public async Task Start() { _listenTask = Task.Run(() => { _listener = _listener ?? new DICOMSCP(_entity); _listener.SupportedAbstractSyntaxes = AbstractSyntax.ALL_RADIOTHERAPY_STORAGE; _listener.DIMSEService.CStoreService.CStorePayloadAction = (dcm, asc) => { if (!_tokenSource.Token.IsCancellationRequested) { var id = dcm.GetSelector().PatientID.Data; string path = OrganizeByPatientId? Path.Combine(_storagePath, id, dcm.GetSelector().SOPInstanceUID.Data + ".dcm"): Path.Combine(_storagePath, dcm.GetSelector().SOPInstanceUID.Data + ".dcm"); var dir = Path.GetDirectoryName(path); System.IO.Directory.CreateDirectory(dir); dcm.Write(path); return(true); } return(false); }; _listener.ListenForIncomingAssociations(true); }, _tokenSource.Token); await _listenTask; }
public void SendImage(ImageResult ir, DICOMSCP reciever) { AutoResetEvent ar = new AutoResetEvent(false); var query = new CMoveIOD() { QueryLevel = QueryLevel.IMAGE, PatientId = ir.PatientId, SOPInstanceUID = ir.SopInstanceUid }; if (ir.SeriesUid != null) { query.SeriesInstanceUID = ir.SeriesUid; } if (!reciever.IsListening) { reciever.ListenForIncomingAssociations(true); } ManualResetEvent mr = new ManualResetEvent(false); var cr = new EvilDICOM.Network.Services.DIMSEService.DIMSEResponseHandler <CMoveResponse>((res, asc) => { if (!(res.Status == (ushort)Status.PENDING)) { mr.Set(); } }); _scu.DIMSEService.CMoveResponseReceived += cr; _scu.SendMessage(new CMoveRequest(query, reciever.ApplicationEntity.AeTitle), _scp); mr.WaitOne(); _scu.DIMSEService.CMoveResponseReceived -= cr; }
public static void Run() { //Store the details of the daemon (Ae Title, IP, port) var daemon = new Entity("PHYSX_DICOM", "10.22.86.64", 51402); //Store the details of the client (Ae Title, port) -> IP address is determined by CreateLocal() method var local = Entity.CreateLocal("DICOMEC1", 9999); //Set up a client (DICOM SCU = Service Class User) var client = new DICOMSCU(local); //Set up a receiver to catch the files as they come in var receiver = new DICOMSCP(local); //Let the daemon know we can take anything it sends receiver.SupportedAbstractSyntaxes = AbstractSyntax.ALL_RADIOTHERAPY_STORAGE; //Set up storage location var desktopPath = Environment.GetFolderPath(Environment.SpecialFolder.Desktop); var storagePath = Path.Combine(desktopPath, "DICOM Storage"); Directory.CreateDirectory(storagePath); //Set the action when a DICOM files comes in receiver.DIMSEService.CStoreService.CStorePayloadAction = (dcm, asc) => { var path = Path.Combine(storagePath, dcm.GetSelector().SOPInstanceUID.Data + ".dcm"); Console.WriteLine($"Writing file {path}..."); dcm.Write(path); return(true); // Lets daemom know if you successfully wrote to drive }; receiver.ListenForIncomingAssociations(true); //Build a finder class to help with C-FIND operations var finder = client.GetCFinder(daemon); var studies = finder.FindStudies("DA00001"); var series = finder.FindSeries(studies); //Filter series by modality, then create list of var plans = series.Where(s => s.Modality == "RTPLAN") .SelectMany(ser => finder.FindImages(ser)); var doses = series.Where(s => s.Modality == "RTDOSE") .SelectMany(ser => finder.FindImages(ser)); var cts = series.Where(s => s.Modality == "CT") .SelectMany(ser => finder.FindImages(ser)); var mover = client.GetCMover(daemon); ushort msgId = 1; foreach (var plan in plans) { Console.WriteLine($"Sending plan {plan.SOPInstanceUID}..."); //Make sure Mobius is on the whitelist of the daemon var response = mover.SendCMove(plan, local.AeTitle, ref msgId); Console.WriteLine($"DICOM C-Move Results : "); Console.WriteLine($"Number of Completed Operations : {response.NumberOfCompletedOps}"); Console.WriteLine($"Number of Failed Operations : {response.NumberOfFailedOps}"); Console.WriteLine($"Number of Remaining Operations : {response.NumberOfRemainingOps}"); Console.WriteLine($"Number of Warning Operations : {response.NumberOfWarningOps}"); } Console.Read(); //Stop here }
public static void Main(string[] args) { List <IDpair> idPairs = new List <IDpair>(); var IDlist = new List <string>(); if (args.Length == 1) { IDlist = args[0].Split(';').ToList(); } else { throw new Exception("Wrong number of inputs"); } // Split in pairs foreach (string line in IDlist) { idPairs.Add(new IDpair(line)); } // Create all required entities //var me = new Entity("EvilDICOMC", "10.0.129.139", 50401); //var me = Entity.CreateLocal("DCMGRBC", 51167); var me = Entity.CreateLocal("DCMGRBer", 50400); var scu = new DICOMSCU(me); //var scp = new DICOMSCP Entity reciever = new Entity(AEtitle, ipadress, port); DICOMSCP scp = new DICOMSCP(reciever); //var scpEntity = Entity.CreateLocal("EvilDICOM", 50400); //var scpEntity = new Entity("EvilDICOM", "10.0.129.139", 50400); //var scp = new FileWriterSCP(scpEntity, outPath); //var scp = new DICOMSCP(scpEntity); //scp.SupportedAbstractSyntaxes = AbstractSyntax.ALL_RADIOTHERAPY_STORAGE; //scp.ListenForIncomingAssociations(true); //var logger = new ConsoleLogger(scp.Logger, ConsoleColor.Red); var qb = new QueryBuilder(scu, daemon); ushort msgId = 1; // Loop over ID pairs and pull files from ARIA OIS to finalPath foreach (IDpair idPair in idPairs) { try { //qb.SendImage(new EvilDICOM.Network.DIMSE.IOD.CFindImageIOD() { PatientId = idPair.Id, SOPInstanceUID = idPair.Uid }, "EvilDICOM", ref msgId); CFindImageIOD iod = new CFindImageIOD() { PatientId = idPair.Id, SOPInstanceUID = idPair.Uid }; scu.SendCMoveImage(daemon, iod, scp.ApplicationEntity.AeTitle, ref msgId); } catch (Exception e) { Console.WriteLine(e.Message + "\n" + idPair.Uid); } } }
static void Main(string[] args) { var scp = new DICOMSCP(Entity.CreateLocal("SCP", 9999)); new ConsoleLogger(scp.Logger); scp.SupportedAbstractSyntaxes = AbstractSyntax.ALL_RADIOTHERAPY_STORAGE; scp.DIMSEService.CStoreService.CStorePayloadAction = (dcm, asc) => { return(true); }; scp.ListenForIncomingAssociations(true); Console.Read(); }
static void Main(string[] args) { var scp = new DICOMSCP(Entity.CreateLocal("SCP", 9999)); ////new ConsoleLogger(scp.Logger); //scp.SupportedAbstractSyntaxes = AbstractSyntax.ALL_RADIOTHERAPY_STORAGE; //int i = 1; //scp.DIMSEService.CStoreService.CStorePayloadAction = (dcm, asc) => //{ // Thread.Sleep(6000); // Assert.AreEqual(dcm.SOPClass, SOPClass.CTImageStorage); // Assert.AreEqual(dcm.PixelStream.Length, 10000); // Assert.AreEqual(dcm.GetSelector().PatientID.Data, "123456"); // Console.WriteLine($"Received {i++} files"); // return true; //}; //scp.ListenForIncomingAssociations(true); var scu = new DICOMSCU(Entity.CreateLocal("SCU", 9998)); scu.IdleTimeout = 10000; ushort msg = 1; foreach (var dcm in GenerateDICOMFiles()) { var resp = scu.GetCStorer(scp.ApplicationEntity).SendCStore(dcm, ref msg); if (resp == null) { Console.WriteLine("SCU Timeout!"); break; } else if (resp.Status == (ushort)Status.FAILURE) { Console.WriteLine("No connection"); break; } } Console.Read(); }
static int Execute(MainSettings settings) { // start by sending mail sendMail.Program.send(settings.MAILTO, "MIQA_xBot initiated", "Export to MIQA will begin now.", settings.MAIL_USER, settings.MAIL_DOMAIN, settings.SMTP_SERVER); List <CFindImageIOD> iods = new List <CFindImageIOD>(); Entity daemon = Entity.CreateLocal(settings.DBDAEMON_AETITLE, settings.DBDAEMON_PORT); // define the local service class var me = Entity.CreateLocal(settings.SCU_AETITLE, settings.SCU_PORT); var scu = new DICOMSCU(me); // define the query builder var qb = new QueryBuilder(scu, daemon); ushort msgId = 1; // read the xml file string xml = File.ReadAllText(settings.XporterPath); Xports xPort = xml.ParseXML <Xports>(); // define the recievr //Entity reciever = new Entity(xPort.Xporter.AEtitle, getIP(xPort.Xporter.ipstring), xPort.Xporter.port); Entity reciever = new Entity(xPort.Xporter.AEtitle, xPort.Xporter.getIP(), xPort.Xporter.port); DICOMSCP scp = new DICOMSCP(reciever); // Query plan DataTable plans = new DataTable(); if (!String.IsNullOrEmpty(xPort.Xporter.SQLstring)) { SqlInterface.Connect(settings); plans = xPort.Query(settings.LAG_DAYS); SqlInterface.Disconnect(); } // loop through plans foreach (DataRow row in plans.Rows) { var patId = (string)row["PatientId"]; var planUID = (string)row["UID"]; iods.Add(new CFindImageIOD() { PatientId = patId, SOPInstanceUID = planUID }); // loop through items and query based on type foreach (string item in xPort.Xporter.include.ToList()) { string itemSqlString = string.Empty; switch (item) { case "planDose": itemSqlString = "select distinct UID = DoseMatrix.DoseUID from DoseMatrix where DoseMatrix.PlanSetupSer = " + (Int64)row["PlanSer"]; break; case "fieldDoses": itemSqlString = "select distinct UID = DoseMatrix.DoseUID from DoseMatrix, Radiation where Radiation.PlanSetupSer = " + (Int64)row["PlanSer"] + " and DoseMatrix.RadiationSer = Radiation.RadiationSer"; break; case "slices": itemSqlString = "select UID=Slice.SliceUID from Slice, Image, StructureSet, PlanSetup where PlanSetup.PlanSetupSer=" + (Int64)row["PlanSer"] + " and StructureSet.StructureSetSer=PlanSetup.StructureSetSer and Image.ImageSer=StructureSet.ImageSer and Slice.SeriesSer=Image.SeriesSer"; break; case "structures": itemSqlString = "select UID=StructureSet.StructureSetUID from PlanSetup, StructureSet where PlanSetup.PlanSetupSer=" + (Int64)row["PlanSer"] + " and StructureSet.StructureSetSer=PlanSetup.StructureSetSer"; break; case "images": itemSqlString = "select UID=Slice.SliceUID from Slice, ImageSlice, Radiation where Radiation.PlanSetupSer = " + (Int64)row["PlanSer"] + " and ImageSlice.ImageSer = Radiation.RefImageSer and Slice.SliceSer = ImageSlice.SliceSer"; break; case "records": itemSqlString = "select UID=TreatmentRecord.TreatmentRecordUID from TreatmentRecord, RTPlan where RTPlan.PlanSetupSer= " + (Int64)row["PlanSer"] + " and TreatmentRecord.RTPlanSer=RTPlan.RTPlanSer"; break; default: itemSqlString = String.Empty; break; } if (!String.IsNullOrEmpty(itemSqlString)) { DataTable includeItem = SqlInterface.Query(itemSqlString); foreach (DataRow itemRow in includeItem.Rows) { iods.Add(new CFindImageIOD() { PatientId = patId, SOPInstanceUID = (string)itemRow["UID"] }); } } } } if (xPort.Xporter.active) { Console.WriteLine(iods.Count.ToString()); // Remove duplicate UIDs if (!xPort.Xporter.allowDoublets) { iods = ListHandler.Unique(iods); } Console.WriteLine(iods.Count.ToString()); foreach (var iod in iods) { // Send it scu.SendCMoveImage(daemon, iod, xPort.Xporter.AEtitle, ref msgId); // We need this to pump messages in debugging Console.WriteLine(iod.SOPInstanceUID.ToString()); } } // overwrite lastActivity if (plans.Rows.Count > 0) { // Get last date encountered DateTime lastPlan = (DateTime)plans.Rows[plans.Rows.Count - 1]["MAXDate"]; xPort.Xporter.lastActivity = lastPlan.ToString("yyyy-MM-dd"); // write xml using (FileStream fs = new FileStream(settings.XporterPath, FileMode.Create)) { XmlSerializer _xSer = new XmlSerializer(typeof(Xports)); _xSer.Serialize(fs, xPort); } } if (xPort.Xporter.active) { return(plans.Rows.Count); } else { return(0); } }
static void Execute() { List <CFindImageIOD> iods = new List <CFindImageIOD>(); // define the DB Deamon entity Entity daemon = Entity.CreateLocal(AEtitleDB, portDB); // define the local service class var me = Entity.CreateLocal("EvilDICOMC", 50400); var scu = new DICOMSCU(me); // define the query builder var qb = new QueryBuilder(scu, daemon); ushort msgId = 1; // xml Deserialize string xml = File.ReadAllText(Settings.xPorterPath); var xport = xml.ParseXML <xports>(); // Define the reciever Entity reciever = new Entity(xport.xporter.AEtitle, xport.xporter.ipstring, xport.xporter.port); DICOMSCP scp = new DICOMSCP(reciever); // Query plan DataTable plans = new DataTable(); if (!String.IsNullOrEmpty(xport.xporter.SQLstring)) { SqlInterface.Connect(); plans = xport.Query(); SqlInterface.Disconnect(); } // loop through plans foreach (DataRow row in plans.Rows) { var patId = ((string)row["PatientId"]); // Remove special characters from patId byte[] patIdBytes; patIdBytes = Encoding.GetEncoding("ISO-8859-8").GetBytes(patId); patId = Encoding.UTF8.GetString(patIdBytes); var ImageUID = (string)row["ImageUID"]; var RefUID = (string)row["RefUID"]; double MU = (double)row["MU"]; iods.Add(new CFindImageIOD() { PatientId = patId, SOPInstanceUID = ImageUID }); iods.Add(new CFindImageIOD() { PatientId = patId, SOPInstanceUID = RefUID }); if (xport.xporter.active) { // Generate linking text file string[] content = { ImageUID, RefUID, MU.ToString(), Settings.DoseCrit, Settings.DistCrit, Settings.DoseThreshold, Settings.LocalDose, Settings.AcceptCrit }; File.WriteAllLines(ImageUID + ".dat", content); // SFTP it SFTP.Send(ImageUID + ".dat"); // Delte file File.Delete(ImageUID + ".dat"); } } // change lastActivity if (plans.Rows.Count > 0) { DateTime lastPlan = (DateTime)plans.Rows[plans.Rows.Count - 1]["DateTime"]; xport.xporter.lastActivity = lastPlan.ToString("yyyy-MM-dd HH:mm:ss.fff"); // write xml using (FileStream fs = new FileStream(Settings.xPorterPath, FileMode.Create)) { XmlSerializer _xSer = new XmlSerializer(typeof(xports)); _xSer.Serialize(fs, xport); } } // if active send if (xport.xporter.active) { Console.WriteLine(iods.Count.ToString()); // Remove duplicate UIDs if (!xport.xporter.allowDoublets) { iods = ListHandler.Unique(iods); } Console.WriteLine(iods.Count.ToString()); foreach (var iod in iods) { // Send it scu.SendCMoveImage(daemon, iod, xport.xporter.AEtitle, ref msgId); // Add logging // verify file recieved var recieved = SFTP.Verify("RI." + iod.SOPInstanceUID + ".dcm"); if (!recieved) { throw new FileNotFoundException("CMove Operation not verified."); } } } }
public void SendImage(ImageResult ir, DICOMSCP reciever) { AutoResetEvent ar = new AutoResetEvent(false); var query = new CMoveIOD() { QueryLevel = QueryLevel.IMAGE, PatientId = ir.PatientId, SOPInstanceUID = ir.SopInstanceUid }; if (ir.SeriesUid != null) { query.SeriesInstanceUID = ir.SeriesUid; } if (!reciever.IsListening) { reciever.ListenForIncomingAssociations(true); } ManualResetEvent mr = new ManualResetEvent(false); var cr = new EvilDICOM.Network.Services.DIMSEService.DIMSEResponseHandler<CMoveResponse>((res, asc) => { if (!(res.Status == (ushort)Status.PENDING)) { mr.Set(); } }); _scu.DIMSEService.CMoveResponseReceived += cr; _scu.SendMessage(new CMoveRequest(query, reciever.ApplicationEntity.AeTitle), _scp); mr.WaitOne(); _scu.DIMSEService.CMoveResponseReceived -= cr; }
protected override void OnStartup(StartupEventArgs e) { // Store the details of the daemon (Ae Title , IP , port ) var daemon = new Entity("VMSDBD1", "192.168.1.11", 5678); // Store the details of the client (Ae Title , port ) -> IP address is determined by CreateLocal() method var local = Entity.CreateLocal("DICOMEC1", 5681); // Set up a client ( DICOM SCU = Service Class User ) var client = new DICOMSCU(local); // Set up a receiver to catch the files as they come in var receiver = new DICOMSCP(local); // Let the daemon know we can take anything it sends receiver.SupportedAbstractSyntaxes = AbstractSyntax.ALL_RADIOTHERAPY_STORAGE; // Set up storage location var desktopPath = Environment.GetFolderPath(Environment.SpecialFolder.Desktop); var storagePath = Path.Combine(desktopPath, "DICOM Storage"); Directory.CreateDirectory(storagePath); // Set the action when a DICOM files comes in receiver.DIMSEService.CStoreService.CStorePayloadAction = (dcm, asc) => { var path = Path.Combine(storagePath, dcm.GetSelector(). SOPInstanceUID.Data + ".dcm"); Console.WriteLine($"Writing file { path }... "); dcm.Write(path); return(true); }; receiver.ListenForIncomingAssociations(true); // Build a finder class to help with C- FIND operations var finder = client.GetCFinder(daemon); var studies = finder.FindStudies("US-EC-020"); var series = finder.FindSeries(studies); // Filter series by modality , then create list of //we're not finding any studies - why? var plans = series.Where(s => s.Modality == "RTPLAN").SelectMany(ser => finder.FindImages(ser)); var doses = series.Where(s => s.Modality == "RTDOSE").SelectMany(ser => finder.FindImages(ser)); var cts = series.Where(s => s.Modality == "CT").SelectMany(ser => finder.FindImages(ser)); var mover = client.GetCMover(daemon); ushort msgId = 1; foreach (var plan in plans) { Console.WriteLine($"Sending plan { plan.SOPInstanceUID }... "); // Make sure Mobius is on the whitelist of the daemon var response = mover.SendCMove(plan, local.AeTitle, ref msgId); Console.WriteLine($"DICOM CMove Results: "); Console.WriteLine($"Number of Completed Operations: { response.NumberOfCompletedOps }"); Console.WriteLine($"Number of Failed Operations: { response.NumberOfFailedOps }"); Console.WriteLine($"Number of Remaining Operations: { response.NumberOfRemainingOps}"); Console.WriteLine($"Number of Warning Operations: { response.NumberOfWarningOps}"); } Console.Read(); // Stop here //var myEntity = new Entity("VMSDBD1","192.168.1.11",5678); //var scp = new DICOMSCP(myEntity); //scp.ListenForIncomingAssociations(keepListenerRunning: true); //var en1 = Entity.CreateLocal("EvilDICOM", "666"); //var scu = new DICOMSCU(en1); ////USING EVILDICOM ////var localEntity = new Entity("DCMTK") //var daemon = new Entity("VarianDaemon", "192.168.1.11", 5678); ////var client = new DICOMSCP(); //var client = new DICOMSCU(Entity.CreateLocal("MyEntity", 9999)); //var finder = client.GetCFinder(daemon); //var studies = finder.FindStudies("PATIENTID"); //var series = finder.FindSeries(studies); ////var series = finder.FindSeries(studies).Where(s=>s.Modality=="REG"); //var mover = client.GetCMover(daemon); //mover.SendCMove(series.First(),daemon.AeTitle) //var records = finder.FindRTRecords(series); //ecords.First().TreatmentDate //UNCOMMENT FOR OUR EXAMPLE PLANCHECKER //string[] args = e.Args; //base.OnStartup(e); //var bs = new AppBootstrapper<MainView>(() => { return VMS.TPS.Common.Model.API.Application.CreateApplication(); }); ////You can use the following to load a context (for debugging purposes) ////args = ContextIO.ReadArgsFromFile(@"C: \Users\cwalker\Desktop\context.txt"); ////Might disable (uncomment) for plugin mode //bs.IsPatientSelectionEnabled = false; //bs.Run(args); }