public override Audit.Model.AuditResult IsOkToAccept(AccessionOrder accessionOrder) { Audit.Model.AuditResult result = base.IsOkToAccept(accessionOrder); if (result.Status == Audit.Model.AuditStatusEnum.OK) { if (string.IsNullOrEmpty(this.Result) == true) { result.Status = Audit.Model.AuditStatusEnum.Failure; result.Message = UnableToAccept; } } if (result.Status == Audit.Model.AuditStatusEnum.OK) { if (string.IsNullOrEmpty(this.m_TumorNucleiPercentage) == true) { result.Status = Audit.Model.AuditStatusEnum.Failure; result.Message = "The results cannot be accepted because the Tumor Nuclei Percentage has no value."; } } if (result.Status == Audit.Model.AuditStatusEnum.OK) { this.DoesFinalSummaryResultMatch(accessionOrder, this.m_Result, result); if (result.Status == Audit.Model.AuditStatusEnum.Warning) { result.Message += AskAccept; } } return(result); }
private void AreTestResultsPresent(AccessionOrder accessionOrder, Audit.Model.AuditResult result) { if (string.IsNullOrEmpty(this.m_JAK2V617FResult) == true) { result.Status = Audit.Model.AuditStatusEnum.Failure; result.Message += NotFilledMessage("JAK2V617FResult"); } if (string.IsNullOrEmpty(this.m_JAK2Exon1214Result) == true) { result.Status = Audit.Model.AuditStatusEnum.Failure; result.Message += NotFilledMessage("JAK2Exon1214Result"); } if (string.IsNullOrEmpty(this.m_MPLResult) == true) { result.Status = Audit.Model.AuditStatusEnum.Failure; result.Message += NotFilledMessage("MPLResult"); } if (string.IsNullOrEmpty(this.m_CalreticulinMutationAnalysisResult) == true) { result.Status = Audit.Model.AuditStatusEnum.Failure; result.Message += NotFilledMessage("CalreticulinMutationAnalysisResult"); } }
public override YellowstonePathology.Business.Audit.Model.AuditResult IsOkToFinalize(Test.AccessionOrder accessionOrder) { Audit.Model.AuditResult auditResult = base.IsOkToFinalize(accessionOrder); if (auditResult.Status == Audit.Model.AuditStatusEnum.OK) { if (string.IsNullOrEmpty(this.m_ResultCode) == true) { auditResult.Status = Audit.Model.AuditStatusEnum.Failure; auditResult.Message = "This case cannot be finalized because the results have not been set."; } else { YellowstonePathology.Business.Test.KRASStandardReflex.KRASStandardReflexTest krasStandardReflexTest = new KRASStandardReflex.KRASStandardReflexTest(); if (accessionOrder.PanelSetOrderCollection.Exists(krasStandardReflexTest.PanelSetId, this.OrderedOnId, true) == false) { YellowstonePathology.Business.Facility.Model.Facility ypi = YellowstonePathology.Business.Facility.Model.FacilityCollection.Instance.GetByFacilityId("YPIBLGS"); if (this.TechnicalComponentFacilityId == ypi.FacilityId) { if (string.IsNullOrEmpty(this.TumorNucleiPercentage) == true) { if (accessionOrder.PanelSetOrderCollection.Exists(krasStandardReflexTest.PanelSetId) == false) { auditResult.Status = Audit.Model.AuditStatusEnum.Failure; auditResult.Message = "This case cannot be finalized because the Tumor Nuclei Percent is not set."; } } } } } } return(auditResult); }
public override YellowstonePathology.Business.Audit.Model.AuditResult IsOkToFinalize(Test.AccessionOrder accessionOrder) { Audit.Model.AuditResult result = base.IsOkToFinalize(accessionOrder); if (result.Status == Audit.Model.AuditStatusEnum.OK) { if (string.IsNullOrEmpty(this.m_Result) == true) { result.Status = Audit.Model.AuditStatusEnum.Failure; result.Message = UnableToFinal; } } if (result.Status == Audit.Model.AuditStatusEnum.OK) { if (string.IsNullOrEmpty(this.m_TumorNucleiPercentage) == true) { result.Status = Audit.Model.AuditStatusEnum.Failure; result.Message = "The results cannot be finalized because the Tumor Nuclei Percentage has no value."; } } if (result.Status == Audit.Model.AuditStatusEnum.OK) { this.DoesFinalSummaryResultMatch(accessionOrder, this.m_Result, result); if (result.Status == Audit.Model.AuditStatusEnum.Warning) { result.Message += AskFinal; } } return(result); }
public override Audit.Model.AuditResult IsOkToAccept(AccessionOrder accessionOrder) { Audit.Model.AuditResult result = base.IsOkToAccept(accessionOrder); if (result.Status == Audit.Model.AuditStatusEnum.OK) { if (string.IsNullOrEmpty(this.TumorNucleiPercentage) == true) { result.Status = Audit.Model.AuditStatusEnum.Failure; result.Message = "The results cannot be accepted because the Tumor Nuclei Percentage has no value."; } } if (result.Status == Audit.Model.AuditStatusEnum.OK) { this.AreComponentTestOrdersAccepted(accessionOrder, result); } if (result.Status == Audit.Model.AuditStatusEnum.OK) { this.AreTestResultsPresent(accessionOrder, result); } if (result.Status == Audit.Model.AuditStatusEnum.OK) { this.DoComponentTestResultsMatchPreviousResults(accessionOrder, this, result); if (result.Status == Audit.Model.AuditStatusEnum.Warning) { result.Message += AskAccept; } } return(result); }
public override YellowstonePathology.Business.Audit.Model.AuditResult IsOkToFinalize(Test.AccessionOrder accessionOrder) { Audit.Model.AuditResult result = base.IsOkToFinalize(accessionOrder); if (result.Status == Audit.Model.AuditStatusEnum.OK) { if (string.IsNullOrEmpty(this.TumorNucleiPercentage) == true) { result.Status = Audit.Model.AuditStatusEnum.Failure; result.Message = "The results cannot be finalized because the Tumor Nuclei Percentage has no value."; } } if (result.Status == Audit.Model.AuditStatusEnum.OK) { this.AreComponentTestOrdersFinal(accessionOrder, result); } if (result.Status == Audit.Model.AuditStatusEnum.OK) { this.AreTestResultsPresent(accessionOrder, result); } if (result.Status == Audit.Model.AuditStatusEnum.OK) { this.DoComponentTestResultsMatchPreviousResults(accessionOrder, this, result); if (result.Status == Audit.Model.AuditStatusEnum.Warning) { result.Message += AskFinal; } } return(result); }
public void DoesPDL1SP142ResultMatch(string result, Audit.Model.AuditResult auditResult) { if (this.Final == true && this.m_PDL1SP142Result != result) { auditResult.Status = Audit.Model.AuditStatusEnum.Warning; auditResult.Message += MismatchMessage(this.PanelSetName); } }
public override YellowstonePathology.Business.Audit.Model.AuditResult IsOkToFinalize(Test.AccessionOrder accessionOrder) { Audit.Model.AuditResult result = base.IsOkToFinalize(accessionOrder); if (result.Status == Audit.Model.AuditStatusEnum.OK) { this.AreTestResultsPresent(accessionOrder, result); } return(result); }
public override Audit.Model.AuditResult IsOkToAccept(AccessionOrder accessionOrder) { Audit.Model.AuditResult result = base.IsOkToAccept(accessionOrder); if (result.Status == Audit.Model.AuditStatusEnum.OK) { this.AreTestResultsPresent(accessionOrder, result); } return(result); }
public override YellowstonePathology.Business.Audit.Model.AuditResult IsOkToFinalize(Test.AccessionOrder accessionOrder) { Audit.Model.AuditResult result = base.IsOkToFinalize(accessionOrder); if (result.Status == Audit.Model.AuditStatusEnum.OK) { if (string.IsNullOrEmpty(this.m_Result) == true) { result.Status = Audit.Model.AuditStatusEnum.Failure; result.Message = UnableToFinal; } } return(result); }
public override YellowstonePathology.Business.Audit.Model.AuditResult IsOkToFinalize(Test.AccessionOrder accessionOrder) { Audit.Model.AuditResult auditResult = base.IsOkToFinalize(accessionOrder); if (auditResult.Status == Audit.Model.AuditStatusEnum.OK) { if (string.IsNullOrEmpty(this.m_ResultCode) == true) { auditResult.Status = Audit.Model.AuditStatusEnum.Failure; auditResult.Message = "This case cannot be finalized because the results have not been set."; } } return(auditResult); }
public virtual Audit.Model.AuditResult IsOkToSetResults(YellowstonePathology.Business.Test.AccessionOrder accessionOrder, YellowstonePathology.Business.Test.LynchSyndrome.PanelSetOrderLynchSyndromeEvaluation panelSetOrderLynchSyndromeEvaluation) { Audit.Model.AuditResult result = panelSetOrderLynchSyndromeEvaluation.IsOkToSetResults(); if (result.Status == Audit.Model.AuditStatusEnum.OK) { Rules.MethodResult hasIHCResult = this.HasFinalIHCResult(accessionOrder, panelSetOrderLynchSyndromeEvaluation); if (hasIHCResult.Success == false) { result.Status = Audit.Model.AuditStatusEnum.Failure; result.Message = hasIHCResult.Message; } } return(result); }
public override Audit.Model.AuditResult IsOkToSetResults(AccessionOrder accessionOrder, PanelSetOrderLynchSyndromeEvaluation panelSetOrderLynchSyndromeEvaluation) { Audit.Model.AuditResult result = base.IsOkToSetResults(accessionOrder, panelSetOrderLynchSyndromeEvaluation); if (result.Status == Audit.Model.AuditStatusEnum.OK) { Rules.MethodResult methResult = this.HasFinalMethResult(accessionOrder, panelSetOrderLynchSyndromeEvaluation); if (methResult.Success == false) { result.Status = Audit.Model.AuditStatusEnum.Failure; result.Message = methResult.Message; } } return(result); }
public override Audit.Model.AuditResult IsOkToAccept(AccessionOrder accessionOrder) { Audit.Model.AuditResult result = base.IsOkToAccept(accessionOrder); if (result.Status == Audit.Model.AuditStatusEnum.OK) { if (string.IsNullOrEmpty(this.Result) == true) { result.Status = Audit.Model.AuditStatusEnum.Failure; result.Message = UnableToAccept; } } return(result); }
public override Audit.Model.AuditResult IsOkToSetPreviousResults(PanelSetOrder panelSetOrder, AccessionOrder accessionOrder) { Audit.Model.AuditResult result = base.IsOkToSetPreviousResults(panelSetOrder, accessionOrder); if (result.Status == Audit.Model.AuditStatusEnum.OK) { EGFRMutationAnalysisTestOrder egfrMutationAnalysisTestOrder = (EGFRMutationAnalysisTestOrder)panelSetOrder; this.DoesFinalSummaryResultMatch(accessionOrder, egfrMutationAnalysisTestOrder.Result, result); if (result.Status == Audit.Model.AuditStatusEnum.Warning) { result.Message += AskSetPreviousResults; } } return(result); }
public override Audit.Model.AuditResult IsOkToSetPreviousResults(PanelSetOrder panelSetOrder, AccessionOrder accessionOrder) { Audit.Model.AuditResult result = base.IsOkToSetPreviousResults(panelSetOrder, accessionOrder); if (result.Status == Audit.Model.AuditStatusEnum.OK) { ROS1ByFISHTestOrder pso = (ROS1ByFISHTestOrder)panelSetOrder; this.DoesFinalSummaryResultMatch(accessionOrder, pso.Result, result); if (result.Status == Audit.Model.AuditStatusEnum.Warning) { result.Message += AskSetPreviousResults; } } return(result); }
public override Audit.Model.AuditResult IsOkToAccept(AccessionOrder accessionOrder) { Audit.Model.AuditResult result = base.IsOkToAccept(accessionOrder); if (result.Status == Audit.Model.AuditStatusEnum.OK) { if (string.IsNullOrEmpty(this.m_JAK2Exon1214Result) == true && string.IsNullOrEmpty(this.m_JAK2V617FResult) == true && string.IsNullOrEmpty(this.m_MPLResult) == true) { result.Status = Audit.Model.AuditStatusEnum.Failure; result.Message = "Unable to accept as the results have not been set."; } } return(result); }
public Audit.Model.AuditResult IsOkToSetResults() { Audit.Model.AuditResult result = new Audit.Model.AuditResult(); result.Status = Audit.Model.AuditStatusEnum.OK; if (this.LynchSyndromeEvaluationType == LSEType.NOTSET) { result.Status = Audit.Model.AuditStatusEnum.Failure; result.Message = "Results may not be set as the Indication is not selected."; } else if (this.Accepted == true) { result.Status = Audit.Model.AuditStatusEnum.Failure; result.Message = "Results may not be set as the results have been accepted."; } return(result); }
public override YellowstonePathology.Business.Audit.Model.AuditResult IsOkToFinalize(Test.AccessionOrder accessionOrder) { Audit.Model.AuditResult result = base.IsOkToFinalize(accessionOrder); if (result.Status == Audit.Model.AuditStatusEnum.OK) { if (string.IsNullOrEmpty(this.m_Result) == true) { result.Status = Audit.Model.AuditStatusEnum.Failure; result.Message = UnableToFinal; } } if (result.Status == Audit.Model.AuditStatusEnum.OK) { if (string.IsNullOrEmpty(this.Indication) == true) { result.Status = Audit.Model.AuditStatusEnum.Failure; result.Message = "The results cannot be finalized because the BRAF indicator is not set."; } } if (result.Status == Audit.Model.AuditStatusEnum.OK) { YellowstonePathology.Business.Test.KRASStandardReflex.KRASStandardReflexTest krasStandardReflexTest = new KRASStandardReflex.KRASStandardReflexTest(); if (accessionOrder.PanelSetOrderCollection.Exists(krasStandardReflexTest.PanelSetId, this.OrderedOnId, true) == false) { if (string.IsNullOrEmpty(this.TumorNucleiPercentage) == true) { result.Status = Audit.Model.AuditStatusEnum.Failure; result.Message = "This case cannot be finalized because the Tumor Nuclei Percent is not set."; } } } if (result.Status == Audit.Model.AuditStatusEnum.OK) { this.DoesFinalSummaryResultMatch(accessionOrder, this.m_Result, result); if (result.Status == Audit.Model.AuditStatusEnum.Warning) { result.Message += AskFinal; } } return(result); }
public override YellowstonePathology.Business.Audit.Model.AuditResult IsOkToFinalize(Test.AccessionOrder accessionOrder) { Audit.Model.AuditResult result = base.IsOkToFinalize(accessionOrder); if (result.Status == Audit.Model.AuditStatusEnum.OK) { if (string.IsNullOrEmpty(this.m_Result) == true) { result.Status = Audit.Model.AuditStatusEnum.Failure; result.Message = UnableToFinal + Environment.NewLine; } if (string.IsNullOrEmpty(this.m_Karyotype) == true) { result.Status = Audit.Model.AuditStatusEnum.Failure; result.Message += "This case cannot be finalized because the Karyotype has not been set."; } } return(result); }
public override Audit.Model.AuditResult IsOkToAccept(AccessionOrder accessionOrder) { Audit.Model.AuditResult result = base.IsOkToAccept(accessionOrder); if (result.Status == Audit.Model.AuditStatusEnum.OK) { if (string.IsNullOrEmpty(this.Result) == true) { result.Status = Audit.Model.AuditStatusEnum.Failure; result.Message = UnableToAccept + Environment.NewLine; } if (string.IsNullOrEmpty(this.m_Karyotype) == true) { result.Status = Audit.Model.AuditStatusEnum.Failure; result.Message += "This case cannot be accepted because the Karyotype has not been set."; } } return(result); }
public override Audit.Model.AuditResult IsOkToSetPreviousResults(PanelSetOrder panelSetOrder, AccessionOrder accessionOrder) { Audit.Model.AuditResult result = base.IsOkToSetPreviousResults(panelSetOrder, accessionOrder); if (result.Status == Audit.Model.AuditStatusEnum.OK) { this.AreComponentTestOrdersAccepted(accessionOrder, result); } /*if (result.Status == Audit.Model.AuditStatusEnum.OK) * { * this.DoComponentTestResultsMatchPreviousResults(accessionOrder, (EGFRToALKReflexAnalysisTestOrder)panelSetOrder, result); * if (result.Status == Audit.Model.AuditStatusEnum.Warning) * { * result.Message += AskSetPreviousResults; * } * }*/ return(result); }
public override AuditResult IsOkToFinalize(AccessionOrder accessionOrder) { AuditResult result = new Audit.Model.AuditResult(); result.Status = AuditStatusEnum.OK; YellowstonePathology.Business.Rules.MethodResult methodResult = IsOkToFinalize(); if (methodResult.Success == false) { result.Status = AuditStatusEnum.Failure; result.Message = methodResult.Message; } if (result.Status == AuditStatusEnum.OK) { result = base.IsOkToFinalize(accessionOrder); } return(result); }
public Audit.Model.AuditResult IsOkToFinalize(YellowstonePathology.Business.Test.AccessionOrder accessionOrder, PanelOrderCytology panelOrderToFinalize, YellowstonePathology.Business.User.SystemIdentity systemIdentity, YellowstonePathology.Business.Rules.ExecutionStatus executionStatus) { Audit.Model.AuditCollection auditCollection = new Audit.Model.AuditCollection(); auditCollection.Add(new Audit.Model.DistributionCanBeSetAudit(accessionOrder)); auditCollection.Add(new Audit.Model.CanFinalizeCytologyPanelOrderAudit(panelOrderToFinalize, this, accessionOrder, systemIdentity, executionStatus)); Audit.Model.AuditResult auditResult = auditCollection.Run2(); if (auditResult.Status == Audit.Model.AuditStatusEnum.Failure) { if (executionStatus.Halted == false) { executionStatus.AddMessage(auditResult.Message, true); executionStatus.ShowMessage = true; executionStatus.Halted = true; } } return(auditResult); }
public override Audit.Model.AuditResult IsOkToAccept(AccessionOrder accessionOrder) { Audit.Model.AuditResult result = base.IsOkToAccept(accessionOrder); if (result.Status == Audit.Model.AuditStatusEnum.OK) { if (string.IsNullOrEmpty(this.Result) == true) { result.Status = Audit.Model.AuditStatusEnum.Failure; result.Message = UnableToAccept; } } if (result.Status == Audit.Model.AuditStatusEnum.OK) { this.DoesFinalSummaryResultMatch(accessionOrder, this.m_Result, result); if (result.Status == Audit.Model.AuditStatusEnum.Warning) { result.Message += AskAccept; } } return(result); }
private void AreTestResultsPresent(AccessionOrder accessionOrder, Audit.Model.AuditResult result) { YellowstonePathology.Business.Test.PDL122C3.PDL122C3Test pdl122C3Test = new PDL122C3.PDL122C3Test(); YellowstonePathology.Business.Test.EGFRMutationAnalysis.EGFRMutationAnalysisTest egfrMutationAnalysisTest = new YellowstonePathology.Business.Test.EGFRMutationAnalysis.EGFRMutationAnalysisTest(); YellowstonePathology.Business.Test.ROS1ByFISH.ROS1ByFISHTest ros1ByfishTest = new ROS1ByFISH.ROS1ByFISHTest(); YellowstonePathology.Business.Test.ALKForNSCLCByFISH.ALKForNSCLCByFISHTest alkTest = new ALKForNSCLCByFISH.ALKForNSCLCByFISHTest(); YellowstonePathology.Business.Test.BRAFMutationAnalysis.BRAFMutationAnalysisTest brafTest = new BRAFMutationAnalysis.BRAFMutationAnalysisTest(); YellowstonePathology.Business.Test.PDL1SP142.PDL1SP142Test pdl1SP142Test = new PDL1SP142.PDL1SP142Test(); if (accessionOrder.PanelSetOrderCollection.Exists(pdl122C3Test.PanelSetId) == true) { if (string.IsNullOrEmpty(this.m_PDL122C3Result) == true) { result.Status = Audit.Model.AuditStatusEnum.Failure; result.Message += NotFilledMessage("PDL122C3Result"); } } if (accessionOrder.PanelSetOrderCollection.Exists(egfrMutationAnalysisTest.PanelSetId) == true) { if (string.IsNullOrEmpty(this.m_EGFRMutationAnalysisResult) == true) { result.Status = Audit.Model.AuditStatusEnum.Failure; result.Message += NotFilledMessage("EGFRMutationAnalysisResult"); } } if (accessionOrder.PanelSetOrderCollection.Exists(ros1ByfishTest.PanelSetId) == true) { if (string.IsNullOrEmpty(this.m_ROS1ByFISHResult) == true) { result.Status = Audit.Model.AuditStatusEnum.Failure; result.Message += NotFilledMessage("ROS1ByFISHResult"); } } if (accessionOrder.PanelSetOrderCollection.Exists(alkTest.PanelSetId) == true) { if (string.IsNullOrEmpty(this.m_ALKForNSCLCByFISHResult) == true) { result.Status = Audit.Model.AuditStatusEnum.Failure; result.Message += NotFilledMessage("ALKForNSCLCByFISHResult"); } } if (accessionOrder.PanelSetOrderCollection.Exists(brafTest.PanelSetId) == true) { if (string.IsNullOrEmpty(this.m_BRAFMutationAnalysisResult) == true) { result.Status = Audit.Model.AuditStatusEnum.Failure; result.Message += NotFilledMessage("BRAFMutationAnalysisResult"); } } if (accessionOrder.PanelSetOrderCollection.Exists(pdl1SP142Test.PanelSetId) == true) { if (string.IsNullOrEmpty(this.m_PDL1SP142Result) == true) { result.Status = Audit.Model.AuditStatusEnum.Failure; result.Message += NotFilledMessage("PDL1SP142Result"); } } }
private void AreComponentTestOrdersFinal(AccessionOrder accessionOrder, Audit.Model.AuditResult result) { YellowstonePathology.Business.Test.PDL122C3.PDL122C3Test pdl122C3Test = new PDL122C3.PDL122C3Test(); YellowstonePathology.Business.Test.EGFRMutationAnalysis.EGFRMutationAnalysisTest egfrMutationAnalysisTest = new YellowstonePathology.Business.Test.EGFRMutationAnalysis.EGFRMutationAnalysisTest(); YellowstonePathology.Business.Test.ROS1ByFISH.ROS1ByFISHTest ros1ByfishTest = new ROS1ByFISH.ROS1ByFISHTest(); YellowstonePathology.Business.Test.ALKForNSCLCByFISH.ALKForNSCLCByFISHTest alkTest = new ALKForNSCLCByFISH.ALKForNSCLCByFISHTest(); YellowstonePathology.Business.Test.BRAFMutationAnalysis.BRAFMutationAnalysisTest brafTest = new BRAFMutationAnalysis.BRAFMutationAnalysisTest(); YellowstonePathology.Business.Test.PDL1SP142.PDL1SP142Test pdl1SP142Test = new PDL1SP142.PDL1SP142Test(); if (accessionOrder.PanelSetOrderCollection.Exists(pdl122C3Test.PanelSetId) == true) { Test.PDL122C3.PDL122C3TestOrder pdl122C3TestOrder = (PDL122C3.PDL122C3TestOrder)accessionOrder.PanelSetOrderCollection.GetPanelSetOrder(pdl122C3Test.PanelSetId); if (pdl122C3TestOrder.Final == false) { result.Status = Audit.Model.AuditStatusEnum.Failure; result.Message += NotFinaledMessage(pdl122C3TestOrder.PanelSetName); } } if (accessionOrder.PanelSetOrderCollection.Exists(egfrMutationAnalysisTest.PanelSetId) == true) { Test.EGFRMutationAnalysis.EGFRMutationAnalysisTestOrder egfrMutationAnalysisTestOrder = (EGFRMutationAnalysis.EGFRMutationAnalysisTestOrder)accessionOrder.PanelSetOrderCollection.GetPanelSetOrder(egfrMutationAnalysisTest.PanelSetId); if (egfrMutationAnalysisTestOrder.Final == false) { result.Status = Audit.Model.AuditStatusEnum.Failure; result.Message += NotFinaledMessage(egfrMutationAnalysisTestOrder.PanelSetName); } } if (accessionOrder.PanelSetOrderCollection.Exists(ros1ByfishTest.PanelSetId) == true) { Test.ROS1ByFISH.ROS1ByFISHTestOrder ros1ByFISHTestOrder = (ROS1ByFISH.ROS1ByFISHTestOrder)accessionOrder.PanelSetOrderCollection.GetPanelSetOrder(ros1ByfishTest.PanelSetId); if (ros1ByFISHTestOrder.Final == false) { result.Status = Audit.Model.AuditStatusEnum.Failure; result.Message += NotFinaledMessage(ros1ByFISHTestOrder.PanelSetName); } } if (accessionOrder.PanelSetOrderCollection.Exists(alkTest.PanelSetId) == true) { Test.ALKForNSCLCByFISH.ALKForNSCLCByFISHTestOrder alkTestOrder = (ALKForNSCLCByFISH.ALKForNSCLCByFISHTestOrder)accessionOrder.PanelSetOrderCollection.GetPanelSetOrder(alkTest.PanelSetId); if (alkTestOrder.Final == false) { result.Status = Audit.Model.AuditStatusEnum.Failure; result.Message += NotFinaledMessage(alkTestOrder.PanelSetName); } } if (accessionOrder.PanelSetOrderCollection.Exists(brafTest.PanelSetId) == true) { Test.BRAFMutationAnalysis.BRAFMutationAnalysisTestOrder brafTestOrder = (BRAFMutationAnalysis.BRAFMutationAnalysisTestOrder)accessionOrder.PanelSetOrderCollection.GetPanelSetOrder(brafTest.PanelSetId); if (brafTestOrder.Final == false) { result.Status = Audit.Model.AuditStatusEnum.Failure; result.Message += NotFinaledMessage(brafTestOrder.PanelSetName); } } if (accessionOrder.PanelSetOrderCollection.Exists(pdl1SP142Test.PanelSetId) == true) { Test.PDL1SP142.PDL1SP142TestOrder pdl1SP142TestOrder = (PDL1SP142.PDL1SP142TestOrder)accessionOrder.PanelSetOrderCollection.GetPanelSetOrder(pdl1SP142Test.PanelSetId); if (pdl1SP142TestOrder.Final == false) { result.Status = Audit.Model.AuditStatusEnum.Failure; result.Message += NotFinaledMessage(pdl1SP142TestOrder.PanelSetName); } } }
private void DoComponentTestResultsMatchPreviousResults(AccessionOrder accessionOrder, EGFRToALKReflexAnalysisTestOrder panelSetOrder, Audit.Model.AuditResult result) { YellowstonePathology.Business.Test.PDL122C3.PDL122C3Test pdl122C3Test = new PDL122C3.PDL122C3Test(); YellowstonePathology.Business.Test.EGFRMutationAnalysis.EGFRMutationAnalysisTest egfrMutationAnalysisTest = new YellowstonePathology.Business.Test.EGFRMutationAnalysis.EGFRMutationAnalysisTest(); YellowstonePathology.Business.Test.ROS1ByFISH.ROS1ByFISHTest ros1ByfishTest = new ROS1ByFISH.ROS1ByFISHTest(); YellowstonePathology.Business.Test.ALKForNSCLCByFISH.ALKForNSCLCByFISHTest alkTest = new ALKForNSCLCByFISH.ALKForNSCLCByFISHTest(); YellowstonePathology.Business.Test.BRAFMutationAnalysis.BRAFMutationAnalysisTest brafTest = new BRAFMutationAnalysis.BRAFMutationAnalysisTest(); YellowstonePathology.Business.Test.PDL1SP142.PDL1SP142Test pdl1SP142Test = new PDL1SP142.PDL1SP142Test(); if (accessionOrder.PanelSetOrderCollection.Exists(pdl122C3Test.PanelSetId) == true) { Test.PDL122C3.PDL122C3TestOrder pdl122C3TestOrder = (PDL122C3.PDL122C3TestOrder)accessionOrder.PanelSetOrderCollection.GetPanelSetOrder(pdl122C3Test.PanelSetId); if (pdl122C3TestOrder.Result != panelSetOrder.PDL122C3Result) { result.Status = Audit.Model.AuditStatusEnum.Warning; result.Message += MismatchMessage(pdl122C3TestOrder.PanelSetName); } } if (accessionOrder.PanelSetOrderCollection.Exists(egfrMutationAnalysisTest.PanelSetId) == true) { Test.EGFRMutationAnalysis.EGFRMutationAnalysisTestOrder egfrMutationAnalysisTestOrder = (EGFRMutationAnalysis.EGFRMutationAnalysisTestOrder)accessionOrder.PanelSetOrderCollection.GetPanelSetOrder(egfrMutationAnalysisTest.PanelSetId); if (egfrMutationAnalysisTestOrder.Result != panelSetOrder.EGFRMutationAnalysisResult) { result.Status = Audit.Model.AuditStatusEnum.Warning; result.Message += MismatchMessage(egfrMutationAnalysisTestOrder.PanelSetName); } } if (accessionOrder.PanelSetOrderCollection.Exists(ros1ByfishTest.PanelSetId) == true) { Test.ROS1ByFISH.ROS1ByFISHTestOrder ros1ByFISHTestOrder = (ROS1ByFISH.ROS1ByFISHTestOrder)accessionOrder.PanelSetOrderCollection.GetPanelSetOrder(ros1ByfishTest.PanelSetId); if (ros1ByFISHTestOrder.Result != panelSetOrder.ROS1ByFISHResult) { result.Status = Audit.Model.AuditStatusEnum.Warning; result.Message += MismatchMessage(ros1ByFISHTestOrder.PanelSetName); } } if (accessionOrder.PanelSetOrderCollection.Exists(alkTest.PanelSetId) == true) { Test.ALKForNSCLCByFISH.ALKForNSCLCByFISHTestOrder alkTestOrder = (ALKForNSCLCByFISH.ALKForNSCLCByFISHTestOrder)accessionOrder.PanelSetOrderCollection.GetPanelSetOrder(alkTest.PanelSetId); if (alkTestOrder.Result != panelSetOrder.ALKForNSCLCByFISHResult) { result.Status = Audit.Model.AuditStatusEnum.Warning; result.Message += MismatchMessage(alkTestOrder.PanelSetName); } } if (accessionOrder.PanelSetOrderCollection.Exists(brafTest.PanelSetId) == true) { Test.BRAFMutationAnalysis.BRAFMutationAnalysisTestOrder brafTestOrder = (BRAFMutationAnalysis.BRAFMutationAnalysisTestOrder)accessionOrder.PanelSetOrderCollection.GetPanelSetOrder(brafTest.PanelSetId); if (brafTestOrder.Result != panelSetOrder.BRAFMutationAnalysisResult) { result.Status = Audit.Model.AuditStatusEnum.Warning; result.Message += MismatchMessage(brafTestOrder.PanelSetName); } } if (accessionOrder.PanelSetOrderCollection.Exists(pdl1SP142Test.PanelSetId) == true) { Test.PDL1SP142.PDL1SP142TestOrder pdl1SP142TestOrder = (PDL1SP142.PDL1SP142TestOrder)accessionOrder.PanelSetOrderCollection.GetPanelSetOrder(pdl1SP142Test.PanelSetId); if (pdl1SP142TestOrder.Result != panelSetOrder.PDL1SP142Result) { result.Status = Audit.Model.AuditStatusEnum.Warning; result.Message += MismatchMessage(pdl1SP142TestOrder.PanelSetName); } } }
private void DoesFinalSummaryResultMatch(AccessionOrder accessionOrder, string result, Audit.Model.AuditResult auditResult) { Business.Test.EGFRToALKReflexAnalysis.EGFRToALKReflexAnalysisTest egfrToALKReflexAnalysisTest = new EGFRToALKReflexAnalysis.EGFRToALKReflexAnalysisTest(); if (accessionOrder.PanelSetOrderCollection.Exists(egfrToALKReflexAnalysisTest.PanelSetId) == true) { Business.Test.EGFRToALKReflexAnalysis.EGFRToALKReflexAnalysisTestOrder egfrToALKReflexAnalysisTestOrder = (EGFRToALKReflexAnalysis.EGFRToALKReflexAnalysisTestOrder)accessionOrder.PanelSetOrderCollection.GetPanelSetOrder(egfrToALKReflexAnalysisTest.PanelSetId); egfrToALKReflexAnalysisTestOrder.DoesROS1ByFISHResultMatch(result, auditResult); } }
public Audit.Model.AuditResult CheckFinaledUnsatResultWithAssociatedCases(YellowstonePathology.Business.Test.AccessionOrder accessionOrder) { Audit.Model.AuditResult result = new Audit.Model.AuditResult(); result.Status = Audit.Model.AuditStatusEnum.OK; StringBuilder message = new StringBuilder(); message.Append("The previously reported "); StringBuilder comment = new StringBuilder(); comment.Append("Because the specimen is unsatisfactory for evaluation, the previously reported "); if (this.ScreeningType.ToUpper() == "FINAL RESULT" && Business.User.SystemIdentity.Instance.User.IsUserInRole(User.SystemUserRoleDescriptionEnum.Pathologist) == true) { if (YellowstonePathology.Business.Cytology.Model.CytologyResultCode.IsResultCodeUnsat(this.ResultCode) == true) { bool hasHPVNeg = false; bool hasNGCTNeg = false; bool hasTrichNeg = false; YellowstonePathology.Business.Test.HPV.HPVTest panelSetHPV = new YellowstonePathology.Business.Test.HPV.HPVTest(); YellowstonePathology.Business.Test.NGCT.NGCTTest panelSetNGCT = new YellowstonePathology.Business.Test.NGCT.NGCTTest(); YellowstonePathology.Business.Test.Trichomonas.TrichomonasTest panelSetTrichomonas = new YellowstonePathology.Business.Test.Trichomonas.TrichomonasTest(); if (accessionOrder.PanelSetOrderCollection.Exists(panelSetHPV.PanelSetId) == true) { YellowstonePathology.Business.Test.HPV.HPVTestOrder hpvTestOrder = (HPV.HPVTestOrder)accessionOrder.PanelSetOrderCollection.GetPanelSetOrder(panelSetHPV.PanelSetId); if (hpvTestOrder.Final == true && hpvTestOrder.Result == HPV.HPVResult.NegativeResult) { hasHPVNeg = true; message.Append(panelSetHPV.PanelSetName); comment.Append(panelSetHPV.PanelSetName + " (YPI report # " + hpvTestOrder.ReportNo + ")"); } } if (accessionOrder.PanelSetOrderCollection.Exists(panelSetNGCT.PanelSetId) == true) { YellowstonePathology.Business.Test.NGCT.NGCTTestOrder ngctTestOrder = (NGCT.NGCTTestOrder)accessionOrder.PanelSetOrderCollection.GetPanelSetOrder(panelSetNGCT.PanelSetId); if (ngctTestOrder.Final == true && ngctTestOrder.NGResultCode == NGCT.NGCTResult.NGNegativeResultCode && ngctTestOrder.CTResultCode == NGCT.NGCTResult.CTNegativeResultCode) { hasNGCTNeg = true; if (hasHPVNeg == true) { message.Append(", "); comment.Append(", "); } message.AppendLine(panelSetNGCT.PanelSetName); comment.Append(panelSetNGCT.PanelSetName + " (YPI report # " + ngctTestOrder.ReportNo + ")"); } } if (accessionOrder.PanelSetOrderCollection.Exists(panelSetTrichomonas.PanelSetId) == true) { YellowstonePathology.Business.Test.Trichomonas.TrichomonasTestOrder trichTestOrder = (Trichomonas.TrichomonasTestOrder)accessionOrder.PanelSetOrderCollection.GetPanelSetOrder(panelSetTrichomonas.PanelSetId); if (trichTestOrder.Final == true && trichTestOrder.ResultCode == "TRCHMNSNEG") { hasTrichNeg = true; if (hasHPVNeg == true || hasNGCTNeg == true) { message.Append(", "); comment.Append(", "); } message.AppendLine(panelSetTrichomonas.PanelSetName); comment.Append(panelSetTrichomonas.PanelSetName + " (YPI report # " + trichTestOrder.ReportNo + ")"); } } if (hasHPVNeg || hasNGCTNeg || hasTrichNeg) { result.Status = Audit.Model.AuditStatusEnum.Failure; if ((hasHPVNeg == true && (hasNGCTNeg == true || hasTrichNeg == true)) || (hasNGCTNeg == true && hasTrichNeg == true)) { message.Append(" tests for this sample are NEGATIVE. As the final Pap interpretation is UNSATIFACTORY, the results of the molecular "); message.AppendLine("tests may not be accurate. The following comment will be inserted in the report:"); comment.Append(" test results"); } else { message.Append(" test for this sample is NEGATIVE. As the final Pap interpretation is UNSATIFACTORY, the results of the molecular "); message.AppendLine("test may not be accurate. The following comment will be inserted in the report:"); comment.Append(" test result"); } message.AppendLine(); message.Append("Comment: "); comment.Append(" may not be reliable. Repeat molecular analysis and/or Pap test may be warranted. Recommend clinical correlation."); message.AppendLine(comment.ToString()); if (string.IsNullOrEmpty(this.ReportComment) == false) { this.ReportComment += Environment.NewLine + Environment.NewLine; } this.ReportComment += comment.ToString(); result.Message = message.ToString(); } } } return(result); }
public virtual YellowstonePathology.Business.Audit.Model.AuditResult IsOkToFinalize(Test.AccessionOrder accessionOrder) { YellowstonePathology.Business.Audit.Model.AuditResult result = new Audit.Model.AuditResult(); result.Status = Audit.Model.AuditStatusEnum.OK; YellowstonePathology.Business.Audit.Model.AuditCollection auditCollection = new Audit.Model.AuditCollection(); auditCollection.Add(new Audit.Model.FinalizedAudit(this)); auditCollection.Add(new Audit.Model.MRNAudit(accessionOrder)); auditCollection.Add(new Audit.Model.AccountNoAudit(accessionOrder)); auditCollection.Add(new Audit.Model.DistributionCanBeSetAudit(accessionOrder)); result = auditCollection.Run2(); return result; }