public void Setup()
{
series = new SeriesBest("series", 0.0);
motif = new Motif("motif", AlphabetType.DNA, "accg", 1.0);
gap = new Gap("gap", 3, 3);
gap.Impact = 0.0;
series.Add(motif);
series.Add(gap);
}
public void SetUp () {
seq = new Sequence( AlphabetType.DNA, "atgcatgc" );
series = new SeriesBest( "series", 1.0 );
motif1 = new Motif( "motif1", AlphabetType.DNA, "tgc", 1.0 );
motif2 = new Motif( "motif2", AlphabetType.DNA, "gca", 1.0 );
}
