/// <summary> /// Step 1: Building k-mers from sequence reads /// Step 2: Build de bruijn graph for input set of k-mers. /// Sets the _assemblerGraph field. /// </summary> protected void CreateGraph() { _graph = new DeBruijnGraph(); _graph.Build(_sequenceReads, _kmerLength); }
/// <summary> /// Step 1: Building k-mers from sequence reads /// Step 2: Build de bruijn graph for input set of k-mers. /// Sets the _assemblerGraph field. /// </summary> protected virtual void CreateGraph() { Graph = new DeBruijnGraph(this.kmerLength); Graph.Build(this.sequenceReads); }