public void Setup() { series = new SeriesBest("series", 0.0); motif = new Motif("motif", AlphabetType.DNA, "accg", 1.0); gap = new Gap("gap", 3, 3); gap.Impact = 0.0; series.Add(motif); series.Add(gap); }
public void SetUp () { seq = new Sequence( AlphabetType.DNA, "atgcatgc" ); series = new SeriesBest( "series", 1.0 ); motif1 = new Motif( "motif1", AlphabetType.DNA, "tgc", 1.0 ); motif2 = new Motif( "motif2", AlphabetType.DNA, "gca", 1.0 ); }