/// <summary>
/// Set peak ID
/// </summary>
/// <param name="dbData">DB data</param>
/// <param name="item">File data item</param>
/// <returns>error code</returns>
private SIMCA_READ_ERR_CODE SetPeakId(SimcaDbData dbData, SimcaDataItem item)
{
if (this.DataType != SIMCA_DATA_TYPE.SCORE_PLOT)
{
item.PeakId = -1;
if (this.HasRt && _secondaryIdIndexList.Count() >= 2)
{
double rt, mz;
if (!item.TryGetDoubleValue(_secondaryIdIndexList[0], out rt))
{
return(SIMCA_READ_ERR_CODE.NG_FORMAT);
}
if (!item.TryGetDoubleValue(_secondaryIdIndexList[1], out mz))
{
return(SIMCA_READ_ERR_CODE.NG_FORMAT);
}
item.PeakId = dbData.FindPeakId(rt, mz);
}
else if (!this.HasRt && _secondaryIdIndexList.Count() >= 1)
{
double mz;
if (!item.TryGetDoubleValue(_secondaryIdIndexList[0], out mz))
{
return(SIMCA_READ_ERR_CODE.NG_FORMAT);
}
item.PeakId = dbData.FindPeakId(mz);
}
}
return(SIMCA_READ_ERR_CODE.OK);
}
/// <summary>
/// Check skip data
/// </summary>
/// <param name="dbData">DB data</param>
/// <param name="item">File data item</param>
/// <returns>error code</returns>
private SIMCA_READ_ERR_CODE CheckSkipData(SimcaDbData dbData, SimcaDataItem item)
{
if (this.DataType == SIMCA_DATA_TYPE.SCORE_PLOT)
{
return(SIMCA_READ_ERR_CODE.OK);
}
double dummy;
int count = 0;
foreach (int index in _secondaryIdIndexList)
{
if (!item.TryGetDoubleValue(index, out dummy))
{
return(SIMCA_READ_ERR_CODE.SKIP);
}
count++;
if (count >= 2)
{
break;
}
}
foreach (int index in _dataIndexList)
{
if (!item.TryGetDoubleValue(index, out dummy))
{
return(SIMCA_READ_ERR_CODE.SKIP);
}
if (this.DataType == SIMCA_DATA_TYPE.S_PLOT)
{
if (!item.TryGetDoubleValue(index + 1, out dummy))
{
return(SIMCA_READ_ERR_CODE.SKIP);
}
}
}
return(SIMCA_READ_ERR_CODE.OK);
}
