/// <summary>
///
/// </summary>
/// <param name="name"></param>
/// <param name="pmidListFromXml"></param>
override public bool FillQueryDataTables(string name, XmlNodeList pmidListFromXml)
{
if (name == "" && pmidListFromXml.Count == 0)
{
return(false);
}
try
{
// T_Protein and T_ProteinList
DataRow rowProtein = null;
if (ProteinFromUser != null)
{
if (!(Dictionary.TryGetValue(ProteinFromUser, out rowProtein)))
{
// not exist -> create new row of T_Protein and fill it.
rowProtein = ProteinDataTable.NewRow();
rowProtein["ProteinID"] = ProteinID++;
rowProtein["Protein"] = ProteinFromUser;
// add the row into the T_Protein data table and the dictionary
ProteinDataTable.Rows.Add(rowProtein);
Dictionary.Add(ProteinFromUser, rowProtein);
}
// No matter protein exists in the dictionary, need to put in the list
DataRow rowProteinList = ProteinListDataTable.NewRow();
rowProteinList["ProteinListID"] = ProteinListID;
rowProteinList["QuerySessionID"] = QuerySessionID;
rowProteinList["ProteinID"] = rowProtein["Protein"];
ProteinListDataTable.Rows.Add(rowProteinList);
}
// T_Organism
DataRow rowOrganism = null;
if ((OrganismFromUser != null) && (!(Dictionary.TryGetValue(OrganismFromUser, out rowOrganism))))
{
// not exist -> create new row of T_Organism and fill it.
rowOrganism = OrganismDataTable.NewRow();
rowOrganism["OrganismID"] = OrganismID++;
rowOrganism["Organism"] = OrganismFromUser;
// add the row into T_Organism data table and the dictionary
OrganismDataTable.Rows.Add(rowOrganism);
Dictionary.Add(OrganismFromUser, rowOrganism);
}
// T_Keyword
DataRow rowKeyword = null;
if ((KeywordFromUser != null) && (!(Dictionary.TryGetValue(KeywordFromUser, out rowKeyword))))
{
// not exist -> create new row of T_Keyword and fill it
rowKeyword = KeywordDataTable.NewRow();
rowKeyword["KeywordID"] = KeywordID++;
rowKeyword["Keyword"] = KeywordFromUser;
// add the row into T_Keyword data table and the dictionary.
KeywordDataTable.Rows.Add(rowKeyword);
Dictionary.Add(KeywordFromUser, rowKeyword);
}
// The rest of T_Query
DataRow rowQuery = QueryDataTable.NewRow();
rowQuery["QueryID"] = QueryID++;
rowQuery["Name"] = name; // name = protein + organism + keyword
//rowQuery["QueryStartTime"]=;
//rowQuery["QueryEndTime"]=;
rowQuery["ProteinID"] = rowProtein["ProteinID"]; //.ToString();
rowQuery["OrganismID"] = rowOrganism["OrganismID"]; //.ToString();
rowQuery["Keyword"] = rowKeyword["KeywordID"]; //.ToString(); // keywordListID = QueryID because one query has one keywordList
rowQuery["ResultCount"] = ArticleCount; // new count from the xml string
// Add the row of T_Query into the T_Query datatable and the dictionary
QueryDataTable.Rows.Add(rowQuery);
Dictionary.Add(name, rowQuery);
// T_QueryArticles
foreach (XmlNode pmid in pmidListFromXml)
{
// create the row of QueryArticles and fill it.
DataRow rowQueryArticles = QueryArticlesDataTable.NewRow();
rowQueryArticles["QueryArticleID"] = QueryArticleID++;
rowQueryArticles["QueryID"] = rowQuery["QueryID"];
rowQueryArticles["PMID"] = pmid.InnerText;
// add pmid into ldlist and the row into datatable
IdList.Add(pmid.InnerText);
QueryArticlesDataTable.Rows.Add(rowQueryArticles);
}
// T_QuerySession
// create new row, fill information, and add the row into the QuerySession data table
DataRow rowQuerySession = QuerySessionDataTable.NewRow();
rowQuerySession["QuerySessionID"] = QuerySessionID;
rowQuerySession["QueryID"] = rowQuery["QueryID"];
rowQuerySession["ProteinListID"] = rowQuery["ProteinID"];
rowQuerySession["DateTime"] = DateTime.Now;
QuerySessionDataTable.Rows.Add(rowQuerySession);
}
catch (Exception exception)
{
Console.WriteLine(exception.Message);
}
return(true);
}
public Step3(IWebDriver webDriver) : base(webDriver)
{
this.webDriver = webDriver;
PODriver.GotoURL(webDriver, PageName);
proteinDataTable = new ProteinDataTable(ProteinSizerData);
}
