public void TestInitialize()
{
IFhirModel _fhirModel;
FhirPropertyIndex _propIndex;
ResourceVisitor _resourceVisitor;
ElementIndexer _elementIndexer;
var _indexStoreMock = new Mock<IIndexStore>();
var spPatientName = new SearchParamDefinition() { Resource = "Patient", Name = "name", Description = @"A portion of either family or given name of the patient", Type = SearchParamType.String, Path = new string[] { "Patient.name", } };
var searchParameters = new List<SearchParamDefinition> { spPatientName };
var resources = new Dictionary<Type, string> { { typeof(Patient), "Patient" }, { typeof(HumanName), "HumanName" } };
var enums = new List<Type>();
//CK: I use real objects: saves me a lot of mocking and provides for a bit of integration testing.
_fhirModel = new FhirModel(resources, searchParameters, enums);
_propIndex = new FhirPropertyIndex(_fhirModel, new List<Type> { typeof(Patient), typeof(HumanName) });
_resourceVisitor = new ResourceVisitor(_propIndex);
_elementIndexer = new ElementIndexer(_fhirModel);
//_indexStoreMock.Setup(ixs => ixs.Save(It.IsAny<IndexValue>))
sutLimited = new IndexService(_fhirModel, _propIndex, _resourceVisitor, _elementIndexer, _indexStoreMock.Object);
_fhirModel = new FhirModel(); //For this test I want all available types and searchparameters.
_propIndex = new FhirPropertyIndex(_fhirModel);
_resourceVisitor = new ResourceVisitor(_propIndex);
_elementIndexer = new ElementIndexer(_fhirModel);
sutFull = new IndexService(_fhirModel, _propIndex, _resourceVisitor, _elementIndexer, _indexStoreMock.Object);
}
/// <summary>
/// Returns true if the search parameter is one of the following types: Number, Date or Quantity.
/// See https://www.hl7.org/fhir/stu3/search.html#prefix for more information.
/// </summary>
/// <param name="searchParamDefinitions">
/// A List of <see cref="SearchParamDefinition"/>, since this is an extension this is usually a reference
/// to ModelInfo.SearcParameters.
/// </param>
/// <param name="name">A <see cref="string"/> representing the name of the search parameter.</param>
/// <returns>Returns true if the search parameter is of type Number, Date or Quanity, otherwise false.</returns>
internal static bool CanHaveOperatorPrefix(this List <SearchParamDefinition> searchParamDefinitions, string name)
{
SearchParamDefinition searchParamDefinition = searchParamDefinitions.Find(p => p.Name == name);
return(searchParamDefinition != null && (searchParamDefinition.Type == SearchParamType.Number ||
searchParamDefinition.Type == SearchParamType.Date ||
searchParamDefinition.Type == SearchParamType.Quantity));
}
public IndexServiceTests()
{
var indexStoreMock = new Mock <IIndexStore>();
_examplePatientJson = TextFileHelper.ReadTextFileFromDisk(
$".{Path.DirectorySeparatorChar}Examples{Path.DirectorySeparatorChar}patient-example.json");
_exampleAppointmentJson = TextFileHelper.ReadTextFileFromDisk(
$".{Path.DirectorySeparatorChar}Examples{Path.DirectorySeparatorChar}appointment-example2doctors.json");
_carePlanWithContainedGoal = TextFileHelper.ReadTextFileFromDisk(
$".{Path.DirectorySeparatorChar}Examples{Path.DirectorySeparatorChar}careplan-example-f201-renal.json");
_exampleObservationJson = TextFileHelper.ReadTextFileFromDisk(
$".{Path.DirectorySeparatorChar}Examples{Path.DirectorySeparatorChar}observation-example-bloodpressure.json");
var spPatientName = new SearchParamDefinition
{
Resource = "Patient",
Name = "name",
Description = new Markdown(@"A portion of either family or given name of the patient"),
Type = SearchParamType.String,
Path = new[] { "Patient.name" },
Expression = "Patient.name"
};
var spMiddleName = new SearchParamDefinition
{
Resource = "Patient",
Name = "middlename",
Type = SearchParamType.String,
Path = new[]
{
"Patient.name.extension.where(url='http://hl7.no/fhir/StructureDefinition/no-basis-middlename')"
},
Expression =
"Patient.name.extension.where(url='http://hl7.no/fhir/StructureDefinition/no-basis-middlename')"
};
var searchParameters = new List <SearchParamDefinition> {
spPatientName, spMiddleName
};
var resources =
new Dictionary <Type, string> {
{ typeof(Patient), "Patient" }, { typeof(HumanName), "HumanName" }
};
// For this test setup we want a limited available types and search parameters.
IFhirModel limitedFhirModel = new FhirModel(resources, searchParameters);
var limitedElementIndexer = new ElementIndexer(limitedFhirModel, new Mock <ILogger <ElementIndexer> >().Object);
_limitedIndexService = new IndexService(limitedFhirModel, indexStoreMock.Object, limitedElementIndexer);
// For this test setup we want all available types and search parameters.
IFhirModel fullFhirModel = new FhirModel();
var fullElementIndexer = new ElementIndexer(fullFhirModel, new Mock <ILogger <ElementIndexer> >().Object);
_fullIndexService = new IndexService(fullFhirModel, indexStoreMock.Object, fullElementIndexer);
}
private SearchParameter createSearchParameterFromSearchParamDefinition(SearchParamDefinition def)
{
var result = new ComparableSearchParameter();
result.Name = def.Name;
result.Code = def.Name; //CK: SearchParamDefinition has no Code, but in all current SearchParameter resources, name and code are equal.
result.Base = new List <ResourceType?> {
GetResourceTypeForResourceName(def.Resource)
};
result.Type = def.Type;
result.Target = def.Target != null?def.Target.ToList().Cast <ResourceType?>() : new List <ResourceType?>();
result.Description = def.Description;
// NOTE: This is a fix to handle an issue in firely-net-sdk
// where the expression 'ConceptMap.source as uri' returns
// a string instead of uri.
// FIXME: On a longer term we should refactor the
// SearchParameter in-memory cache so we can more elegantly
// swap out a SearchParameter
if (def.Resource == ResourceType.ConceptMap.GetLiteral())
{
if (def.Name == "source-uri")
{
result.Expression = "ConceptMap.source.as(uri)";
}
else if (def.Name == "target-uri")
{
result.Expression = "ConceptMap.target.as(uri)";
}
else
{
result.Expression = def.Expression;
}
}
else
{
result.Expression = def.Expression;
}
//Strip off the [x], for example in Condition.onset[x].
result.SetPropertyPath(def.Path?.Select(p => p.Replace("[x]", "")).ToArray());
//Watch out: SearchParameter is not very good yet with Composite parameters.
//Therefore we include a reference to the original SearchParamDefinition :-)
result.SetOriginalDefinition(def);
return(result);
}
private SearchParameter createSearchParameterFromSearchParamDefinition(SearchParamDefinition def)
{
var result = new SearchParameter();
result.Name = def.Name;
result.Code = def.Name; //CK: SearchParamDefinition has no Code, but in all current SearchParameter resources, name and code are equal.
result.Base = def.Resource;
result.Type = def.Type;
result.Target = def.Target != null?def.Target.Select(t => GetResourceNameForResourceType(t)) : new List <string>();
result.Description = def.Description;
//Strip off the [x], for example in Condition.onset[x].
result.SetPropertyPath(def.Path?.Select(p => p.Replace("[x]", "")).ToArray());
//Watch out: SearchParameter is not very good yet with Composite parameters.
//Therefore we include a reference to the original SearchParamDefinition :-)
result.SetOriginalDefinition(def);
return(result);
}
public void TestInitialize()
{
IFhirModel _fhirModel;
FhirPropertyIndex _propIndex;
ResourceVisitor _resourceVisitor;
ElementIndexer _elementIndexer;
var _indexStoreMock = new Mock <IIndexStore>();
var spPatientName = new SearchParamDefinition()
{
Resource = "Patient", Name = "name", Description = @"A portion of either family or given name of the patient", Type = SearchParamType.String, Path = new string[] { "Patient.name", }
};
var searchParameters = new List <SearchParamDefinition> {
spPatientName
};
var resources = new Dictionary <Type, string> {
{ typeof(Patient), "Patient" }, { typeof(HumanName), "HumanName" }
};
var enums = new List <Type>();
//CK: I use real objects: saves me a lot of mocking and provides for a bit of integration testing.
_fhirModel = new FhirModel(resources, searchParameters, enums);
_propIndex = new FhirPropertyIndex(_fhirModel, new List <Type> {
typeof(Patient), typeof(HumanName)
});
_resourceVisitor = new ResourceVisitor(_propIndex);
_elementIndexer = new ElementIndexer(_fhirModel);
//_indexStoreMock.Setup(ixs => ixs.Save(It.IsAny<IndexValue>))
sutLimited = new IndexService(_fhirModel, _propIndex, _resourceVisitor, _elementIndexer, _indexStoreMock.Object);
_fhirModel = new FhirModel(); //For this test I want all available types and searchparameters.
_propIndex = new FhirPropertyIndex(_fhirModel);
_resourceVisitor = new ResourceVisitor(_propIndex);
_elementIndexer = new ElementIndexer(_fhirModel);
sutFull = new IndexService(_fhirModel, _propIndex, _resourceVisitor, _elementIndexer, _indexStoreMock.Object);
}
private SearchParameter createSearchParameterFromSearchParamDefinition(SearchParamDefinition def)
{
var result = new SearchParameter();
result.Name = def.Name;
result.Code = def.Name; //CK: SearchParamDefinition has no Code, but in all current SearchParameter resources, name and code are equal.
result.Base = def.Resource;
result.Type = def.Type;
result.Target = def.Target != null ? def.Target.Select(t => GetResourceNameForResourceType(t)) : new List<string>();
result.Description = def.Description;
//Strip off the [x], for example in Condition.onset[x].
result.SetPropertyPath(def.Path?.Select(p => p.Replace("[x]", "")).ToArray());
//Watch out: SearchParameter is not very good yet with Composite parameters.
//Therefore we include a reference to the original SearchParamDefinition :-)
result.SetOriginalDefinition(def);
return result;
}
