public void test_WriteSBML_Event_both() { string expected = "<event id=\"e\">\n" + " <trigger>\n" + " <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n" + " <apply>\n" + " <leq/>\n" + " <ci> P1 </ci>\n" + " <ci> t </ci>\n" + " </apply>\n" + " </math>\n" + " </trigger>\n" + " <delay>\n" + " <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n" + " <cn type=\"integer\"> 5 </cn>\n" + " </math>\n" + " </delay>\n" + "</event>"; D.setLevelAndVersion(2,1,false); Event e = D.createModel().createEvent(); e.setId("e"); ASTNode node1 = libsbml.parseFormula("leq(P1,t)"); Trigger t = new Trigger ( 2,1 ); t.setMath(node1); ASTNode node = libsbml.parseFormula("5"); Delay d = new Delay ( 2,1 ); d.setMath(node); e.setDelay(d); e.setTrigger(t); assertEquals( true, equals(expected,e.toSBML()) ); }
public void test_WriteSBML_Event_delayWithSBO() { string expected = "<event id=\"e\">\n" + " <delay sboTerm=\"SBO:0000064\">\n" + " <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n" + " <cn type=\"integer\"> 5 </cn>\n" + " </math>\n" + " </delay>\n" + "</event>"; D.setLevelAndVersion(2,3,false); Event e = D.createModel().createEvent(); e.setId("e"); ASTNode node = libsbml.parseFormula("5"); Delay d = new Delay ( 2,3 ); d.setMath(node); d.setSBOTerm(64); e.setDelay(d); assertEquals( true, equals(expected,e.toSBML()) ); }
public void test_Event_setDelay1() { ASTNode math1 = libsbml.parseFormula("0"); Delay Delay = new Delay(2,4); Delay.setMath(math1); int i = E.setDelay(Delay); assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS ); assertNotEquals(E.getDelay(),null); assertEquals( true, E.isSetDelay() ); i = E.unsetDelay(); assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS ); assertEquals( false, E.isSetDelay() ); }
public void test_Delay_copyConstructor() { Delay o1 = new Delay(2,4); ASTNode node = new ASTNode(libsbml.AST_CONSTANT_PI); o1.setMath(node); node = null; assertTrue( o1.getMath() != null ); Delay o2 = new Delay(o1); assertTrue( o2.getMath() != null ); assertTrue( o2.getParentSBMLObject() == o1.getParentSBMLObject() ); o2 = null; o1 = null; }
public void test_Event_setDelay() { ASTNode math1 = libsbml.parseFormula("0"); Delay Delay = new Delay(2,4); Delay.setMath(math1); E.setDelay(Delay); assertNotEquals(E.getDelay(),null); assertEquals( true, E.isSetDelay() ); if (E.getDelay() == Delay); { } E.setDelay(E.getDelay()); assertNotEquals(E.getDelay(),Delay); E.setDelay(null); assertEquals( false, E.isSetDelay() ); if (E.getDelay() != null); { } }
public void test_Delay() { Delay d = new Delay(2,4); assertEquals( false, (d.hasRequiredElements()) ); d.setMath(libsbml.parseFormula("a+b")); assertEquals( true, d.hasRequiredElements() ); d = null; }
public void test_Event_parent_NULL() { SBMLDocument d = new SBMLDocument(2,4); Model m = d.createModel(); Event c = m.createEvent(); EventAssignment ea = c.createEventAssignment(); Trigger t = new Trigger(2,4); t.setMath(new ASTNode()); Delay dy = new Delay(2,4); dy.setMath(new ASTNode()); c.setTrigger(t); c.setDelay(dy); assertTrue( c.getAncestorOfType(libsbml.SBML_MODEL) == m ); assertTrue( c.getTrigger().getParentSBMLObject() == c ); assertEquals(c.getDelay().getSBMLDocument(),d); assertTrue( ea.getAncestorOfType(libsbml.SBML_EVENT) == c ); Event c1 = c.clone(); d = null; assertTrue( c1.getAncestorOfType(libsbml.SBML_MODEL) == null ); assertTrue( c1.getParentSBMLObject() == null ); assertEquals(c1.getSBMLDocument(),null); assertTrue( c1.getEventAssignment(0).getAncestorOfType(libsbml.SBML_MODEL) == null ); assertTrue( c1.getEventAssignment(0).getAncestorOfType(libsbml.SBML_EVENT) == c1 ); assertTrue( c1.getEventAssignment(0).getParentSBMLObject() != null ); assertEquals(c1.getEventAssignment(0).getSBMLDocument(),null); assertTrue( c1.getTrigger().getAncestorOfType(libsbml.SBML_MODEL) == null ); assertTrue( c1.getTrigger().getAncestorOfType(libsbml.SBML_EVENT) == c1 ); assertTrue( c1.getTrigger().getParentSBMLObject() != null ); assertEquals(c1.getTrigger().getSBMLDocument(),null); assertTrue( c1.getDelay().getAncestorOfType(libsbml.SBML_MODEL) == null ); assertTrue( c1.getDelay().getAncestorOfType(libsbml.SBML_EVENT) == c1 ); assertTrue( c1.getDelay().getParentSBMLObject() != null ); assertEquals(c1.getDelay().getSBMLDocument(),null); c1 = null; }