public static Molecule ReadNative(System.IO.StreamReader in_Renamed)
{
Molecule mol = new Molecule();
//UPGRADE_NOTE: Final was removed from the declaration of 'GENERIC_ERROR '. "ms-help://MS.VSCC.v80/dv_commoner/local/redirect.htm?index='!DefaultContextWindowIndex'&keyword='jlca1003'"
System.String GENERIC_ERROR = "Invalid SketchEl file.";
try
{
System.String line = in_Renamed.ReadLine();
if (!line.StartsWith("SketchEl!"))
throw new System.IO.IOException("Not a SketchEl file.");
int p1 = line.IndexOf('('), p2 = line.IndexOf(','), p3 = line.IndexOf(')');
if (p1 == 0 || p2 == 0 || p3 == 0)
throw new System.IO.IOException(GENERIC_ERROR);
int numAtoms = System.Int32.Parse(line.Substring(p1 + 1, (p2) - (p1 + 1)).Trim());
int numBonds = System.Int32.Parse(line.Substring(p2 + 1, (p3) - (p2 + 1)).Trim());
for (int n = 0; n < numAtoms; n++)
{
line = in_Renamed.ReadLine();
// TODO: verify java's split method syntax: "[\\=\\,\\;]"
System.String[] bits = line.Split('=', ',', ';');
if (bits.Length < 5)
throw new System.IO.IOException(GENERIC_ERROR);
int num = mol.AddAtom(bits[0], System.Double.Parse(bits[1].Trim()), System.Double.Parse(bits[2].Trim()), System.Int32.Parse(bits[3].Trim()), System.Int32.Parse(bits[4].Trim()));
if (bits.Length >= 6 && bits[5].Length > 0 && bits[5][0] == 'e')
mol.SetAtomHExplicit(num, System.Int32.Parse(bits[5].Substring(1)));
}
for (int n = 0; n < numBonds; n++)
{
line = in_Renamed.ReadLine();
System.String[] bits = line.Split('-', '=', ','); // "[\\-\\=\\,]");
if (bits.Length < 4)
throw new System.IO.IOException(GENERIC_ERROR);
mol.AddBond(System.Int32.Parse(bits[0].Trim()), System.Int32.Parse(bits[1].Trim()), System.Int32.Parse(bits[2].Trim()), System.Int32.Parse(bits[3].Trim()));
}
line = in_Renamed.ReadLine();
if (String.CompareOrdinal(line, "!End") != 0)
throw new System.IO.IOException(GENERIC_ERROR);
}
catch (System.Exception)
{
throw new System.IO.IOException(GENERIC_ERROR);
}
return mol;
}
public virtual void propertyChange(System.Object event_sender, SupportClass.PropertyChangingEventArgs ev)
{
bool update = false;
System.String prop = ev.PropertyName;
if ("directoryChanged".Equals(prop))
// changed directory, do nothing much
{
file = null;
update = true;
}
else if ("SelectedFilesChangedProperty".Equals(prop))
// file just got selected
{
file = (System.IO.FileInfo) ev.NewValue;
update = true;
}
if (update)
{
thumbnail = null;
Molecule mol = null;
if (file != null && System.IO.File.Exists(file.FullName))
{
try
{
//UPGRADE_TODO: Constructor 'java.io.FileInputStream.FileInputStream' was converted to 'System.IO.FileStream.FileStream' which has a different behavior. "ms-help://MS.VSCC.v80/dv_commoner/local/redirect.htm?index='!DefaultContextWindowIndex'&keyword='jlca1073_javaioFileInputStreamFileInputStream_javaioFile'"
System.IO.FileStream istr = new System.IO.FileStream(file.FullName, System.IO.FileMode.Open, System.IO.FileAccess.Read);
mol = MoleculeStream.ReadUnknown(istr);
istr.Close();
}
catch (System.IO.IOException)
{
mol = null;
}
}
if (mol == null)
mol = new Molecule();
Replace(mol);
ScaleToFit();
if (Visible)
{
//UPGRADE_TODO: Method 'java.awt.Component.repaint' was converted to 'System.Windows.Forms.Control.Refresh' which has a different behavior. "ms-help://MS.VSCC.v80/dv_commoner/local/redirect.htm?index='!DefaultContextWindowIndex'&keyword='jlca1073_javaawtComponentrepaint'"
Refresh();
}
}
}
public virtual void AddTemplate(Molecule Mol)
{
templ.Add(Mol);
}
// compare to another molecule instance; null is equivalent to empty; return values:
// -1 if Mol < Other
// 0 if Mol == Other
// 1 if Mol > Other
// can be used to sort molecules, albeit crudely; does not do any kind of canonical preprocessing
public virtual int CompareTo(Molecule Other)
{
if (Other == null)
return NumAtoms() == 0?0:1; // null is equivalent to empty
if (NumAtoms() < Other.NumAtoms())
return - 1;
if (NumAtoms() > Other.NumAtoms())
return 1;
if (NumBonds() < Other.NumBonds())
return - 1;
if (NumBonds() > Other.NumBonds())
return 1;
for (int n = 1; n <= NumAtoms(); n++)
{
int c = String.CompareOrdinal(AtomElement(n), Other.AtomElement(n));
if (c != 0)
return c;
if (AtomX(n) < Other.AtomX(n))
return - 1;
if (AtomX(n) > Other.AtomX(n))
return 1;
if (AtomY(n) < Other.AtomY(n))
return - 1;
if (AtomY(n) > Other.AtomY(n))
return 1;
if (AtomCharge(n) < Other.AtomCharge(n))
return - 1;
if (AtomCharge(n) > Other.AtomCharge(n))
return 1;
if (AtomUnpaired(n) < Other.AtomUnpaired(n))
return - 1;
if (AtomUnpaired(n) > Other.AtomUnpaired(n))
return 1;
if (AtomHExplicit(n) < Other.AtomHExplicit(n))
return - 1;
if (AtomHExplicit(n) > Other.AtomHExplicit(n))
return 1;
}
for (int n = 1; n <= NumBonds(); n++)
{
if (BondFrom(n) < Other.BondFrom(n))
return - 1;
if (BondFrom(n) > Other.BondFrom(n))
return 1;
if (BondTo(n) < Other.BondTo(n))
return - 1;
if (BondTo(n) > Other.BondTo(n))
return 1;
if (BondOrder(n) < Other.BondOrder(n))
return - 1;
if (BondOrder(n) > Other.BondOrder(n))
return 1;
if (BondType(n) < Other.BondType(n))
return - 1;
if (BondType(n) > Other.BondType(n))
return 1;
}
return 0;
}
// returns an equivalent replica of the molecule
public virtual Molecule Clone()
{
Molecule mol = new Molecule();
for (int n = 1; n <= NumAtoms(); n++)
{
Atom a = atoms[n - 1];
int num = mol.AddAtom(a.Element, a.X, a.Y, a.Charge, a.Unpaired);
mol.SetAtomHExplicit(num, AtomHExplicit(n));
}
for (int n = 1; n <= NumBonds(); n++)
{
Bond b = bonds[n - 1];
mol.AddBond(b.From, b.To, b.Order, b.Type);
}
return mol;
}
private void InitBlock(Molecule enclosingInstance)
{
this.enclosingInstance = enclosingInstance;
}
public static void WriteNative(System.IO.StreamWriter output, Molecule mol)
{
//UPGRADE_ISSUE: Class 'java.text.DecimalFormat' was not converted. "ms-help://MS.VSCC.v80/dv_commoner/local/redirect.htm?index='!DefaultContextWindowIndex'&keyword='jlca1000_javatextDecimalFormat'"
//UPGRADE_ISSUE: Constructor 'java.text.DecimalFormat.DecimalFormat' was not converted. "ms-help://MS.VSCC.v80/dv_commoner/local/redirect.htm?index='!DefaultContextWindowIndex'&keyword='jlca1000_javatextDecimalFormat'"
// DecimalFormat fmt = new DecimalFormat("0.0000");
string fmtStr = "N4";
output.Write("SketchEl!(" + mol.NumAtoms() + "," + mol.NumBonds() + ")\n");
for (int n = 1; n <= mol.NumAtoms(); n++)
{
System.String hy = mol.AtomHExplicit(n) != Molecule.HEXPLICIT_UNKNOWN?("e" + mol.AtomHExplicit(n)):("i" + mol.AtomHydrogens(n));
output.Write(mol.AtomElement(n) + "=" + mol.AtomX(n).ToString(fmtStr) + "," + mol.AtomY(n).ToString(fmtStr) + ";" + mol.AtomCharge(n) + "," + mol.AtomUnpaired(n) + "," + hy + "\n");
}
for (int n = 1; n <= mol.NumBonds(); n++)
{
output.Write(mol.BondFrom(n) + "-" + mol.BondTo(n) + "=" + mol.BondOrder(n) + "," + mol.BondType(n) + "\n");
}
output.Write("!End\n");
output.Flush();
}
internal virtual void TestMol()
{
Molecule mol = new Molecule();
mol.AddAtom("N", 0, 0);
mol.AddAtom("C", 1.2, 0);
mol.AddAtom("O", 2, 0.8);
mol.AddAtom("H", 3, - 0.8);
mol.AddAtom("H", 4, 0);
mol.AddBond(1, 2, 1);
mol.AddBond(2, 3, 2);
mol.AddBond(3, 4, 1);
mol.AddBond(4, 5, 0);
editor.Replace(mol);
}
public static void WriteCMLXML(System.IO.Stream ostr, Molecule mol)
{
//UPGRADE_WARNING: At least one expression was used more than once in the target code. "ms-help://MS.VSCC.v80/dv_commoner/local/redirect.htm?index='!DefaultContextWindowIndex'&keyword='jlca1181'"
using (StreamWriter writer = new System.IO.StreamWriter(ostr, System.Text.Encoding.Default))
{
WriteCMLXML(writer, mol);
}
}
public static void WriteCMLXML(System.IO.StreamWriter output, Molecule mol)
{
output.Write("<cml>\n");
output.Write(" <molecule xmlns=\"http://www.xml-cml.org/schema/cml2/core\">\n");
output.Write(" <atomArray>\n");
for (int n = 1; n <= mol.NumAtoms(); n++)
{
output.Write(" <atom id=\"a" + n + "\" elementType=\"" + mol.AtomElement(n) + "\"" + " x2=\"" + mol.AtomX(n) + "\" y2=\"" + mol.AtomY(n) + "\" hydrogenCount=\"" + mol.AtomHydrogens(n) + "\"/>\n");
}
output.Write(" </atomArray>\n");
output.Write(" <bondArray>\n");
for (int n = 1; n <= mol.NumBonds(); n++)
{
output.Write(" <bond id=\"b" + n + "\" atomRefs2=\"a" + mol.BondFrom(n) + " a" + mol.BondTo(n) + "\" order=\"" + mol.BondOrder(n) + "\"/>\n");
}
output.Write(" </bondArray>\n");
output.Write(" </molecule>\n");
output.Write("</cml>\n");
output.Flush();
}
public static void WriteMDLMOL(System.IO.StreamWriter output, Molecule mol)
{
//UPGRADE_ISSUE: Class 'java.text.DecimalFormat' was not converted. "ms-help://MS.VSCC.v80/dv_commoner/local/redirect.htm?index='!DefaultContextWindowIndex'&keyword='jlca1000_javatextDecimalFormat'"
//UPGRADE_ISSUE: Constructor 'java.text.DecimalFormat.DecimalFormat' was not converted. "ms-help://MS.VSCC.v80/dv_commoner/local/redirect.htm?index='!DefaultContextWindowIndex'&keyword='jlca1000_javatextDecimalFormat'"
// DecimalFormat fmt = new DecimalFormat("0.0000");
string fmtStr = "N4";
output.Write("\nNuGenChem MOLfile\n\n");
output.Write(intrpad(mol.NumAtoms(), 3) + intrpad(mol.NumBonds(), 3) + " 0 0 0 0 0 0 0 0999 V2000\n");
System.String line;
for (int n = 1; n <= mol.NumAtoms(); n++)
{
string str = mol.AtomX(n).ToString(fmtStr);
line = rep(" ", 10 - str.Length) + str;
str = mol.AtomY(n).ToString(fmtStr);
line += (rep(" ", 10 - str.Length) + str);
line += " 0.0000 ";
str = mol.AtomElement(n);
line += (str + rep(" ", 4 - str.Length) + "0");
int chg = mol.AtomCharge(n), spin = mol.AtomUnpaired(n);
if (chg >= - 3 && chg <= - 1)
chg = 4 - chg;
else if (chg == 0 && spin == 2)
chg = 4;
else if (chg < 1 || chg > 3)
chg = 0;
line += (intrpad(chg, 3) + " 0 0 0 0 0 0 0 0 0 0");
output.Write(line + "\n");
}
for (int n = 1; n <= mol.NumBonds(); n++)
{
int type = mol.BondOrder(n);
if (type < 1 || type > 3)
type = 1;
int stereo = mol.BondType(n);
if (stereo == Molecule.BONDTYPE_NORMAL)
{
}
else if (stereo == Molecule.BONDTYPE_INCLINED)
{
stereo = 1; type = 1;
}
else if (stereo == Molecule.BONDTYPE_DECLINED)
{
stereo = 6; type = 1;
}
else if (stereo == Molecule.BONDTYPE_UNKNOWN)
{
stereo = 4; type = 1;
}
else
stereo = 0;
output.Write(intrpad(mol.BondFrom(n), 3) + intrpad(mol.BondTo(n), 3) + intrpad(type, 3) + intrpad(stereo, 3) + " 0 0 0\n");
}
int count = 0;
line = "";
for (int n = 1; n <= mol.NumAtoms(); n++)
if (mol.AtomCharge(n) != 0)
{
line += (intrpad(n, 4) + intrpad(mol.AtomCharge(n), 4));
count++;
if (count == 8)
{
output.Write("M CHG" + intrpad(count, 3) + line + "\n");
count = 0; line = "";
}
}
if (count > 0)
output.Write("M CHG" + intrpad(count, 3) + line + "\n");
count = 0;
line = "";
for (int n = 1; n <= mol.NumAtoms(); n++)
if (mol.AtomUnpaired(n) != 0)
{
line += (intrpad(n, 4) + intrpad(mol.AtomUnpaired(n), 4));
count++;
if (count == 8)
{
output.Write("M RAD" + intrpad(count, 3) + line + "\n");
count = 0; line = "";
}
}
if (count > 0)
output.Write("M RAD" + intrpad(count, 3) + line + "\n");
output.Write("M END\n");
output.Flush();
}
internal static Molecule ReadXML(FileStream istr)
{
Molecule mol = new Molecule();
const string NAMESPACE = "http://www.xml-cml.org/schema/cml2/core";
const string ATTRIBUTENS = "";
XmlDocument xmlDoc = new XmlDocument();
xmlDoc.Load(istr);
XPathNavigator navigator = xmlDoc.CreateNavigator();
if (navigator.MoveToFirstChild())
{
navigator.MoveToChild("molecule", NAMESPACE);
//navigator.MoveToFirstChild();
if (navigator.MoveToChild("atomArray", NAMESPACE))
{
if (navigator.MoveToChild("atom", NAMESPACE))
{
do
{
string elementType= navigator.GetAttribute("elementType", ATTRIBUTENS);
string x2String = navigator.GetAttribute("x2", ATTRIBUTENS);
if (!string.IsNullOrEmpty(x2String))
{
double x2 = Utility.SafeDouble(x2String);
double y2 = Utility.SafeDouble(navigator.GetAttribute("y2", ATTRIBUTENS));
int hydrogenCount = Utility.SafeInt(navigator.GetAttribute("hydrogenCount", ATTRIBUTENS));
// TODO: How do we handle hydrogen count?
mol.AddAtom(elementType, x2, y2);
}
else
{
double x3 = Utility.SafeDouble(navigator.GetAttribute("x3", ATTRIBUTENS));
double y3 = Utility.SafeDouble(navigator.GetAttribute("y3", ATTRIBUTENS));
int hydrogenCount = Utility.SafeInt(navigator.GetAttribute("hydrogenCount", ATTRIBUTENS));
// TODO: How do we handle hydrogen count?
mol.AddAtom(elementType, x3, y3);
}
} while (navigator.MoveToNext("atom", NAMESPACE));
navigator.MoveToParent();
}
navigator.MoveToParent();
}
if (navigator.MoveToChild("bondArray", NAMESPACE))
{
if (navigator.MoveToChild("bond", NAMESPACE))
{
do
{
string atomRefs = navigator.GetAttribute("atomRefs2", ATTRIBUTENS);
string[] parts = atomRefs.Split(' ');
if (parts.Length == 2)
{
int from = Utility.SafeInt(parts[0].Substring(1));
int to = Utility.SafeInt(parts[1].Substring(1));
int order = Utility.SafeInt(navigator.GetAttribute("order", ATTRIBUTENS));
int type = 0; // Where or is type stored?
// TODO: How do we handle hydrogen count?
mol.AddBond(from, to, order, type);
}
} while (navigator.MoveToNext("bond", NAMESPACE));
navigator.MoveToParent();
}
navigator.MoveToParent();
}
}
return mol;
}
public static Molecule ReadMDLMOL(StreamReader in_Renamed)
{
Molecule mol = new Molecule();
//UPGRADE_NOTE: Final was removed from the declaration of 'GENERIC_ERROR '. "ms-help://MS.VSCC.v80/dv_commoner/local/redirect.htm?index='!DefaultContextWindowIndex'&keyword='jlca1003'"
System.String GENERIC_ERROR = "Invalid MDL MOL file.";
try
{
System.String line = null;
for (int n = 0; n < 4; n++)
line = in_Renamed.ReadLine();
if (line == null || !line.Substring(34, (39) - (34)).Equals("V2000"))
throw new System.IO.IOException(GENERIC_ERROR);
int numAtoms = System.Int32.Parse(line.Substring(0, (3) - (0)).Trim());
int numBonds = System.Int32.Parse(line.Substring(3, (6) - (3)).Trim());
for (int n = 0; n < numAtoms; n++)
{
line = in_Renamed.ReadLine();
double x = System.Double.Parse(line.Substring(0, (10) - (0)).Trim());
double y = System.Double.Parse(line.Substring(10, (20) - (10)).Trim());
System.String el = line.Substring(31, (33) - (31)).Trim();
int chg = System.Int32.Parse(line.Substring(36, (39) - (36)).Trim()), rad = 0;
if (chg <= 3)
{
}
else if (chg == 4)
{
chg = 0; rad = 2;
}
else
chg = 4 - chg;
mol.AddAtom(el, x, y, chg, rad);
}
for (int n = 0; n < numBonds; n++)
{
line = in_Renamed.ReadLine();
int from = System.Int32.Parse(line.Substring(0, (3) - (0)).Trim()), to = System.Int32.Parse(line.Substring(3, (6) - (3)).Trim());
int type = System.Int32.Parse(line.Substring(6, (9) - (6)).Trim()), stereo = System.Int32.Parse(line.Substring(9, (12) - (9)).Trim());
if (from == to || from < 1 || from > numAtoms || to < 1 || to > numAtoms)
throw new System.IO.IOException(GENERIC_ERROR);
int order = type >= 1 && type <= 3?type:1;
int style = Molecule.BONDTYPE_NORMAL;
if (stereo == 1)
style = Molecule.BONDTYPE_INCLINED;
else if (stereo == 6)
style = Molecule.BONDTYPE_DECLINED;
else if (stereo == 3 || stereo == 4)
style = Molecule.BONDTYPE_UNKNOWN;
mol.AddBond(from, to, order, style);
}
while (true)
{
line = in_Renamed.ReadLine();
if (line.StartsWith("M END"))
break;
int type = 0;
if (line.StartsWith("M CHG"))
type = 1;
else if (line.StartsWith("M RAD"))
type = 2;
if (type > 0)
{
int len = System.Int32.Parse(line.Substring(6, (9) - (6)).Trim());
for (int n = 0; n < len; n++)
{
int apos = System.Int32.Parse(line.Substring(9 + 8 * n, (13 + 8 * n) - (9 + 8 * n)).Trim());
int aval = System.Int32.Parse(line.Substring(13 + 8 * n, (17 + 8 * n) - (13 + 8 * n)).Trim());
if (type == 1)
mol.SetAtomCharge(apos, aval);
else
mol.SetAtomUnpaired(apos, aval);
}
}
}
}
catch (System.Exception)
{
throw new System.IO.IOException(GENERIC_ERROR);
}
return mol;
}
//#region ITemplSelectListener Members
//void ITemplSelectListener.TemplSelected(Molecule mol, int idx)
//{
//}
//#endregion
#region ITemplSelectListener Members
void ITemplSelectListener.TemplSelected(Molecule mol, int idx)
{
lastTemplate = mol;
templateIdx = idx;
editor.SetToolTemplate(mol, idx);
}
public Atom(Molecule enclosingInstance)
{
InitBlock(enclosingInstance);
}
public virtual void SetMolecule(Molecule Mol)
{
editor.Replace(Mol);
editor.ScaleToFit();
editor.NotifySaved();
}
public Bond(Molecule enclosingInstance)
{
InitBlock(enclosingInstance);
}
public virtual void TemplSelected(Molecule mol, int idx)
{
lastTemplate = mol;
templateIdx = idx;
editor.SetToolTemplate(mol, idx);
}
public DialogEdit(Control Parent, Molecule Mol, List<int> SelIdx)
{
// super(Parent, "Edit Molecule", true)
mol = Mol.Clone();
aselidx = SelIdx;
//UPGRADE_ISSUE: The following fragment of code could not be parsed and was not converted. "ms-help://MS.VSCC.v80/dv_commoner/local/redirect.htm?index='!DefaultContextWindowIndex'&keyword='jlca1156'"
bselidx = new List<int>();
for (int n = 1; n <= mol.NumBonds(); n++)
if (aselidx.IndexOf(mol.BondFrom(n)) >= 0 && aselidx.IndexOf(mol.BondTo(n)) >= 0)
bselidx.Add(n);
//UPGRADE_ISSUE: Method 'javax.swing.JDialog.setLayout' was not converted. "ms-help://MS.VSCC.v80/dv_commoner/local/redirect.htm?index='!DefaultContextWindowIndex'&keyword='jlca1000_javaxswingJDialogsetLayout_javaawtLayoutManager'"
//UPGRADE_ISSUE: Constructor 'java.awt.BorderLayout.BorderLayout' was not converted. "ms-help://MS.VSCC.v80/dv_commoner/local/redirect.htm?index='!DefaultContextWindowIndex'&keyword='jlca1000_javaawtBorderLayout'"
/*
setLayout(new BorderLayout());*/
atoms = new AnonymousClassJTable(this, CompileAtomData(), new System.String[] { "#", "El", "X", "Y", "Charge", "Unpaired", "HExplicit" });
bonds = new AnonymousClassJTable1(this, CompileBondData(), new System.String[] { "#", "From", "To", "Order", "Type" });
//UPGRADE_TODO: Method 'javax.swing.table.TableColumn.setCellEditor' was not converted. "ms-help://MS.VSCC.v80/dv_commoner/local/redirect.htm?index='!DefaultContextWindowIndex'&keyword='jlca1095'"
//UPGRADE_TODO: The equivalent in .NET for method 'javax.swing.table.TableColumnModel.getColumn' may return a different value. "ms-help://MS.VSCC.v80/dv_commoner/local/redirect.htm?index='!DefaultContextWindowIndex'&keyword='jlca1043'"
// ((System.Data.DataTable)atoms.DataSource).Columns[0].setCellEditor(null);
System.Windows.Forms.ComboBox bondTypes = new System.Windows.Forms.ComboBox();
for (int n = 0; n < BOND_TYPES.Length; n++)
bondTypes.Items.Add(BOND_TYPES[n]);
//UPGRADE_TODO: Method 'javax.swing.table.TableColumn.setCellEditor' was not converted. "ms-help://MS.VSCC.v80/dv_commoner/local/redirect.htm?index='!DefaultContextWindowIndex'&keyword='jlca1095'"
//UPGRADE_TODO: The equivalent in .NET for method 'javax.swing.table.TableColumnModel.getColumn' may return a different value. "ms-help://MS.VSCC.v80/dv_commoner/local/redirect.htm?index='!DefaultContextWindowIndex'&keyword='jlca1043'"
//UPGRADE_ISSUE: Constructor 'javax.swing.DefaultCellEditor.DefaultCellEditor' was not converted. "ms-help://MS.VSCC.v80/dv_commoner/local/redirect.htm?index='!DefaultContextWindowIndex'&keyword='jlca1000_javaxswingDefaultCellEditor'"
// TODO: Have to see this in action before I can tel what they need to do.
// ((System.Data.DataTable)bonds.DataSource).Columns[4].setCellEditor(new DefaultCellEditor(bondTypes));
System.Windows.Forms.Panel tabAtoms = new System.Windows.Forms.Panel(), tabBonds = new System.Windows.Forms.Panel();
//UPGRADE_ISSUE: Method 'java.awt.Container.setLayout' was not converted. "ms-help://MS.VSCC.v80/dv_commoner/local/redirect.htm?index='!DefaultContextWindowIndex'&keyword='jlca1000_javaawtContainersetLayout_javaawtLayoutManager'"
//UPGRADE_ISSUE: Constructor 'java.awt.BorderLayout.BorderLayout' was not converted. "ms-help://MS.VSCC.v80/dv_commoner/local/redirect.htm?index='!DefaultContextWindowIndex'&keyword='jlca1000_javaawtBorderLayout'"
/*
tabAtoms.setLayout(new BorderLayout());*/
//UPGRADE_ISSUE: Method 'java.awt.Container.setLayout' was not converted. "ms-help://MS.VSCC.v80/dv_commoner/local/redirect.htm?index='!DefaultContextWindowIndex'&keyword='jlca1000_javaawtContainersetLayout_javaawtLayoutManager'"
//UPGRADE_ISSUE: Constructor 'java.awt.BorderLayout.BorderLayout' was not converted. "ms-help://MS.VSCC.v80/dv_commoner/local/redirect.htm?index='!DefaultContextWindowIndex'&keyword='jlca1000_javaawtBorderLayout'"
/*
tabBonds.setLayout(new BorderLayout());*/
//UPGRADE_ISSUE: Method 'javax.swing.JTable.setPreferredScrollableViewportSize' was not converted. "ms-help://MS.VSCC.v80/dv_commoner/local/redirect.htm?index='!DefaultContextWindowIndex'&keyword='jlca1000_javaxswingJTablesetPreferredScrollableViewportSize_javaawtDimension'"
// TODO: atoms.setPreferredScrollableViewportSize(new System.Drawing.Size(350, 200));
//UPGRADE_ISSUE: Method 'javax.swing.JTable.setPreferredScrollableViewportSize' was not converted. "ms-help://MS.VSCC.v80/dv_commoner/local/redirect.htm?index='!DefaultContextWindowIndex'&keyword='jlca1000_javaxswingJTablesetPreferredScrollableViewportSize_javaawtDimension'"
// TODO: bonds.setPreferredScrollableViewportSize(new System.Drawing.Size(350, 200));
//UPGRADE_TODO: Constructor 'javax.swing.JScrollPane.JScrollPane' was converted to 'System.Windows.Forms.ScrollableControl.ScrollableControl' which has a different behavior. "ms-help://MS.VSCC.v80/dv_commoner/local/redirect.htm?index='!DefaultContextWindowIndex'&keyword='jlca1073_javaxswingJScrollPaneJScrollPane_javaawtComponent'"
System.Windows.Forms.ScrollableControl temp_scrollablecontrol2;
temp_scrollablecontrol2 = new System.Windows.Forms.ScrollableControl();
temp_scrollablecontrol2.AutoScroll = true;
temp_scrollablecontrol2.Controls.Add(atoms);
//UPGRADE_TODO: Method 'java.awt.Container.add' was converted to 'System.Windows.Forms.ContainerControl.Controls.Add' which has a different behavior. "ms-help://MS.VSCC.v80/dv_commoner/local/redirect.htm?index='!DefaultContextWindowIndex'&keyword='jlca1073_javaawtContaineradd_javaawtComponent'"
System.Windows.Forms.Control temp_Control;
temp_Control = temp_scrollablecontrol2;
tabAtoms.Controls.Add(temp_Control);
//UPGRADE_TODO: Constructor 'javax.swing.JScrollPane.JScrollPane' was converted to 'System.Windows.Forms.ScrollableControl.ScrollableControl' which has a different behavior. "ms-help://MS.VSCC.v80/dv_commoner/local/redirect.htm?index='!DefaultContextWindowIndex'&keyword='jlca1073_javaxswingJScrollPaneJScrollPane_javaawtComponent'"
System.Windows.Forms.ScrollableControl temp_scrollablecontrol4;
temp_scrollablecontrol4 = new System.Windows.Forms.ScrollableControl();
temp_scrollablecontrol4.AutoScroll = true;
temp_scrollablecontrol4.Controls.Add(bonds);
//UPGRADE_TODO: Method 'java.awt.Container.add' was converted to 'System.Windows.Forms.ContainerControl.Controls.Add' which has a different behavior. "ms-help://MS.VSCC.v80/dv_commoner/local/redirect.htm?index='!DefaultContextWindowIndex'&keyword='jlca1073_javaawtContaineradd_javaawtComponent'"
System.Windows.Forms.Control temp_Control2;
temp_Control2 = temp_scrollablecontrol4;
tabBonds.Controls.Add(temp_Control2);
tabs = new System.Windows.Forms.TabControl();
//UPGRADE_TODO: Method 'javax.swing.JTabbedPane.addTab' was converted to 'SupportClass.TabControlSupport.AddTab' which has a different behavior. "ms-help://MS.VSCC.v80/dv_commoner/local/redirect.htm?index='!DefaultContextWindowIndex'&keyword='jlca1073_javaxswingJTabbedPaneaddTab_javalangString_javaawtComponent'"
SupportClass.TabControlSupport.AddTab(tabs, "Atoms", tabAtoms);
//UPGRADE_TODO: Method 'javax.swing.JTabbedPane.addTab' was converted to 'SupportClass.TabControlSupport.AddTab' which has a different behavior. "ms-help://MS.VSCC.v80/dv_commoner/local/redirect.htm?index='!DefaultContextWindowIndex'&keyword='jlca1073_javaxswingJTabbedPaneaddTab_javalangString_javaawtComponent'"
SupportClass.TabControlSupport.AddTab(tabs, "Bonds", tabBonds);
//UPGRADE_TODO: Method 'java.awt.Container.add' was converted to 'System.Windows.Forms.ContainerControl.Controls.Add' which has a different behavior. "ms-help://MS.VSCC.v80/dv_commoner/local/redirect.htm?index='!DefaultContextWindowIndex'&keyword='jlca1073_javaawtContaineradd_javaawtComponent_javalangObject'"
Controls.Add(tabs);
tabs.Dock = System.Windows.Forms.DockStyle.Fill;
tabs.BringToFront();
System.Windows.Forms.Panel buttons = new System.Windows.Forms.Panel();
//UPGRADE_TODO: Constructor 'java.awt.FlowLayout.FlowLayout' was converted to 'System.Object[]' which has a different behavior. "ms-help://MS.VSCC.v80/dv_commoner/local/redirect.htm?index='!DefaultContextWindowIndex'&keyword='jlca1073_javaawtFlowLayoutFlowLayout_int'"
buttons.Tag = new System.Object[] { (int)System.Drawing.ContentAlignment.TopRight, 5, 5 };
buttons.Layout += new System.Windows.Forms.LayoutEventHandler(SupportClass.FlowLayoutResize);
accept = SupportClass.ButtonSupport.CreateStandardButton("Accept");
accept.Click += new System.EventHandler(this.actionPerformed);
SupportClass.CommandManager.CheckCommand(accept);
reject = SupportClass.ButtonSupport.CreateStandardButton("Reject");
reject.Click += new System.EventHandler(this.actionPerformed);
SupportClass.CommandManager.CheckCommand(reject);
//UPGRADE_TODO: Method 'java.awt.Container.add' was converted to 'System.Windows.Forms.ContainerControl.Controls.Add' which has a different behavior. "ms-help://MS.VSCC.v80/dv_commoner/local/redirect.htm?index='!DefaultContextWindowIndex'&keyword='jlca1073_javaawtContaineradd_javaawtComponent'"
buttons.Controls.Add(accept);
//UPGRADE_TODO: Method 'java.awt.Container.add' was converted to 'System.Windows.Forms.ContainerControl.Controls.Add' which has a different behavior. "ms-help://MS.VSCC.v80/dv_commoner/local/redirect.htm?index='!DefaultContextWindowIndex'&keyword='jlca1073_javaawtContaineradd_javaawtComponent'"
buttons.Controls.Add(reject);
//UPGRADE_TODO: Method 'java.awt.Container.add' was converted to 'System.Windows.Forms.ContainerControl.Controls.Add' which has a different behavior. "ms-help://MS.VSCC.v80/dv_commoner/local/redirect.htm?index='!DefaultContextWindowIndex'&keyword='jlca1073_javaawtContaineradd_javaawtComponent_javalangObject'"
Controls.Add(buttons);
buttons.Dock = System.Windows.Forms.DockStyle.Bottom;
buttons.SendToBack();
// TODO: What does pack do?
// pack();
}