlant = false;
genes.size = 1.0f;
genes.swCircle = 0;
genes.swSquare = 0;
genes.swStar = 0.5f;
genes.swRose = 0;
genes.swRose2 = 0;
genes.swCardioid = 0.5f;
genes.playerFollowStrength = 0;
genes.bubbleInterval = 1e9f;
genes.playerHealthRestoreBase = 0;
genes.species = 0;
//genes.UpdateColor();
genes.color = Color.blue;
transform.FindChild("Blob").gameObject.GetComponent <BlobShape>().Genes = genes;
}
public override IGenotype ShallowCopy()
{
return(new Int32Genotype(sizeof(int))
{
Genes = Genes.Clone() as byte[],
});
}
private void Awake()
{
vitalFunctions = GetComponent <VitalFunctions>();
genes = GetComponent <Genes>();
perceptor = GetComponentInChildren <Perceptor>();
communicator = GetComponentInChildren <BehaviourCommunicator>();
}
public override IGenotype ShallowCopy()
{
return(new UInt16Genotype(sizeof(ushort))
{
Genes = Genes.Clone() as byte[]
});
}
public void Register(Genes genes)
{
foreach (Entry x in species)
{
float d = genes.Difference(x.genes);
if (d < cSpeciesOffset)
{
// found it!
x.count++;
x.maxCount++;
genes.species = x.id;
genes.isFounder = false;
return;
}
}
// a new species, hurray!
Entry y = new Entry();
y.id = speciesId++;
y.genes = genes.Clone(); // can we have a clone plz?
y.count = 1;
genes.species = y.id;
genes.isFounder = true;
species.Add(y);
}
public Genes CrossGenes(Genes other, Genes out_)
{
//crosses all genes on object and puts result into out_
List <Gene> newGenes = new List <Gene>();
foreach (Gene gene in genes)
{
try
{
Gene matching = other.GetGene(gene.name);
newGenes.Add(gene.CrossGene(matching, gene.name));
}
catch (ArgumentException e)
{
print(e);
Debug.LogWarning(String.Format("'{0}' Could not find a matching gene for '{1}' in '{2}', skipping...", name, gene.name, other.gameObject.name), gameObject);
}
}
out_.genes.Clear();
foreach (Gene gene in newGenes)
{
out_.SetGene(gene);
}
return(out_);
}
public Genes Clone()
{
Genes g = new Genes();
g.isPlant = this.isPlant;
g.size = this.size;
g.swCircle = this.swCircle;
g.swSquare = this.swSquare;
g.swStar = this.swStar;
g.swStarCount = this.swStarCount;
g.swStarPower = this.swStarPower;
g.swStarRadiusMin = this.swStarRadiusMin;
g.swRose = this.swRose;
g.swRosePetals = this.swRosePetals;
g.swRose2 = this.swRose2;
g.swRoseAbsPetals = this.swRoseAbsPetals;
g.swCardioid = this.swCardioid;
g.playerFollowStrength = this.playerFollowStrength;
g.bubbleInterval = this.bubbleInterval;
g.playerHealthRestoreBase = this.playerHealthRestoreBase;
g.reproductionIntervalBase = this.reproductionIntervalBase;
g.color = this.color;
g.species = this.species;
g.isFounder = this.isFounder;
return(g);
}
public float Difference(Genes other)
{
if (isPlant != other.isPlant)
{
return(1.0f);
}
float d =
D(size, other.size, 1.0f)
+ D(swCircle, other.swCircle, 1.0f)
+ D(swSquare, other.swSquare, 1.0f)
+ D(swStar, other.swStar, 1.0f)
+ D(swStarCount, other.swStarCount, 1.0f)
+ D(swStarPower, other.swStarPower, 1.0f)
+ D(swStarRadiusMin, other.swStarRadiusMin, 1.0f)
+ D(swRose, other.swRose, 1.0f)
+ D(swRosePetals, other.swRosePetals, 1.0f)
+ D(swRose2, other.swRose2, 1.0f)
+ D(swRoseAbsPetals, other.swRoseAbsPetals, 1.0f)
+ D(swCardioid, other.swCardioid, 1.0f)
+ D(playerFollowStrength, other.playerFollowStrength, 3.0f)
+ D(bubbleInterval, other.bubbleInterval, 3.0f)
+ D(playerHealthRestoreBase, other.playerHealthRestoreBase, 3.0f);
return(Mathf.Sqrt(d / 10.0f));
}
public GameObject SpawnFromPool(string tag, Vector3 pos, Genes father, Genes mother)
{
if (!poolDict.ContainsKey(tag))
{
Debug.LogWarning("Pool doesnt have this tag");
return(null);
}
var obj = poolDict[tag].Dequeue();
obj.SetActive(true);
var obj_agent = obj.GetComponent <Agent>();
var obj_life = obj.GetComponent <LifeComponent>();
var obj_vision = obj.GetComponent <VisionComponent>();
obj_agent.ResetAgent(true, father, mother);
obj_life.ResetLifeStatus();
obj_vision.ResetVision();
obj.transform.position = pos;
if (tag == "rabbit")
{
World.instance.actualRabbitAmount++;
}
if (tag == "wolf")
{
World.instance.actualWolfAmount++;
}
World.instance.UpdateUI();
return(obj);
}
public override void Init(Coord coord)
{
base.Init(coord);
moveFromCoord = coord;
genes = Genes.RandomGenes(1);
material.color = (genes.isMale) ? maleColour : femaleColour;
switch (Specimen)
{
case Specimen.Undefined:
mySleepBehaviour = SleepBehaviour.None;
break;
case Specimen.Plant:
mySleepBehaviour = SleepBehaviour.None;
break;
case Specimen.Rabbit:
mySleepBehaviour = SleepBehaviour.Crepuscular;
break;
case Specimen.Fox:
mySleepBehaviour = SleepBehaviour.Nocturnal;
break;
default:
Debug.LogWarning("Specimen is undefined");
break;
}
ChooseNextAction();
}
protected override void OnEnd()
{
GameObject target = this.GetComponent <Species>().targetObject;
if (target != null && target.GetComponent <Mate>() != null)
{
Mate m = target.GetComponent <Mate>();
if (m.GetComponent <Animator>().GetInteger(mateTimeProperty) > 0)
{
//Mate not suitable.
this.GetComponent <Animator>().SetInteger(mateTimeProperty, Random.Range(1000, 2500));
}
else
{
if (this.gameObject.GetInstanceID() > target.GetInstanceID()) //I WILL BEAR THIS CHILD
{
GameObject child = Instantiate(this.gameObject);
child.transform.position = this.transform.position;
child.transform.SetParent(this.transform.parent);
Genes mg = this.GetComponent <Genes>();
Genes og = target.GetComponent <Genes>();
Genes cg = child.GetComponent <Genes>();
mg.MutateTo(og, cg);
}
this.GetComponent <Species>().targetObject = null;
this.GetComponent <Animator>().SetInteger(mateTimeProperty, Random.Range(1000, 5000));
this.GetComponent <Animator>().SetBool(mateFoundProperty, false);
}
}
}
public ByteChromosome(int length, Genes.ByteGeneFactory byteFactory)
{
this.length = length;
this.bytes = new Genes.ByteGene[this.length];
for (int i = 0; i < this.length; ++i)
this.bytes[i] = (Genes.ByteGene)byteFactory.GetNewGene();
}
// Start is called before the first frame update
void Start()
{
if (readGenesOnStart)
{
Genes genes = GetComponent <Genes>();
if (genes != null)
{
try
{
ColorUtility.TryParseHtmlString(genes.GetValue <string>("earlyColor"), out earlyColor);
ColorUtility.TryParseHtmlString(genes.GetValue <string>("optimumColor"), out optimumColor);
ColorUtility.TryParseHtmlString(genes.GetValue <string>("lateColor"), out lateColor);
healthToColorRatio = genes.GetValue <float>("healthToColorRatio");
}
catch (Exception e)
{
print(e);
Debug.LogWarning("A gene could not be read, some variables may be using default values!", gameObject);
}
}
else
{
Debug.LogWarning(String.Format("A gene script was not given to '{0}', using default values!", name), gameObject);
}
}
}
//Give birth to two children
public Genome(Genome Father, Genome Mother, bool XY, Int64 id)
{
ID = id;
this.Genes = new List <String>();
//Get half the length
int HalfLength = (int)Math.Round((Father.Genes.Count / 2D), 0);
//If XY is true then spawn first three of father and last three of mother otherwise do the opposite
if (XY)
{
//Father
for (int i = 0; i < HalfLength; i++)
{
Genes.Add(Father.Genes[i]);
}
//Mother
for (int i = HalfLength; i < Mother.Genes.Count; i++)
{
Genes.Add(Mother.Genes[i]);
}
}
else
{
//Mother
for (int i = 0; i < HalfLength; i++)
{
Genes.Add(Mother.Genes[i]);
}
//Father
for (int i = HalfLength; i < Father.Genes.Count; i++)
{
Genes.Add(Father.Genes[i]);
}
}
}
void Start()
{
estado = GetComponent <Estado> ();
caminar = GetComponent <Caminar> ();
genes = GetComponent <Genes> ();
ObjetivoPuntoAleatorio = false;
}
// Start is called before the first frame update
void Start()
{
//reading gene script for variable values
if (readGenesOnStart)
{
Genes genes = GetComponent <Genes>();
if (genes != null)
{
try
{
expectedLifetime = genes.GetValue <int>("expectedLifetime");
deathTimeSkew = genes.GetValue <float>("deathTimeSkew");
}
catch (Exception e)
{
print(e);
Debug.LogWarning("A gene could not be read, some variables may be using default values!", gameObject);
}
}
else
{
Debug.LogWarning(String.Format("A gene script was not given to '{0}', using default values!", name), gameObject);
}
BalanceFloats(allDependencies, 0, maxEfficiency);
}
timeAliveLeft = expectedLifetime;
}
/// <summary>
/// Adds gene between two nodes.
/// There cannot be two genes between same nodes.
/// </summary>
private void AddGene(Random rnd, ref int innovation, List <Gene> allGenes)
{
int latter;
int first;
do
{
first = rnd.Next(0, Nodes.Count);
}while(Nodes[first].Type == NodeType.Output);
Node input = Nodes[first];
Node output;
int j = 0;
do
{
latter = rnd.Next(0, Nodes.Count);
output = Nodes[latter];
++j;
if (j > 10 && input.Layer >= output.Layer)
{
for (int i = 0; i < Nodes.Count; i++)
{
if (input.Layer < Nodes[i].Layer)
{
output = Nodes[i];
}
}
}
} // SHOULD NOT PICK THE SAME LAYER
while (input.Layer >= output.Layer);
Gene gene = null;
foreach (var item in allGenes)
{
if (item.In.Number == input.Number && item.Out.Number == output.Number)
{
gene = item.ShallowCopy();
gene.In = input;
gene.Type = GeneType.Enabled;
gene.Out = output;
break;
}
}
if (gene == null)
{
gene = new Gene(input, output, 0f, GeneType.Enabled, ++innovation);
var g = gene.ShallowCopy();
g.Type = GeneType.AddGene;
allGenes.Add(g);
}
if (Genes.ContainsValue(gene))
{
return;
}
gene.Weight = gene.AssignRandomWeight(rnd);
gene.In.OutgoingConnections.Add(gene);
Genes.Add(gene.Innovation, gene);
}
public void Render(GameObject objeto)
{
//Mostrar el nombre del individuo
textoNombre.text = objeto.name;
// Mostrar los genes del individuo
Genes genes = objeto.GetComponent <Genes>();
string genCode = "";
foreach (int n in genes.getGenes())
{
genCode += n.ToString();
}
textoGenes.text = "Genes: " + genCode;
textoFuerza.text = "Fuerza: " + genes.fuerza;
textoVelocidad.text = "Velocidad: " + genes.velocidad;
textoTve.text = "Tiempo vida\nestmado: " + genes.getLongevidad() + " segundos";
// Mostrar color del individuo
imagenColor.color = genes.col;
//Asignar genes al sample 3D
sampleGenes.SetGenes(genes.getGenes());
//Mostrar informacion del estado del individuo
Estado estado = objeto.GetComponent <Estado>();
textoHambre.text = "Hambre: " + estado.hambre;
textoEnergia.text = "Energía: " + estado.energia;
textoSalud.text = "Salud: " + estado.salud;
sampleGenes.decodeGenes(); // se pone al final para evitar errores con el decofigicador de genes
}
public void InheritGenes(Genes mother, Genes father)
{
randomGenes(speed, mother.speed, father.speed);
randomGenes(visonDistance, mother.visonDistance, father.visonDistance);
randomGenes(visonDistance, mother.visonDistance, father.visonDistance);
randomGenes(strength, mother.strength, father.strength);
randomGenesLow(criticalPercent, mother.criticalPercent, father.criticalPercent);
randomGenesInt(offSpringAmount, mother.offSpringAmount, father.offSpringAmount);
if (strength <= 0)
{
strength = 1;
}
if (speed <= 0)
{
speed = 1;
}
if (visonDistance <= 2)
{
visonDistance = 2;
}
if (reperductiveUrge <= 0)
{
reperductiveUrge = 0.01f;
}
if (offSpringAmount <= 0)
{
offSpringAmount = 1;
}
}
void Atacar(Pelear yo, Collider otro)
{
Genes genOtro = otro.GetComponent <Genes> ();
if (genes == null || genOtro == null)
{
return;
}
int sim = Utils.similitudGenetica(yo.genes, genOtro);
if (sim < 70)
{
//Atacar!!!
//print("soy " + yo.name + " y estoy atacando a " + otro.name);
Estado estadoEnemigo = otro.GetComponent <Estado> ();
Debug.DrawLine(yo.transform.position + Vector3.up, otro.transform.position + Vector3.up, genes.col, 1f);
// decrementar la salud enemiga
estadoEnemigo.salud -= ((20 / 8) * genes.fuerza); // la fuerza maxima es 8, por lo tanto se divide 20(maximo de ataque) entre 8 y se multiplica por su propia fuerza
targetEnemigo = estadoEnemigo.gameObject;
laser.SetPosition(0, transform.position);
laser.SetPosition(1, otro.transform.position);
laser.enabled = true;
yo.atacar = false;
yo.StartCoroutine(yo.reAtacar());
}
}
// Start is called before the first frame update
void Start()
{
//reading gene script for variable values
if (readGenesOnStart)
{
Genes genes = GetComponent <Genes>();
if (genes != null)
{
try
{
dependencyAmount = genes.GetValue <float>("dependencyAmount");
minValue = genes.GetValue <int>("minValue");
maxValue = genes.GetValue <int>("maxValue");
optimumPercentage = genes.GetValue <float>("optimumPercentage");
}
catch (Exception e)
{
print(e.ToString());
Debug.LogWarning("A gene could not be read, some variables may be using default values!", gameObject);
}
}
else
{
Debug.LogWarning(String.Format("A gene script was not given to '{0}', using default values!", name), gameObject);
}
}
depAmountChanged = false;
prevDepAmount = dependencyAmount;
}
private void ObtenerEstadisticas()
{
//Obtener todos los individuos;
individuos = GameObject.FindGameObjectsWithTag("Individuo");
Dictionary <string, int> razas = new Dictionary <string, int>();
foreach (GameObject g in individuos)
{
//Obtener codigo de familia
Genes genes = g.GetComponent <Genes>();
string codigoFam = genes.familia;
if (!razas.ContainsKey(codigoFam))
{
razas.Add(codigoFam, 1);
}
else
{
razas [codigoFam]++;
}
CalcularMejorAdaptado(g);
}
RazasVivas = razas.Count;
IndividuosVivos = individuos.Length;
// imprimir estadisticas
text.text = "";
text.text += ("Razas vivas: " + RazasVivas) + "\n";
text.text += ("Individuos nacidos: " + individuosNacidos) + "\n";
text.text += ("Individuos Muertos: " + individuosMuertos) + "\n";
text.text += ("Mutaciones Generadas: " + mutaciones);
}
public override IGenotype ShallowCopy()
{
return(new UInt64Genotype(sizeof(ulong))
{
Genes = Genes.Clone() as byte[],
});
}
public List <Gene <T> > GetElites(int elitismOverride = 0)
{
List <Gene <T> > elites = new List <Gene <T> >();
if (Genes.Count < 1)
{
return(elites);
}
if (elitismOverride != 0)
{
elites.Capacity = elitismOverride;
}
else
{
elites.Capacity = settings.elitism;
}
FitnessScaling <T> .ScaleFitness(Genes, settings.scalingType);
Genes.Sort();
Elite = new Gene <T>(Genes[0]);
for (int i = 0; i < elites.Capacity && i < Genes.Count; i++)
{
elites.Add(new Gene <T>(Genes[i]));
}
return(elites);
}
private double GetDecodedValue()
{
return(Genes
.Reverse()
.Select((x, i) => (x ? Math.Pow(2, i) : 0))
.Sum());
}
void debug_cross_over()
{
Genes[] second_gen = new Genes[evolution_settings.maximumNumberOfBrushStrokes * evolution_settings.populationPoolNumber];
compute_resources.second_gen_population_pool_buffer.GetData(second_gen);
population_member_to_string(second_gen);
}
public IGenome Copy()
{
Dictionary <Guid, INode> nodeReplacements = new Dictionary <Guid, INode>();
List <IGene> genes = Genes.Select(g => g.Copy()).ToList();
genes.ToList().ForEach(g =>
{
if (!nodeReplacements.Any(nr => nr.Key == g.NodeIn.Id))
{
nodeReplacements.Add(g.NodeIn.Id, g.NodeIn.Copy());
}
if (!nodeReplacements.Any(nr => nr.Key == g.NodeOut.Id))
{
nodeReplacements.Add(g.NodeOut.Id, g.NodeOut.Copy());
}
g.NodeIn = nodeReplacements[g.NodeIn.Id];
g.NodeOut = nodeReplacements[g.NodeOut.Id];
});
return(new Genome()
{
Id = Id,
Genes = genes,
Nodes = nodeReplacements.Select(nr => nr.Value).ToList()
});
}
// 새로운 노드를 추가함.
// 기존의 연결 중 무작위로 선택해서 기존의 연결은 비활성화시키고,
// 그 사이에 새로운 노드를 추가함.
// in ==(w₁)==> out 이었다면
// in =(w₂)=> new =(w₃)=> out과 같이 변이가 일어남. (w₁w₂w₃는 연결의 가중치)
// 이때 구조적 혁신이 기존 성능에 주는 영향을 최소화하기 위해서 w₂= w₁, w₃= 1로 설정함.
public void MutateNode(Random r)
{
if (Genes.Count == 0)
{
return;
}
Gene gene = RandomGenes(r);
if (gene == null || !gene.Enable)
{
return;
}
gene.Enable = false;
Gene gene1 = gene.Clone();
gene1.Out = NodeIndex;
gene1.Weight = 1.0;
gene1.Innovation = Pool.NewInnovation();
gene1.Enable = true;
Genes.Add(gene1);
Gene gene2 = gene.Clone();
gene2.In = NodeIndex;
gene2.Innovation = Pool.NewInnovation();
gene2.Enable = true;
Genes.Add(gene2);
++NodeIndex;
}
public DoubleChromosome(int length, Genes.DoubleGeneFactory doubleGeneFactory)
{
this.length = length;
this.doubleValues = new Genes.DoubleGene[this.length];
for (int i = 0; i < this.length; ++i)
this.doubleValues[i] = (Genes.DoubleGene)doubleGeneFactory.GetNewGene();
}