public async Task Start()
{
_listenTask = Task.Run(() =>
{
_listener = _listener ?? new DICOMSCP(_entity);
_listener.SupportedAbstractSyntaxes = AbstractSyntax.ALL_RADIOTHERAPY_STORAGE;
_listener.DIMSEService.CStoreService.CStorePayloadAction = (dcm, asc) =>
{
if (!_tokenSource.Token.IsCancellationRequested)
{
var id = dcm.GetSelector().PatientID.Data;
string path = OrganizeByPatientId?
Path.Combine(_storagePath, id, dcm.GetSelector().SOPInstanceUID.Data + ".dcm"):
Path.Combine(_storagePath, dcm.GetSelector().SOPInstanceUID.Data + ".dcm");
var dir = Path.GetDirectoryName(path);
System.IO.Directory.CreateDirectory(dir);
dcm.Write(path);
return(true);
}
return(false);
};
_listener.ListenForIncomingAssociations(true);
}, _tokenSource.Token);
await _listenTask;
}
public void SendImage(ImageResult ir, DICOMSCP reciever)
{
AutoResetEvent ar = new AutoResetEvent(false);
var query = new CMoveIOD()
{
QueryLevel = QueryLevel.IMAGE,
PatientId = ir.PatientId,
SOPInstanceUID = ir.SopInstanceUid
};
if (ir.SeriesUid != null)
{
query.SeriesInstanceUID = ir.SeriesUid;
}
if (!reciever.IsListening)
{
reciever.ListenForIncomingAssociations(true);
}
ManualResetEvent mr = new ManualResetEvent(false);
var cr = new EvilDICOM.Network.Services.DIMSEService.DIMSEResponseHandler <CMoveResponse>((res, asc) =>
{
if (!(res.Status == (ushort)Status.PENDING))
{
mr.Set();
}
});
_scu.DIMSEService.CMoveResponseReceived += cr;
_scu.SendMessage(new CMoveRequest(query, reciever.ApplicationEntity.AeTitle), _scp);
mr.WaitOne();
_scu.DIMSEService.CMoveResponseReceived -= cr;
}
public static void Run()
{
//Store the details of the daemon (Ae Title, IP, port)
var daemon = new Entity("PHYSX_DICOM", "10.22.86.64", 51402);
//Store the details of the client (Ae Title, port) -> IP address is determined by CreateLocal() method
var local = Entity.CreateLocal("DICOMEC1", 9999);
//Set up a client (DICOM SCU = Service Class User)
var client = new DICOMSCU(local);
//Set up a receiver to catch the files as they come in
var receiver = new DICOMSCP(local);
//Let the daemon know we can take anything it sends
receiver.SupportedAbstractSyntaxes = AbstractSyntax.ALL_RADIOTHERAPY_STORAGE;
//Set up storage location
var desktopPath = Environment.GetFolderPath(Environment.SpecialFolder.Desktop);
var storagePath = Path.Combine(desktopPath, "DICOM Storage");
Directory.CreateDirectory(storagePath);
//Set the action when a DICOM files comes in
receiver.DIMSEService.CStoreService.CStorePayloadAction = (dcm, asc) =>
{
var path = Path.Combine(storagePath, dcm.GetSelector().SOPInstanceUID.Data + ".dcm");
Console.WriteLine($"Writing file {path}...");
dcm.Write(path);
return(true); // Lets daemom know if you successfully wrote to drive
};
receiver.ListenForIncomingAssociations(true);
//Build a finder class to help with C-FIND operations
var finder = client.GetCFinder(daemon);
var studies = finder.FindStudies("DA00001");
var series = finder.FindSeries(studies);
//Filter series by modality, then create list of
var plans = series.Where(s => s.Modality == "RTPLAN")
.SelectMany(ser => finder.FindImages(ser));
var doses = series.Where(s => s.Modality == "RTDOSE")
.SelectMany(ser => finder.FindImages(ser));
var cts = series.Where(s => s.Modality == "CT")
.SelectMany(ser => finder.FindImages(ser));
var mover = client.GetCMover(daemon);
ushort msgId = 1;
foreach (var plan in plans)
{
Console.WriteLine($"Sending plan {plan.SOPInstanceUID}...");
//Make sure Mobius is on the whitelist of the daemon
var response = mover.SendCMove(plan, local.AeTitle, ref msgId);
Console.WriteLine($"DICOM C-Move Results : ");
Console.WriteLine($"Number of Completed Operations : {response.NumberOfCompletedOps}");
Console.WriteLine($"Number of Failed Operations : {response.NumberOfFailedOps}");
Console.WriteLine($"Number of Remaining Operations : {response.NumberOfRemainingOps}");
Console.WriteLine($"Number of Warning Operations : {response.NumberOfWarningOps}");
}
Console.Read(); //Stop here
}
public static void Main(string[] args)
{
List <IDpair> idPairs = new List <IDpair>();
var IDlist = new List <string>();
if (args.Length == 1)
{
IDlist = args[0].Split(';').ToList();
}
else
{
throw new Exception("Wrong number of inputs");
}
// Split in pairs
foreach (string line in IDlist)
{
idPairs.Add(new IDpair(line));
}
// Create all required entities
//var me = new Entity("EvilDICOMC", "10.0.129.139", 50401);
//var me = Entity.CreateLocal("DCMGRBC", 51167);
var me = Entity.CreateLocal("DCMGRBer", 50400);
var scu = new DICOMSCU(me);
//var scp = new DICOMSCP
Entity reciever = new Entity(AEtitle, ipadress, port);
DICOMSCP scp = new DICOMSCP(reciever);
//var scpEntity = Entity.CreateLocal("EvilDICOM", 50400);
//var scpEntity = new Entity("EvilDICOM", "10.0.129.139", 50400);
//var scp = new FileWriterSCP(scpEntity, outPath);
//var scp = new DICOMSCP(scpEntity);
//scp.SupportedAbstractSyntaxes = AbstractSyntax.ALL_RADIOTHERAPY_STORAGE;
//scp.ListenForIncomingAssociations(true);
//var logger = new ConsoleLogger(scp.Logger, ConsoleColor.Red);
var qb = new QueryBuilder(scu, daemon);
ushort msgId = 1;
// Loop over ID pairs and pull files from ARIA OIS to finalPath
foreach (IDpair idPair in idPairs)
{
try
{
//qb.SendImage(new EvilDICOM.Network.DIMSE.IOD.CFindImageIOD() { PatientId = idPair.Id, SOPInstanceUID = idPair.Uid }, "EvilDICOM", ref msgId);
CFindImageIOD iod = new CFindImageIOD()
{
PatientId = idPair.Id, SOPInstanceUID = idPair.Uid
};
scu.SendCMoveImage(daemon, iod, scp.ApplicationEntity.AeTitle, ref msgId);
}
catch (Exception e)
{
Console.WriteLine(e.Message + "\n" + idPair.Uid);
}
}
}
static void Main(string[] args)
{
var scp = new DICOMSCP(Entity.CreateLocal("SCP", 9999));
new ConsoleLogger(scp.Logger);
scp.SupportedAbstractSyntaxes = AbstractSyntax.ALL_RADIOTHERAPY_STORAGE;
scp.DIMSEService.CStoreService.CStorePayloadAction = (dcm, asc) =>
{
return(true);
};
scp.ListenForIncomingAssociations(true);
Console.Read();
}
static void Main(string[] args)
{
var scp = new DICOMSCP(Entity.CreateLocal("SCP", 9999));
////new ConsoleLogger(scp.Logger);
//scp.SupportedAbstractSyntaxes = AbstractSyntax.ALL_RADIOTHERAPY_STORAGE;
//int i = 1;
//scp.DIMSEService.CStoreService.CStorePayloadAction = (dcm, asc) =>
//{
// Thread.Sleep(6000);
// Assert.AreEqual(dcm.SOPClass, SOPClass.CTImageStorage);
// Assert.AreEqual(dcm.PixelStream.Length, 10000);
// Assert.AreEqual(dcm.GetSelector().PatientID.Data, "123456");
// Console.WriteLine($"Received {i++} files");
// return true;
//};
//scp.ListenForIncomingAssociations(true);
var scu = new DICOMSCU(Entity.CreateLocal("SCU", 9998));
scu.IdleTimeout = 10000;
ushort msg = 1;
foreach (var dcm in GenerateDICOMFiles())
{
var resp = scu.GetCStorer(scp.ApplicationEntity).SendCStore(dcm, ref msg);
if (resp == null)
{
Console.WriteLine("SCU Timeout!");
break;
}
else if (resp.Status == (ushort)Status.FAILURE)
{
Console.WriteLine("No connection");
break;
}
}
Console.Read();
}
static int Execute(MainSettings settings)
{
// start by sending mail
sendMail.Program.send(settings.MAILTO, "MIQA_xBot initiated", "Export to MIQA will begin now.", settings.MAIL_USER, settings.MAIL_DOMAIN, settings.SMTP_SERVER);
List <CFindImageIOD> iods = new List <CFindImageIOD>();
Entity daemon = Entity.CreateLocal(settings.DBDAEMON_AETITLE, settings.DBDAEMON_PORT);
// define the local service class
var me = Entity.CreateLocal(settings.SCU_AETITLE, settings.SCU_PORT);
var scu = new DICOMSCU(me);
// define the query builder
var qb = new QueryBuilder(scu, daemon);
ushort msgId = 1;
// read the xml file
string xml = File.ReadAllText(settings.XporterPath);
Xports xPort = xml.ParseXML <Xports>();
// define the recievr
//Entity reciever = new Entity(xPort.Xporter.AEtitle, getIP(xPort.Xporter.ipstring), xPort.Xporter.port);
Entity reciever = new Entity(xPort.Xporter.AEtitle, xPort.Xporter.getIP(), xPort.Xporter.port);
DICOMSCP scp = new DICOMSCP(reciever);
// Query plan
DataTable plans = new DataTable();
if (!String.IsNullOrEmpty(xPort.Xporter.SQLstring))
{
SqlInterface.Connect(settings);
plans = xPort.Query(settings.LAG_DAYS);
SqlInterface.Disconnect();
}
// loop through plans
foreach (DataRow row in plans.Rows)
{
var patId = (string)row["PatientId"];
var planUID = (string)row["UID"];
iods.Add(new CFindImageIOD()
{
PatientId = patId, SOPInstanceUID = planUID
});
// loop through items and query based on type
foreach (string item in xPort.Xporter.include.ToList())
{
string itemSqlString = string.Empty;
switch (item)
{
case "planDose":
itemSqlString = "select distinct UID = DoseMatrix.DoseUID from DoseMatrix where DoseMatrix.PlanSetupSer = " + (Int64)row["PlanSer"];
break;
case "fieldDoses":
itemSqlString = "select distinct UID = DoseMatrix.DoseUID from DoseMatrix, Radiation where Radiation.PlanSetupSer = " + (Int64)row["PlanSer"] + " and DoseMatrix.RadiationSer = Radiation.RadiationSer";
break;
case "slices":
itemSqlString = "select UID=Slice.SliceUID from Slice, Image, StructureSet, PlanSetup where PlanSetup.PlanSetupSer=" + (Int64)row["PlanSer"] + " and StructureSet.StructureSetSer=PlanSetup.StructureSetSer and Image.ImageSer=StructureSet.ImageSer and Slice.SeriesSer=Image.SeriesSer";
break;
case "structures":
itemSqlString = "select UID=StructureSet.StructureSetUID from PlanSetup, StructureSet where PlanSetup.PlanSetupSer=" + (Int64)row["PlanSer"] + " and StructureSet.StructureSetSer=PlanSetup.StructureSetSer";
break;
case "images":
itemSqlString = "select UID=Slice.SliceUID from Slice, ImageSlice, Radiation where Radiation.PlanSetupSer = " + (Int64)row["PlanSer"] + " and ImageSlice.ImageSer = Radiation.RefImageSer and Slice.SliceSer = ImageSlice.SliceSer";
break;
case "records":
itemSqlString = "select UID=TreatmentRecord.TreatmentRecordUID from TreatmentRecord, RTPlan where RTPlan.PlanSetupSer= " + (Int64)row["PlanSer"] + " and TreatmentRecord.RTPlanSer=RTPlan.RTPlanSer";
break;
default:
itemSqlString = String.Empty;
break;
}
if (!String.IsNullOrEmpty(itemSqlString))
{
DataTable includeItem = SqlInterface.Query(itemSqlString);
foreach (DataRow itemRow in includeItem.Rows)
{
iods.Add(new CFindImageIOD()
{
PatientId = patId, SOPInstanceUID = (string)itemRow["UID"]
});
}
}
}
}
if (xPort.Xporter.active)
{
Console.WriteLine(iods.Count.ToString());
// Remove duplicate UIDs
if (!xPort.Xporter.allowDoublets)
{
iods = ListHandler.Unique(iods);
}
Console.WriteLine(iods.Count.ToString());
foreach (var iod in iods)
{
// Send it
scu.SendCMoveImage(daemon, iod, xPort.Xporter.AEtitle, ref msgId);
// We need this to pump messages in debugging
Console.WriteLine(iod.SOPInstanceUID.ToString());
}
}
// overwrite lastActivity
if (plans.Rows.Count > 0)
{
// Get last date encountered
DateTime lastPlan = (DateTime)plans.Rows[plans.Rows.Count - 1]["MAXDate"];
xPort.Xporter.lastActivity = lastPlan.ToString("yyyy-MM-dd");
// write xml
using (FileStream fs = new FileStream(settings.XporterPath, FileMode.Create))
{
XmlSerializer _xSer = new XmlSerializer(typeof(Xports));
_xSer.Serialize(fs, xPort);
}
}
if (xPort.Xporter.active)
{
return(plans.Rows.Count);
}
else
{
return(0);
}
}
static void Execute()
{
List <CFindImageIOD> iods = new List <CFindImageIOD>();
// define the DB Deamon entity
Entity daemon = Entity.CreateLocal(AEtitleDB, portDB);
// define the local service class
var me = Entity.CreateLocal("EvilDICOMC", 50400);
var scu = new DICOMSCU(me);
// define the query builder
var qb = new QueryBuilder(scu, daemon);
ushort msgId = 1;
// xml Deserialize
string xml = File.ReadAllText(Settings.xPorterPath);
var xport = xml.ParseXML <xports>();
// Define the reciever
Entity reciever = new Entity(xport.xporter.AEtitle, xport.xporter.ipstring, xport.xporter.port);
DICOMSCP scp = new DICOMSCP(reciever);
// Query plan
DataTable plans = new DataTable();
if (!String.IsNullOrEmpty(xport.xporter.SQLstring))
{
SqlInterface.Connect();
plans = xport.Query();
SqlInterface.Disconnect();
}
// loop through plans
foreach (DataRow row in plans.Rows)
{
var patId = ((string)row["PatientId"]);
// Remove special characters from patId
byte[] patIdBytes;
patIdBytes = Encoding.GetEncoding("ISO-8859-8").GetBytes(patId);
patId = Encoding.UTF8.GetString(patIdBytes);
var ImageUID = (string)row["ImageUID"];
var RefUID = (string)row["RefUID"];
double MU = (double)row["MU"];
iods.Add(new CFindImageIOD()
{
PatientId = patId, SOPInstanceUID = ImageUID
});
iods.Add(new CFindImageIOD()
{
PatientId = patId, SOPInstanceUID = RefUID
});
if (xport.xporter.active)
{
// Generate linking text file
string[] content = { ImageUID, RefUID, MU.ToString(), Settings.DoseCrit, Settings.DistCrit, Settings.DoseThreshold, Settings.LocalDose, Settings.AcceptCrit };
File.WriteAllLines(ImageUID + ".dat", content);
// SFTP it
SFTP.Send(ImageUID + ".dat");
// Delte file
File.Delete(ImageUID + ".dat");
}
}
// change lastActivity
if (plans.Rows.Count > 0)
{
DateTime lastPlan = (DateTime)plans.Rows[plans.Rows.Count - 1]["DateTime"];
xport.xporter.lastActivity = lastPlan.ToString("yyyy-MM-dd HH:mm:ss.fff");
// write xml
using (FileStream fs = new FileStream(Settings.xPorterPath, FileMode.Create))
{
XmlSerializer _xSer = new XmlSerializer(typeof(xports));
_xSer.Serialize(fs, xport);
}
}
// if active send
if (xport.xporter.active)
{
Console.WriteLine(iods.Count.ToString());
// Remove duplicate UIDs
if (!xport.xporter.allowDoublets)
{
iods = ListHandler.Unique(iods);
}
Console.WriteLine(iods.Count.ToString());
foreach (var iod in iods)
{
// Send it
scu.SendCMoveImage(daemon, iod, xport.xporter.AEtitle, ref msgId);
// Add logging
// verify file recieved
var recieved = SFTP.Verify("RI." + iod.SOPInstanceUID + ".dcm");
if (!recieved)
{
throw new FileNotFoundException("CMove Operation not verified.");
}
}
}
}
public void SendImage(ImageResult ir, DICOMSCP reciever)
{
AutoResetEvent ar = new AutoResetEvent(false);
var query = new CMoveIOD()
{
QueryLevel = QueryLevel.IMAGE,
PatientId = ir.PatientId,
SOPInstanceUID = ir.SopInstanceUid
};
if (ir.SeriesUid != null) { query.SeriesInstanceUID = ir.SeriesUid; }
if (!reciever.IsListening) { reciever.ListenForIncomingAssociations(true); }
ManualResetEvent mr = new ManualResetEvent(false);
var cr = new EvilDICOM.Network.Services.DIMSEService.DIMSEResponseHandler<CMoveResponse>((res, asc) =>
{
if (!(res.Status == (ushort)Status.PENDING))
{
mr.Set();
}
});
_scu.DIMSEService.CMoveResponseReceived += cr;
_scu.SendMessage(new CMoveRequest(query, reciever.ApplicationEntity.AeTitle), _scp);
mr.WaitOne();
_scu.DIMSEService.CMoveResponseReceived -= cr;
}
protected override void OnStartup(StartupEventArgs e)
{
// Store the details of the daemon (Ae Title , IP , port )
var daemon = new Entity("VMSDBD1", "192.168.1.11", 5678);
// Store the details of the client (Ae Title , port ) -> IP address is determined by CreateLocal() method
var local = Entity.CreateLocal("DICOMEC1", 5681);
// Set up a client ( DICOM SCU = Service Class User )
var client = new DICOMSCU(local);
// Set up a receiver to catch the files as they come in
var receiver = new DICOMSCP(local);
// Let the daemon know we can take anything it sends
receiver.SupportedAbstractSyntaxes = AbstractSyntax.ALL_RADIOTHERAPY_STORAGE;
// Set up storage location
var desktopPath = Environment.GetFolderPath(Environment.SpecialFolder.Desktop);
var storagePath = Path.Combine(desktopPath, "DICOM Storage");
Directory.CreateDirectory(storagePath);
// Set the action when a DICOM files comes in
receiver.DIMSEService.CStoreService.CStorePayloadAction = (dcm, asc) =>
{
var path = Path.Combine(storagePath, dcm.GetSelector().
SOPInstanceUID.Data + ".dcm");
Console.WriteLine($"Writing file { path }... ");
dcm.Write(path);
return(true);
};
receiver.ListenForIncomingAssociations(true);
// Build a finder class to help with C- FIND operations
var finder = client.GetCFinder(daemon);
var studies = finder.FindStudies("US-EC-020");
var series = finder.FindSeries(studies);
// Filter series by modality , then create list of
//we're not finding any studies - why?
var plans = series.Where(s => s.Modality == "RTPLAN").SelectMany(ser => finder.FindImages(ser));
var doses = series.Where(s => s.Modality == "RTDOSE").SelectMany(ser => finder.FindImages(ser));
var cts = series.Where(s => s.Modality == "CT").SelectMany(ser => finder.FindImages(ser));
var mover = client.GetCMover(daemon);
ushort msgId = 1;
foreach (var plan in plans)
{
Console.WriteLine($"Sending plan { plan.SOPInstanceUID }... ");
// Make sure Mobius is on the whitelist of the daemon
var response = mover.SendCMove(plan, local.AeTitle, ref msgId);
Console.WriteLine($"DICOM CMove Results: ");
Console.WriteLine($"Number of Completed Operations: { response.NumberOfCompletedOps }");
Console.WriteLine($"Number of Failed Operations: { response.NumberOfFailedOps }");
Console.WriteLine($"Number of Remaining Operations: { response.NumberOfRemainingOps}");
Console.WriteLine($"Number of Warning Operations: { response.NumberOfWarningOps}");
}
Console.Read();
// Stop here
//var myEntity = new Entity("VMSDBD1","192.168.1.11",5678);
//var scp = new DICOMSCP(myEntity);
//scp.ListenForIncomingAssociations(keepListenerRunning: true);
//var en1 = Entity.CreateLocal("EvilDICOM", "666");
//var scu = new DICOMSCU(en1);
////USING EVILDICOM
////var localEntity = new Entity("DCMTK")
//var daemon = new Entity("VarianDaemon", "192.168.1.11", 5678);
////var client = new DICOMSCP();
//var client = new DICOMSCU(Entity.CreateLocal("MyEntity", 9999));
//var finder = client.GetCFinder(daemon);
//var studies = finder.FindStudies("PATIENTID");
//var series = finder.FindSeries(studies);
////var series = finder.FindSeries(studies).Where(s=>s.Modality=="REG");
//var mover = client.GetCMover(daemon);
//mover.SendCMove(series.First(),daemon.AeTitle)
//var records = finder.FindRTRecords(series);
//ecords.First().TreatmentDate
//UNCOMMENT FOR OUR EXAMPLE PLANCHECKER
//string[] args = e.Args;
//base.OnStartup(e);
//var bs = new AppBootstrapper<MainView>(() => { return VMS.TPS.Common.Model.API.Application.CreateApplication(); });
////You can use the following to load a context (for debugging purposes)
////args = ContextIO.ReadArgsFromFile(@"C: \Users\cwalker\Desktop\context.txt");
////Might disable (uncomment) for plugin mode
//bs.IsPatientSelectionEnabled = false;
//bs.Run(args);
}
