Example #1
0
 public void AddOpsForRead(ReadNumber num, StitchableItem ops)
 {
     if (num == ReadNumber.Read1)
     {
         R1OpsCount++;
         R1Ops.Add(ops);
     }
     else
     {
         R2OpsCount++;
         R2Ops.Add(ops);
     }
 }
 public void AddOpsForRead(ReadNumber num, StitchableItem ops)
 {
     if (num == ReadNumber.Read1)
     {
         R1OpsCount++;
         R1Ops.Add(ops);
         if (CigarExtensions.IsReferenceSpan(ops.CigarOp))
         {
             R1HasReferenceSpan = true;
         }
     }
     else
     {
         R2OpsCount++;
         R2Ops.Add(ops);
         if (CigarExtensions.IsReferenceSpan(ops.CigarOp))
         {
             R2HasReferenceSpan = true;
         }
     }
 }