protected override void Context() { base.Context(); _parameter = A.Fake <IParameterDTO>(); _expressionParameterDTO = new ExpressionParameterDTO { Parameter = _parameter, GroupName = CoreConstants.Groups.VASCULAR_SYSTEM }; }
protected override void Context() { _view = A.Fake <IExpressionParametersView <ExpressionParameterDTO> >(); _editParameterTask = A.Fake <IEditParameterPresenterTask>(); sut = new ExpressionParametersPresenter(_view, _editParameterTask); _initialConcentration = createParameter(CoreConstants.Parameters.INITIAL_CONCENTRATION); _relativeExpression = createParameter(CoreConstants.Parameters.REL_EXP); _relativeExpression2 = createParameter(CoreConstants.Parameters.REL_EXP); _fraction_exp_bc = createParameter(CoreConstants.Parameters.FRACTION_EXPRESSED_BLOOD_CELLS); }
//Internal to allow for testing internal bool IsParameterVisible(ExpressionParameterDTO expressionParameterDTO) { var parameter = expressionParameterDTO.Parameter; //global surrogate parameters depending on settings if (string.Equals(expressionParameterDTO.GroupName, CoreConstants.Groups.VASCULAR_SYSTEM)) { switch (parameter.Name) { case REL_EXP_BLOOD_CELLS: return(_protein.InBloodCells); case FRACTION_EXPRESSED_BLOOD_CELLS: case FRACTION_EXPRESSED_BLOOD_CELLS_MEMBRANE: return(_protein.IsBloodCellsMembrane && _protein.IsBloodCellsIntracellular); case REL_EXP_VASCULAR_ENDOTHELIUM: return(_protein.InVascularEndothelium); case FRACTION_EXPRESSED_VASC_ENDO_ENDOSOME: return(_protein.IsVascEndosome && (_protein.IsVascMembraneTissueSide || _protein.IsVascMembranePlasmaSide)); case FRACTION_EXPRESSED_VASC_ENDO_TISSUE_SIDE: return(_protein.IsVascMembraneTissueSide && (_protein.IsVascEndosome || _protein.IsVascMembranePlasmaSide)); case FRACTION_EXPRESSED_VASC_ENDO_PLASMA_SIDE: return(_protein.IsVascMembranePlasmaSide && (_protein.IsVascEndosome || _protein.IsVascMembraneTissueSide)); } } //tissue location. Rel exp visible if we are expressing it switch (parameter.Name) { case REL_EXP: return(_protein.InTissue); case FRACTION_EXPRESSED_INTRACELLULAR: case FRACTION_EXPRESSED_INTERSTITIAL: return(_protein.IsIntracellular && _protein.IsInterstitial); } return(true); }
protected override void Context() { _view = A.Fake <IIndividualProteinExpressionsView>(); _individualProteinMapper = A.Fake <IIndividualProteinToIndividualProteinDTOMapper>(); _moleculesPropertiesPresenter = A.Fake <IIndividualMoleculePropertiesPresenter <Individual> >(); _expressionLocalizationPresenter = A.Fake <IExpressionLocalizationPresenter <Individual> >(); _expressionParametersPresenter = A.Fake <IExpressionParametersPresenter>(); sut = new IndividualEnzymeExpressionsPresenter <Individual>( _view, _individualProteinMapper, _moleculesPropertiesPresenter, _expressionLocalizationPresenter, _expressionParametersPresenter); _individual = new Individual(); sut.SimulationSubject = _individual; _enzyme = new IndividualEnzyme().WithName("CYP3A4"); _enzymeDTO = new IndividualProteinDTO(_enzyme); _initialConcentration = createParameter(INITIAL_CONCENTRATION); _relativeExpression = createParameter(REL_EXP); _relativeExpression2 = createParameter(REL_EXP); _fraction_exp_bc = createParameter(FRACTION_EXPRESSED_BLOOD_CELLS); _enzymeDTO.AddExpressionParameter(_initialConcentration); _enzymeDTO.AddExpressionParameter(_relativeExpression); _enzymeDTO.AddExpressionParameter(_fraction_exp_bc); A.CallTo(() => _individualProteinMapper.MapFrom(_enzyme, _individual)).Returns(_enzymeDTO); A.CallTo(() => _expressionParametersPresenter.Edit(A <IReadOnlyList <ExpressionParameterDTO> > ._)) .Invokes(x => _allParameters = x.GetArgument <IReadOnlyList <ExpressionParameterDTO> >(0).ToList()); sut.ActivateMolecule(_enzyme); }