public void LoadSequenceData(string path,
int datasetID,
IDatabaseSearchSequenceDAO databaseSequenceCache)
{
IMageSink sink = null;
if (path.ToLower().EndsWith("fht.txt"))
{
UpdateStatus("First Hit File MAGE Sink created. ");
var sequest = new SequestFirstHitSink(databaseSequenceCache);
sequest.DatasetID = datasetID;
sink = sequest;
}
else
{
UpdateStatus("File type is not supported for this kind of sequence data. ");
return;
}
var reader = new DelimitedFileReader();
reader.Delimiter = "\t";
reader.FilePath = path;
var pipeline = ProcessingPipeline.Assemble("PlainFactors", reader, sink);
pipeline.RunRoot(null);
sink.CommitChanges();
}
public void LoadSequenceData(string path,
int datasetID,
IDatabaseSearchSequenceDAO databaseSequenceCache)
{
IMageSink sink = null;
if (path.ToLower().EndsWith("fht.txt"))
{
UpdateStatus("First Hit File MAGE Sink created. ");
var sequest = new SequestFirstHitSink(databaseSequenceCache);
sequest.DatasetID = datasetID;
sink = sequest;
}
else
{
UpdateStatus("File type is not supported for this kind of sequence data. ");
return;
}
var reader = new DelimitedFileReader();
reader.Delimiter = "\t";
reader.FilePath = path;
var pipeline = ProcessingPipeline.Assemble("PlainFactors", reader, sink);
pipeline.RunRoot(null);
sink.CommitChanges();
}
