public static void GenerateOther()//generating from other files
{
Console.Clear();
Console.WriteLine("enter newick file location");
string newick = System.IO.File.ReadAllText(Console.ReadLine());
Console.Clear();
NewickReader n = new NewickReader();
Tree tree = n.Read(newick);
Console.WriteLine("enter assinment file location");
string[] lines = System.IO.File.ReadAllLines(Console.ReadLine());
for (int i = 0; i < lines.Length; i++)
{
lines[i] = lines[i].Replace("\t", "");
}
foreach (Node node in tree.nodeList)
{
if (node.name != "")
{
node.name = lines[Convert.ToInt32(node.name) - 1];
}
}
tree.root.name = "root";
tree.LayoutPosition2();
Console.WriteLine(tree.Print());
Console.ReadLine();
}
public static void NewickGenerate()
{
Console.Clear();
Console.WriteLine("enter newick file location");
string newick = System.IO.File.ReadAllText(Console.ReadLine());
Console.Clear();
NewickReader n = new NewickReader();
Tree tree = n.Read(newick);
tree.root.name = "root";
tree.LayoutPosition2();
Console.WriteLine(tree.Print());
Console.ReadLine();
}