/// <summary>
/// Resize image depending on a reference image.
/// </summary>
/// <param name="toResize">image</param>
/// <param name="referenceImage">reference image</param>
/// <returns>resampled image</returns>
public static sitk.Image ResizeImage(sitk.Image toResize, sitk.Image referenceImage)
{
if (toResize.GetWidth() == referenceImage.GetWidth() && toResize.GetHeight() == referenceImage.GetHeight())
{
return(toResize);
}
uint width = toResize.GetWidth() < referenceImage.GetWidth() ? referenceImage.GetWidth() : toResize.GetWidth();
uint height = toResize.GetHeight() < referenceImage.GetHeight() ? referenceImage.GetHeight() : toResize.GetHeight();
sitk.VectorUInt32 vec = new sitk.VectorUInt32();
vec.Add(width);
vec.Add(height);
sitk.ResampleImageFilter resampleFilter = new sitk.ResampleImageFilter();
resampleFilter.SetSize(vec);
resampleFilter.SetOutputOrigin(toResize.GetOrigin());
resampleFilter.SetOutputDirection(toResize.GetDirection());
resampleFilter.SetOutputSpacing(toResize.GetSpacing());
resampleFilter.SetOutputPixelType(referenceImage.GetPixelID());
resampleFilter.SetDefaultPixelValue(255.0);
sitk.Image resultImage = resampleFilter.Execute(toResize);
return(resultImage);
}
/// <summary>
/// Resample image output pixel type.
/// </summary>
/// <param name="img">image</param>
/// <param name="pixelIDValue">output pixel type</param>
/// <returns>sitk image</returns>
public static sitk.Image ResampleImage(sitk.Image img, sitk.PixelIDValueEnum pixelIDValue)
{
sitk.ResampleImageFilter resampleImageFilter = new sitk.ResampleImageFilter();
resampleImageFilter.SetOutputPixelType(pixelIDValue);
resampleImageFilter.SetOutputOrigin(img.GetOrigin());
resampleImageFilter.SetOutputDirection(img.GetDirection());
resampleImageFilter.SetOutputSpacing(img.GetSpacing());
return(resampleImageFilter.Execute(img));
}
/// <summary>
/// Create a displacement field image by the transformation parameters.
/// (Save as .mhd afterwards)
/// </summary>
/// <param name="image">image</param>
/// <param name="transform">transform parameters</param>
/// <returns>displacement field image</returns>
public static sitk.Image GetDisplacementFieldFromTransformation(sitk.Image image, sitk.Transform transform)
{
sitk.TransformToDisplacementFieldFilter filter = new sitk.TransformToDisplacementFieldFilter();
filter.SetReferenceImage(image);
filter.SetOutputPixelType(sitk.PixelIDValueEnum.sitkUInt8);
filter.SetOutputOrigin(image.GetOrigin());
filter.SetOutputDirection(image.GetDirection());
filter.SetOutputSpacing(image.GetSpacing());
return(filter.Execute(transform));
}
/// <summary>
/// Interpolate image by interpolation type and output pixel type.
/// </summary>
/// <param name="img"></param>
/// <param name="interpolator"></param>
/// <param name="pixelIDValueEnum"></param>
/// <returns>interpolated image</returns>
public static sitk.Image InterpolateImage(sitk.Image img, sitk.InterpolatorEnum interpolator, sitk.PixelIDValueEnum pixelIDValueEnum, double defaultPixelType = 0.0)
{
sitk.ResampleImageFilter resampleImageFilter = new sitk.ResampleImageFilter();
resampleImageFilter.SetSize(img.GetSize());
resampleImageFilter.SetOutputOrigin(img.GetOrigin());
resampleImageFilter.SetOutputDirection(img.GetDirection());
resampleImageFilter.SetOutputSpacing(img.GetSpacing());
resampleImageFilter.SetInterpolator(interpolator);
resampleImageFilter.SetOutputPixelType(pixelIDValueEnum);
resampleImageFilter.SetDefaultPixelValue(defaultPixelType);
return(resampleImageFilter.Execute(img));
}
/// <summary>
/// Resize image by width and height and set output pixel type.
/// </summary>
/// <param name="img">input image</param>
/// <param name="width">width</param>
/// <param name="height">height</param>
/// <param name="pixelType">output pixel type</param>
/// <returns>resampled image</returns>
public static sitk.Image ResizeImage(sitk.Image img, uint width, uint height, sitk.PixelIDValueEnum pixelType)
{
sitk.VectorUInt32 vec = new sitk.VectorUInt32();
vec.Add(width);
vec.Add(height);
sitk.ResampleImageFilter resampleFilter = new sitk.ResampleImageFilter();
resampleFilter.SetSize(vec);
resampleFilter.SetOutputOrigin(img.GetOrigin());
resampleFilter.SetOutputDirection(img.GetDirection());
resampleFilter.SetOutputSpacing(img.GetSpacing());
resampleFilter.SetOutputPixelType(pixelType);
resampleFilter.SetDefaultPixelValue(255.0);
sitk.Image resultImage = resampleFilter.Execute(img);
img.Dispose();
return(resultImage);
}
/// <summary>
/// Resize image by new width and height.
/// </summary>
/// <param name="image">input image</param>
/// <param name="newWidth">width</param>
/// <param name="newHeight">height</param>
/// <returns>resized image</returns>
public static sitk.Image ResizeImage(sitk.Image image, uint newWidth, uint newHeight)
{
if (image.GetWidth() == newWidth && image.GetHeight() == newHeight)
{
return(image);
}
sitk.VectorUInt32 vec = new sitk.VectorUInt32();
vec.Add(newWidth);
vec.Add(newHeight);
sitk.ResampleImageFilter resampleFilter = new sitk.ResampleImageFilter();
resampleFilter.SetSize(vec);
resampleFilter.SetOutputOrigin(image.GetOrigin());
resampleFilter.SetOutputDirection(image.GetDirection());
resampleFilter.SetOutputSpacing(image.GetSpacing());
resampleFilter.SetOutputPixelType(image.GetPixelID());
resampleFilter.SetDefaultPixelValue(255.0);
sitk.Image resultImage = resampleFilter.Execute(image);
return(resultImage);
}